Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: IGLL1 Sequence: fasta or formatted (84aa) NCBI GI: 23110980
Description:

immunoglobulin lambda-like polypeptide 1 isoform b precursor

Referenced in:

B cells

Other entries for this name:
alt prot [213aa] immunoglobulin lambda-like polypeptide 1 isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5          8           2
 C cysteine            0.0          0           0
 D aspartate           0.0          0           0
 E glutamate           2.4          2           1
 F phenylalanine       0.0          0           0
 G glycine            17.9         15           2
 H histidine           3.6          3           1
 I isoleucine          0.0          0           0
 K lysine              0.0          0           0
 L leucine            15.5         13           4
 M methionine          1.2          1           1
 N asparagine          1.2          1           1
 P proline            11.9         10           1
 Q glutamine           4.8          4           1
 R arginine           10.7          9           1
 S serine             10.7          9           2
 T threonine           3.6          3           1
 V valine              4.8          4           2
 W tryptophan          2.4          2           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   immunoglobulin lambda-like polypeptide 1 isoform b p... 
IGLL1                 0.793   immunoglobulin lambda-like polypeptide 1 isoform a p...
LOC728650             0.053   PREDICTED: hypothetical protein 
DDN                   0.047   dendrin 
LENG9                 0.047   leukocyte receptor cluster (LRC) member 9 
LOC728650             0.040   PREDICTED: hypothetical protein 
IRS2                  0.040   insulin receptor substrate 2 
FOXD4L1               0.040   forkhead box D4-like 1 
DMRTB1                0.033   DMRT-like family B with proline-rich C-terminal, 1 [...
LOC100293875          0.033   PREDICTED: hypothetical protein 
LOC100289803          0.033   PREDICTED: hypothetical protein XP_002348112 
LOC100288508          0.033   PREDICTED: hypothetical protein XP_002343798 
SHROOM1               0.033   shroom family member 1 
LOC100293404          0.027   PREDICTED: hypothetical protein 
LOC100287920          0.027   PREDICTED: hypothetical protein XP_002344198 
BHLHA15               0.027   basic helix-loop-helix family, member a15 
LOC100291661          0.020   PREDICTED: hypothetical protein XP_002345523 
LOC100288447          0.020   PREDICTED: hypothetical protein 
LOC100288447          0.020   PREDICTED: hypothetical protein XP_002343814 
LOC100287771          0.020   PREDICTED: hypothetical protein 
LOC100291131          0.020   PREDICTED: hypothetical protein XP_002346641 
LOC100287771          0.020   PREDICTED: hypothetical protein XP_002343133 
FAM83H                0.020   FAM83H 
LOC100293766          0.020   PREDICTED: hypothetical protein 
LOC100290093          0.020   PREDICTED: hypothetical protein XP_002346542 
LOC100287789          0.020   PREDICTED: hypothetical protein XP_002342381 
SAFB2                 0.020   scaffold attachment factor B2 
CYB561D2              0.020   cytochrome b-561 domain containing 2 
LOC100292124          0.013   PREDICTED: hypothetical protein XP_002346387 
LOC100293892          0.013   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press