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Search of human proteins with 133925803
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|133925803 RNA binding motif protein 9 isoform 5 [Homo
sapiens]
(451 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|133925803 RNA binding motif protein 9 isoform 5 [Homo sapiens] 920 0.0
gi|133925805 RNA binding motif protein 9 isoform 6 [Homo sapiens] 913 0.0
gi|72534682 RNA binding motif protein 9 isoform 1 [Homo sapiens] 753 0.0
gi|133925799 RNA binding motif protein 9 isoform 3 [Homo sapiens] 739 0.0
gi|133925801 RNA binding motif protein 9 isoform 4 [Homo sapiens] 591 e-169
gi|7657504 RNA binding motif protein 9 isoform 2 [Homo sapiens] 584 e-167
gi|215272412 ataxin 2-binding protein 1 isoform 4 [Homo sapiens] 468 e-132
gi|22538403 ataxin 2-binding protein 1 isoform 4 [Homo sapiens] 468 e-132
gi|22538407 ataxin 2-binding protein 1 isoform 2 [Homo sapiens] 464 e-131
gi|215272410 ataxin 2-binding protein 1 isoform 5 [Homo sapiens] 460 e-129
gi|22538405 ataxin 2-binding protein 1 isoform 1 [Homo sapiens] 450 e-126
gi|22538409 ataxin 2-binding protein 1 isoform 3 [Homo sapiens] 399 e-111
gi|128485756 hexaribonucleotide binding protein 3 [Homo sapiens] 392 e-109
gi|189181654 deleted in azoospermia [Homo sapiens] 61 2e-09
gi|54292113 deleted in azoospermia 4 isoform 1 [Homo sapiens] 61 2e-09
gi|221139802 RNA binding motif protein 24 isoform 1 [Homo sapiens] 61 2e-09
gi|62244004 modulator of estrogen induced transcription isoform ... 61 2e-09
gi|63176611 modulator of estrogen induced transcription isoform ... 61 2e-09
gi|4757926 RNA binding motif protein 39 isoform b [Homo sapiens] 60 5e-09
gi|35493811 RNA binding motif protein 39 isoform a [Homo sapiens] 60 5e-09
gi|37574731 boule isoform 1 [Homo sapiens] 60 5e-09
gi|45238849 poly(A) binding protein, cytoplasmic 3 [Homo sapiens] 59 7e-09
gi|208431836 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... 59 9e-09
gi|4504715 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... 59 9e-09
gi|208431833 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... 59 9e-09
gi|46367787 poly(A) binding protein, cytoplasmic 1 [Homo sapiens] 59 1e-08
gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens] 58 2e-08
gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens] 58 2e-08
gi|14719414 boule isoform 2 [Homo sapiens] 58 2e-08
gi|4759098 splicing factor, arginine/serine-rich 10 [Homo sapiens] 58 2e-08
>gi|133925803 RNA binding motif protein 9 isoform 5 [Homo sapiens]
Length = 451
Score = 920 bits (2377), Expect = 0.0
Identities = 451/451 (100%), Positives = 451/451 (100%)
Query: 1 MAEGAQPQQPPQLGPGAAARGMKRESELELPVPGAGGDGADPGLSKRPRTEEAAADGGGG 60
MAEGAQPQQPPQLGPGAAARGMKRESELELPVPGAGGDGADPGLSKRPRTEEAAADGGGG
Sbjct: 1 MAEGAQPQQPPQLGPGAAARGMKRESELELPVPGAGGDGADPGLSKRPRTEEAAADGGGG 60
Query: 61 MQNEPLTPGYHGFPARDSQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDY 120
MQNEPLTPGYHGFPARDSQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDY
Sbjct: 61 MQNEPLTPGYHGFPARDSQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDY 120
Query: 121 AGQTGEHNLTLYGSTQAHGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKST 180
AGQTGEHNLTLYGSTQAHGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKST
Sbjct: 121 AGQTGEHNLTLYGSTQAHGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKST 180
Query: 181 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 240
PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK
Sbjct: 181 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 240
Query: 241 LHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSL 300
LHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSL
Sbjct: 241 LHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSL 300
Query: 301 GNDAAVPLSGRGGINTYIPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAV 360
GNDAAVPLSGRGGINTYIPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAV
Sbjct: 301 GNDAAVPLSGRGGINTYIPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAV 360
Query: 361 PPTAIPAYPGVVYQDGFYGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTA 420
PPTAIPAYPGVVYQDGFYGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTA
Sbjct: 361 PPTAIPAYPGVVYQDGFYGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTA 420
Query: 421 DPYHALAPAASYGVGAVASLYRGGYSRFAPY 451
DPYHALAPAASYGVGAVASLYRGGYSRFAPY
Sbjct: 421 DPYHALAPAASYGVGAVASLYRGGYSRFAPY 451
>gi|133925805 RNA binding motif protein 9 isoform 6 [Homo sapiens]
Length = 450
Score = 913 bits (2360), Expect = 0.0
Identities = 450/451 (99%), Positives = 450/451 (99%), Gaps = 1/451 (0%)
Query: 1 MAEGAQPQQPPQLGPGAAARGMKRESELELPVPGAGGDGADPGLSKRPRTEEAAADGGGG 60
MAEGAQPQQPPQLGPGAAARGMKRESELELPVPGAGGDGADPGLSKRPRTEEAAADGGGG
Sbjct: 1 MAEGAQPQQPPQLGPGAAARGMKRESELELPVPGAGGDGADPGLSKRPRTEEAAADGGGG 60
Query: 61 MQNEPLTPGYHGFPARDSQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDY 120
MQNEPLTPGYHGFPARDSQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDY
Sbjct: 61 MQNEPLTPGYHGFPARDSQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDY 120
Query: 121 AGQTGEHNLTLYGSTQAHGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKST 180
AGQTGEHNLTLYGSTQAHGEQSSNSPSTQNGSLT TEGGAQTDGQQSQTQSSENSESKST
Sbjct: 121 AGQTGEHNLTLYGSTQAHGEQSSNSPSTQNGSLT-TEGGAQTDGQQSQTQSSENSESKST 179
Query: 181 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 240
PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK
Sbjct: 180 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 239
Query: 241 LHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSL 300
LHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSL
Sbjct: 240 LHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSL 299
Query: 301 GNDAAVPLSGRGGINTYIPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAV 360
GNDAAVPLSGRGGINTYIPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAV
Sbjct: 300 GNDAAVPLSGRGGINTYIPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAV 359
Query: 361 PPTAIPAYPGVVYQDGFYGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTA 420
PPTAIPAYPGVVYQDGFYGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTA
Sbjct: 360 PPTAIPAYPGVVYQDGFYGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTA 419
Query: 421 DPYHALAPAASYGVGAVASLYRGGYSRFAPY 451
DPYHALAPAASYGVGAVASLYRGGYSRFAPY
Sbjct: 420 DPYHALAPAASYGVGAVASLYRGGYSRFAPY 450
>gi|72534682 RNA binding motif protein 9 isoform 1 [Homo sapiens]
Length = 380
Score = 753 bits (1943), Expect = 0.0
Identities = 372/374 (99%), Positives = 373/374 (99%), Gaps = 1/374 (0%)
Query: 78 SQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA 137
+QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA
Sbjct: 8 TQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA 67
Query: 138 HGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD 197
HGEQSSNSPSTQNGSLT TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD
Sbjct: 68 HGEQSSNSPSTQNGSLT-TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD 126
Query: 198 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 257
LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT
Sbjct: 127 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 186
Query: 258 ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY 317
ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY
Sbjct: 187 ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY 246
Query: 318 IPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQDGF 377
IPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQDGF
Sbjct: 247 IPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQDGF 306
Query: 378 YGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPYHALAPAASYGVGAV 437
YGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPYHALAPAASYGVGAV
Sbjct: 307 YGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPYHALAPAASYGVGAV 366
Query: 438 ASLYRGGYSRFAPY 451
ASLYRGGYSRFAPY
Sbjct: 367 ASLYRGGYSRFAPY 380
>gi|133925799 RNA binding motif protein 9 isoform 3 [Homo sapiens]
Length = 376
Score = 739 bits (1908), Expect = 0.0
Identities = 367/374 (98%), Positives = 369/374 (98%), Gaps = 5/374 (1%)
Query: 78 SQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA 137
+QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA
Sbjct: 8 TQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA 67
Query: 138 HGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD 197
HGEQSSNSPSTQNGSLT TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD
Sbjct: 68 HGEQSSNSPSTQNGSLT-TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD 126
Query: 198 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 257
LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT
Sbjct: 127 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 186
Query: 258 ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY 317
ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY
Sbjct: 187 ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY 246
Query: 318 IPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQDGF 377
IPLI +PGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQDGF
Sbjct: 247 IPLI----IPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQDGF 302
Query: 378 YGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPYHALAPAASYGVGAV 437
YGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPYHALAPAASYGVGAV
Sbjct: 303 YGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPYHALAPAASYGVGAV 362
Query: 438 ASLYRGGYSRFAPY 451
ASLYRGGYSRFAPY
Sbjct: 363 ASLYRGGYSRFAPY 376
>gi|133925801 RNA binding motif protein 9 isoform 4 [Homo sapiens]
Length = 370
Score = 591 bits (1524), Expect = e-169
Identities = 293/297 (98%), Positives = 294/297 (98%), Gaps = 1/297 (0%)
Query: 78 SQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA 137
+QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA
Sbjct: 8 TQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA 67
Query: 138 HGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD 197
HGEQSSNSPSTQNGSLT TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD
Sbjct: 68 HGEQSSNSPSTQNGSLT-TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD 126
Query: 198 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 257
LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT
Sbjct: 127 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 186
Query: 258 ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY 317
ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY
Sbjct: 187 ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY 246
Query: 318 IPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQ 374
IPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGV Q
Sbjct: 247 IPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVDMQ 303
>gi|7657504 RNA binding motif protein 9 isoform 2 [Homo sapiens]
Length = 367
Score = 584 bits (1506), Expect = e-167
Identities = 289/297 (97%), Positives = 291/297 (97%), Gaps = 4/297 (1%)
Query: 78 SQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA 137
+QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA
Sbjct: 8 TQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA 67
Query: 138 HGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD 197
HGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD
Sbjct: 68 HGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD 127
Query: 198 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 257
LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT
Sbjct: 128 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 187
Query: 258 ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY 317
ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY
Sbjct: 188 ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY 247
Query: 318 IPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQ 374
IPLI +PGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGV Q
Sbjct: 248 IPLI----IPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVDMQ 300
>gi|215272412 ataxin 2-binding protein 1 isoform 4 [Homo sapiens]
Length = 397
Score = 468 bits (1203), Expect = e-132
Identities = 261/410 (63%), Positives = 283/410 (69%), Gaps = 58/410 (14%)
Query: 79 QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ---DYAGQTG--EHNLTLYG 133
+GNQE PD M QP+ + F PP QNGIP EY PH +Y GQT EH L LY
Sbjct: 9 RGNQEAAAAPDTMAQPYASAQFAPP-QNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYP 67
Query: 134 STQAHGEQS--SNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 191
Q H EQS S T +G+ TQT+ A TDGQ QTQ SEN+E+KS PKRLHVSNIPF
Sbjct: 68 PAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQP-QTQPSENTENKSQPKRLHVSNIPF 126
Query: 192 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 251
RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 127 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 186
Query: 252 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSF--QADVSLGNDAAVPLS 309
EVNNATARVMTNKK V PY NGWKL+PVVGAVY PE YA + QA+ + + P S
Sbjct: 187 EVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSS 246
Query: 310 GRGGINTYIPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVR-AVPPTAIPAY 368
L+ +PGFPYP AAT AAA+RGAHLRGRGRTVY R A PP IPAY
Sbjct: 247 ----------LVYTSAMPGFPYP-AATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAY 295
Query: 369 PGVVYQDGFYGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPY-HALA 427
GVVYQDGFYGAD+YGGYAAYRYAQP AT AAAYSD YGRVY ADPY HALA
Sbjct: 296 GGVVYQDGFYGADIYGGYAAYRYAQPTPAT--------AAAYSDSYGRVYAADPYHHALA 347
Query: 428 PAASYGVGAV--------------------------ASLYRGGYSRFAPY 451
PA +YGVGA+ AS+YRGGY+RFAPY
Sbjct: 348 PAPTYGVGAMNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYNRFAPY 397
>gi|22538403 ataxin 2-binding protein 1 isoform 4 [Homo sapiens]
Length = 397
Score = 468 bits (1203), Expect = e-132
Identities = 261/410 (63%), Positives = 283/410 (69%), Gaps = 58/410 (14%)
Query: 79 QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ---DYAGQTG--EHNLTLYG 133
+GNQE PD M QP+ + F PP QNGIP EY PH +Y GQT EH L LY
Sbjct: 9 RGNQEAAAAPDTMAQPYASAQFAPP-QNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYP 67
Query: 134 STQAHGEQS--SNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 191
Q H EQS S T +G+ TQT+ A TDGQ QTQ SEN+E+KS PKRLHVSNIPF
Sbjct: 68 PAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQP-QTQPSENTENKSQPKRLHVSNIPF 126
Query: 192 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 251
RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 127 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 186
Query: 252 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSF--QADVSLGNDAAVPLS 309
EVNNATARVMTNKK V PY NGWKL+PVVGAVY PE YA + QA+ + + P S
Sbjct: 187 EVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSS 246
Query: 310 GRGGINTYIPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVR-AVPPTAIPAY 368
L+ +PGFPYP AAT AAA+RGAHLRGRGRTVY R A PP IPAY
Sbjct: 247 ----------LVYTSAMPGFPYP-AATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAY 295
Query: 369 PGVVYQDGFYGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPY-HALA 427
GVVYQDGFYGAD+YGGYAAYRYAQP AT AAAYSD YGRVY ADPY HALA
Sbjct: 296 GGVVYQDGFYGADIYGGYAAYRYAQPTPAT--------AAAYSDSYGRVYAADPYHHALA 347
Query: 428 PAASYGVGAV--------------------------ASLYRGGYSRFAPY 451
PA +YGVGA+ AS+YRGGY+RFAPY
Sbjct: 348 PAPTYGVGAMNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYNRFAPY 397
>gi|22538407 ataxin 2-binding protein 1 isoform 2 [Homo sapiens]
Length = 392
Score = 464 bits (1194), Expect = e-131
Identities = 257/385 (66%), Positives = 278/385 (72%), Gaps = 33/385 (8%)
Query: 79 QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ---DYAGQTG--EHNLTLYG 133
QGNQE PD M QP+ + F PP QNGIP EY PH +Y GQT EH L LY
Sbjct: 29 QGNQEAAAAPDTMAQPYASAQFAPP-QNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYP 87
Query: 134 STQAHGEQS--SNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 191
Q H EQS S T +G+ TQT+ A TDGQ QTQ SEN+E+KS PKRLHVSNIPF
Sbjct: 88 PAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQP-QTQPSENTENKSQPKRLHVSNIPF 146
Query: 192 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 251
RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 147 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 206
Query: 252 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSF--QADVSLGNDAAVPLS 309
EVNNATARVMTNKK V PY NGWKL+PVVGAVY PE YA + QA+ + + P S
Sbjct: 207 EVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSS 266
Query: 310 GRGGINTYIPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVR-AVPPTAIPAY 368
L+ +PGFPYP AAT AAA+RGAHLRGRGRTVY R A PP IPAY
Sbjct: 267 ----------LVYTSAMPGFPYP-AATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAY 315
Query: 369 PGVVYQDGFYGAD-LYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPY-HAL 426
GVVYQ+ YG L GGYAAYRYAQP AT AAAYSD YGRVY ADPY HAL
Sbjct: 316 GGVVYQEPVYGNKLLQGGYAAYRYAQPTPAT--------AAAYSDSYGRVYAADPYHHAL 367
Query: 427 APAASYGVGAVASLYRGGYSRFAPY 451
APA +YGVGA+AS+YRGGY+RFAPY
Sbjct: 368 APAPTYGVGAMASIYRGGYNRFAPY 392
>gi|215272410 ataxin 2-binding protein 1 isoform 5 [Homo sapiens]
Length = 370
Score = 460 bits (1183), Expect = e-129
Identities = 257/408 (62%), Positives = 273/408 (66%), Gaps = 81/408 (19%)
Query: 79 QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ---DYAGQTG--EHNLTLYG 133
+GNQE PD M QP+ + F PP QNGIP EY PH +Y GQT EH L LY
Sbjct: 9 RGNQEAAAAPDTMAQPYASAQFAPP-QNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYP 67
Query: 134 STQAHGEQS--SNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 191
Q H EQS S T +G+ TQT+ A TDGQ QTQ SEN+E+KS PKRLHVSNIPF
Sbjct: 68 PAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQP-QTQPSENTENKSQPKRLHVSNIPF 126
Query: 192 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 251
RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 127 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 186
Query: 252 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGR 311
EVNNATARVMTNKK V PY NGWKL+PVVGAVY PE YA
Sbjct: 187 EVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYA--------------------- 225
Query: 312 GGINTYIPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVR-AVPPTAIPAYPG 370
VPGFPYP AAT AAA+RGAHLRGRGRTVY R A PP IPAY G
Sbjct: 226 --------------VPGFPYP-AATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGG 270
Query: 371 VVYQDGFYGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPY-HALAPA 429
VVYQDGFYGAD+YGGYAAYRYAQP AT AAAYSD YGRVY ADPY HALAPA
Sbjct: 271 VVYQDGFYGADIYGGYAAYRYAQPTPAT--------AAAYSDSYGRVYAADPYHHALAPA 322
Query: 430 ASYGVGAV--------------------------ASLYRGGYSRFAPY 451
+YGVGA+ AS+YRGGY+RFAPY
Sbjct: 323 PTYGVGAMNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYNRFAPY 370
>gi|22538405 ataxin 2-binding protein 1 isoform 1 [Homo sapiens]
Length = 418
Score = 450 bits (1157), Expect = e-126
Identities = 257/411 (62%), Positives = 278/411 (67%), Gaps = 59/411 (14%)
Query: 79 QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ---DYAGQTG--EHNLTLYG 133
QGNQE PD M QP+ + F PP QNGIP EY PH +Y GQT EH L LY
Sbjct: 29 QGNQEAAAAPDTMAQPYASAQFAPP-QNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYP 87
Query: 134 STQAHGEQS--SNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 191
Q H EQS S T +G+ TQT+ A TDGQ QTQ SEN+E+KS PKRLHVSNIPF
Sbjct: 88 PAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQP-QTQPSENTENKSQPKRLHVSNIPF 146
Query: 192 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 251
RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 147 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 206
Query: 252 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSF--QADVSLGNDAAVPLS 309
EVNNATARVMTNKK V PY NGWKL+PVVGAVY PE YA + QA+ + + P S
Sbjct: 207 EVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSS 266
Query: 310 GRGGINTYIPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVR-AVPPTAIPAY 368
L+ +PGFPYP AAT AAA+RGAHLRGRGRTVY R A PP IPAY
Sbjct: 267 ----------LVYTSAMPGFPYP-AATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAY 315
Query: 369 PGVVYQDGFYGAD-LYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPY-HAL 426
GVVYQ+ YG L GGYAAYRYAQP AT AAAYSD YGRVY ADPY HAL
Sbjct: 316 GGVVYQEPVYGNKLLQGGYAAYRYAQPTPAT--------AAAYSDSYGRVYAADPYHHAL 367
Query: 427 APAASYGVGAV--------------------------ASLYRGGYSRFAPY 451
APA +YGVGA+ AS+YRGGY+RFAPY
Sbjct: 368 APAPTYGVGAMNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYNRFAPY 418
>gi|22538409 ataxin 2-binding protein 1 isoform 3 [Homo sapiens]
Length = 395
Score = 399 bits (1025), Expect = e-111
Identities = 227/353 (64%), Positives = 245/353 (69%), Gaps = 32/353 (9%)
Query: 79 QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ---DYAGQTG--EHNLTLYG 133
QGNQE PD M QP+ + F PP QNGIP EY PH +Y GQT EH L LY
Sbjct: 29 QGNQEAAAAPDTMAQPYASAQFAPP-QNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYP 87
Query: 134 STQAHGEQS--SNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 191
Q H EQS S T +G+ TQT+ A TDGQ QTQ SEN+E+KS PKRLHVSNIPF
Sbjct: 88 PAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQP-QTQPSENTENKSQPKRLHVSNIPF 146
Query: 192 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 251
RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 147 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 206
Query: 252 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSF--QADVSLGNDAAVPLS 309
EVNNATARVMTNKK V PY NGWKL+PVVGAVY PE YA + QA+ + + P S
Sbjct: 207 EVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSS 266
Query: 310 GRGGINTYIPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVR-AVPPTAIPAY 368
L+ +PGFPYP AAT AAA+RGAHLRGRGRTVY R A PP IPAY
Sbjct: 267 ----------LVYTSAMPGFPYP-AATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAY 315
Query: 369 PGVVYQDGFYGAD-LYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTA 420
GVVYQ+ YG L GGYAAYRYAQP AT AAAYSD V+ A
Sbjct: 316 GGVVYQEPVYGNKLLQGGYAAYRYAQPTPAT--------AAAYSDRNQFVFVA 360
>gi|128485756 hexaribonucleotide binding protein 3 [Homo sapiens]
Length = 312
Score = 392 bits (1008), Expect = e-109
Identities = 218/360 (60%), Positives = 238/360 (66%), Gaps = 61/360 (16%)
Query: 91 MVQPFTTIPFPPPPQNGIPTEYGVPH---TQDYAGQTG---EHNLTLYGSTQAHGEQSSN 144
M QP+ +PPPPQNGIP EY P TQDY+GQT EH +TLY Q H EQ +
Sbjct: 1 MAQPYPPAQYPPPPQNGIPAEYAPPPPHPTQDYSGQTPVPTEHGMTLYTPAQTHPEQPGS 60
Query: 145 SPSTQ----NGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQ 200
STQ ++ QT+ AQTD SQ + K PKRLHVSNIPFRFRDPDLRQ
Sbjct: 61 EASTQPIAGTQTVPQTDEAAQTD---SQPLHPSDPTEKQQPKRLHVSNIPFRFRDPDLRQ 117
Query: 201 MFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARV 260
MFGQFGKILDVEIIFNERGSKGFGFVTFE S+DADRAREKL+GT+VEGRKIEVNNATARV
Sbjct: 118 MFGQFGKILDVEIIFNERGSKGFGFVTFETSSDADRAREKLNGTIVEGRKIEVNNATARV 177
Query: 261 MTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTYIPL 320
MTNKK PY NGWKL+PVVGAVYGPE YA
Sbjct: 178 MTNKKTGNPYTNGWKLNPVVGAVYGPEFYA------------------------------ 207
Query: 321 ISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAV-PPTAIPAYPGVVYQDGFYG 379
V GFPYPT TA A+RGAHLRGRGR VY RA PP IP Y VVYQDGFYG
Sbjct: 208 -----VTGFPYPTTG-TAVAYRGAHLRGRGRAVYNTFRAAPPPPPIPTYGAVVYQDGFYG 261
Query: 380 ADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVY-TADPY-HALAPAASYGVGAV 437
A++YGGYAAYRYAQP AAAAAAYSD YGRVY ADPY H + PAA+Y +G +
Sbjct: 262 AEIYGGYAAYRYAQP---------AAAAAAYSDSYGRVYAAADPYHHTIGPAATYSIGTM 312
>gi|189181654 deleted in azoospermia [Homo sapiens]
Length = 744
Score = 60.8 bits (146), Expect = 2e-09
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 22/184 (11%)
Query: 92 VQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNG 151
VQP + PPPP + P+T+ Y + +T TQ QS+ +P T N
Sbjct: 124 VQPRPLVVNPPPPPQ-FQNVWRNPNTETYL----QPQITPNPVTQH--VQSAANPETPNS 176
Query: 152 SLTQTEGGAQTDGQQSQTQSSEN---SESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKI 208
++++ + Q S +S+ E K P + V I R + ++ FG++G +
Sbjct: 177 TISR-----EASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSV 231
Query: 209 LDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATARVMTNKK 265
+V+II N G SKG+GFV+F N D +K+ G+ + G+K+++ A + +
Sbjct: 232 KEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRKQKLCAR 287
Query: 266 MVTP 269
V P
Sbjct: 288 HVQP 291
Score = 60.8 bits (146), Expect = 2e-09
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 22/184 (11%)
Query: 92 VQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNG 151
VQP + PPPP + P+T+ Y + +T TQ QS+ +P T N
Sbjct: 289 VQPRPLVVNPPPPPQ-FQNVWRNPNTETYL----QPQITPNPVTQH--VQSAANPETPNS 341
Query: 152 SLTQTEGGAQTDGQQSQTQSSEN---SESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKI 208
++++ + Q S +S+ E K P + V I R + ++ FG++G +
Sbjct: 342 TISR-----EASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSV 396
Query: 209 LDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATARVMTNKK 265
+V+II N G SKG+GFV+F N D +K+ G+ + G+K+++ A + +
Sbjct: 397 KEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRKQKLCAR 452
Query: 266 MVTP 269
V P
Sbjct: 453 HVQP 456
Score = 53.5 bits (127), Expect = 4e-07
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 15/134 (11%)
Query: 142 SSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSEN---SESKSTPKRLHVSNIPFRFRDPDL 198
S+ +P T N ++++ + Q S +S+ E K P + V I R + ++
Sbjct: 2 SAANPETPNSTISR-----EASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEI 56
Query: 199 RQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNN 255
FG++G + +V+II N G SKG+GFV+F N D +K+ G+ + G+K+++
Sbjct: 57 GSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGP 112
Query: 256 ATARVMTNKKMVTP 269
A + + V P
Sbjct: 113 AIRKQKLCARHVQP 126
>gi|54292113 deleted in azoospermia 4 isoform 1 [Homo sapiens]
Length = 579
Score = 60.8 bits (146), Expect = 2e-09
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 22/184 (11%)
Query: 92 VQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNG 151
VQP + PPPP + P+T+ Y + +T TQ QS+ +P T N
Sbjct: 124 VQPRPLVVNPPPPPQ-FQNVWRNPNTETYL----QPQITPNPVTQH--VQSAANPETPNS 176
Query: 152 SLTQTEGGAQTDGQQSQTQSSEN---SESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKI 208
++++ + Q S +S+ E K P + V I R + ++ FG++G +
Sbjct: 177 TISR-----EASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSV 231
Query: 209 LDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATARVMTNKK 265
+V+II N G SKG+GFV+F N D +K+ G+ + G+K+++ A + +
Sbjct: 232 KEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRKQKLCAR 287
Query: 266 MVTP 269
V P
Sbjct: 288 HVQP 291
Score = 53.5 bits (127), Expect = 4e-07
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 15/134 (11%)
Query: 142 SSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSEN---SESKSTPKRLHVSNIPFRFRDPDL 198
S+ +P T N ++++ + Q S +S+ E K P + V I R + ++
Sbjct: 2 SAANPETPNSTISR-----EASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEI 56
Query: 199 RQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNN 255
FG++G + +V+II N G SKG+GFV+F N D +K+ G+ + G+K+++
Sbjct: 57 GSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGP 112
Query: 256 ATARVMTNKKMVTP 269
A + + V P
Sbjct: 113 AIRKQKLCARHVQP 126
>gi|221139802 RNA binding motif protein 24 isoform 1 [Homo sapiens]
Length = 236
Score = 60.8 bits (146), Expect = 2e-09
Identities = 65/242 (26%), Positives = 101/242 (41%), Gaps = 29/242 (11%)
Query: 175 SESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSA 232
++ +T ++ V +P+ D LR+ F FG+I + +I + + S+G+GFVT + A
Sbjct: 4 TQKDTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRA 63
Query: 233 DADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAAS 292
A+RA K +++GRK VN A + +++ P G +G + +
Sbjct: 64 AAERAC-KDPNPIIDGRKANVN--LAYLGAKPRIMQP-----------GFAFGVQQLHPA 109
Query: 293 SFQADVSLGNDAAVPLSG-RGGINTYIPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGR 351
Q + P + + G+ IP + P T AA+
Sbjct: 110 LIQRPFGIPAHYVYPQAFVQPGV--VIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAA 167
Query: 352 TVYGAVRAVPPTAIPAYPGVVYQDGFYGADLYGGYAAYR---YAQPATATAATAAAAAAA 408
A P A PA G V G+ GYA + A P TA AA AAAAAAA
Sbjct: 168 AAAAAYDQYPYAASPAAAGYVTAGGY-------GYAVQQPITAAAPGTAAAAAAAAAAAA 220
Query: 409 AY 410
A+
Sbjct: 221 AF 222
Score = 29.3 bits (64), Expect = 7.6
Identities = 23/47 (48%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
Query: 386 YAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPYHALAPAASY 432
Y Y A A +AA AAAAAAAAY D Y PY A AA Y
Sbjct: 149 YIDYTGAAYAQYSAAAAAAAAAAAY-DQY-------PYAASPAAAGY 187
>gi|62244004 modulator of estrogen induced transcription isoform b
[Homo sapiens]
Length = 1016
Score = 60.8 bits (146), Expect = 2e-09
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Query: 134 STQAHGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRF 193
ST A G+ S+S +++ + + T SS + S S+ K + VS +
Sbjct: 326 STGASGQAKSSSKESKDSKTSSKDDKGST--------SSTSGSSGSSTKNIWVSGLSSNT 377
Query: 194 RDPDLRQMFGQFGKILDVEIIFNER--GSKGFGFVTFENSADADRAREKLHGTVVEGRKI 251
+ DL+ +FG++GK+L +++ N R G+K +G VT +S + R LH T + G+ I
Sbjct: 378 KAADLKNLFGKYGKVLSAKVVTNARSPGAKCYGIVTMSSSTEVSRCIAHLHRTELHGQLI 437
Query: 252 EV 253
V
Sbjct: 438 SV 439
>gi|63176611 modulator of estrogen induced transcription isoform a
[Homo sapiens]
Length = 1034
Score = 60.8 bits (146), Expect = 2e-09
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Query: 134 STQAHGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRF 193
ST A G+ S+S +++ + + T SS + S S+ K + VS +
Sbjct: 344 STGASGQAKSSSKESKDSKTSSKDDKGST--------SSTSGSSGSSTKNIWVSGLSSNT 395
Query: 194 RDPDLRQMFGQFGKILDVEIIFNER--GSKGFGFVTFENSADADRAREKLHGTVVEGRKI 251
+ DL+ +FG++GK+L +++ N R G+K +G VT +S + R LH T + G+ I
Sbjct: 396 KAADLKNLFGKYGKVLSAKVVTNARSPGAKCYGIVTMSSSTEVSRCIAHLHRTELHGQLI 455
Query: 252 EV 253
V
Sbjct: 456 SV 457
>gi|4757926 RNA binding motif protein 39 isoform b [Homo sapiens]
Length = 524
Score = 59.7 bits (143), Expect = 5e-09
Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 160 AQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN-ER 218
+Q + ++ ++ + + P RL+V ++ F + LR +F FG+I ++++ + E
Sbjct: 228 SQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSET 287
Query: 219 G-SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATAR 259
G SKG+GF+TF +S A +A E+L+G + GR ++V + T R
Sbjct: 288 GRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTER 329
>gi|35493811 RNA binding motif protein 39 isoform a [Homo sapiens]
Length = 530
Score = 59.7 bits (143), Expect = 5e-09
Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 160 AQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN-ER 218
+Q + ++ ++ + + P RL+V ++ F + LR +F FG+I ++++ + E
Sbjct: 228 SQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSET 287
Query: 219 G-SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATAR 259
G SKG+GF+TF +S A +A E+L+G + GR ++V + T R
Sbjct: 288 GRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTER 329
>gi|37574731 boule isoform 1 [Homo sapiens]
Length = 295
Score = 59.7 bits (143), Expect = 5e-09
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 19/149 (12%)
Query: 155 QTEGGAQTDGQQSQTQSSENSESKST----------------PKRLHVSNIPFRFRDPDL 198
+TE G QT Q S + S P R+ V I F+ + DL
Sbjct: 2 ETESGPQTSNQMQTDSLSPSPNPVSPVPLNNPTSAPRYGTVIPNRIFVGGIDFKTNESDL 61
Query: 199 RQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 257
R+ F Q+G + +V+I+ + G SKG+GFVTFE DA + ++ + +K+ + A
Sbjct: 62 RKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKLNIGPAI 121
Query: 258 AR--VMTNKKMVTPYANGWKLSPVVGAVY 284
+ V + + P A L+ G Y
Sbjct: 122 RKQQVGIPRSSIMPAAGTMYLTTSTGYPY 150
>gi|45238849 poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
Length = 631
Score = 59.3 bits (142), Expect = 7e-09
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 166 QSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFG 224
+ + ++ + +K P +++ N D L+ +FG+FG L V+++ +E G SKGFG
Sbjct: 176 RKEREAELGARAKEFPN-VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFG 234
Query: 225 FVTFENSADADRAREKLHGTVVEGRKIEVNNATARV 260
FV+FE DA +A ++++G + G++I V A +V
Sbjct: 235 FVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Score = 55.8 bits (133), Expect = 8e-08
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 178 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRA 237
KS + V N+ + L FG IL ++ +E GSKG+GFV FE A+RA
Sbjct: 95 KSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERA 154
Query: 238 REKLHGTVVEGRKIEVNNATAR 259
+K++G ++ GRK+ V +R
Sbjct: 155 IKKMNGMLLNGRKVFVGQFKSR 176
Score = 47.8 bits (112), Expect = 2e-05
Identities = 26/93 (27%), Positives = 49/93 (52%)
Query: 161 QTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS 220
QT+ +++ Q ++ ++ L+V N+ D LR+ F FG I +++ S
Sbjct: 273 QTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRS 332
Query: 221 KGFGFVTFENSADADRAREKLHGTVVEGRKIEV 253
KGFGFV F + +A +A +++G +V + + V
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
>gi|208431836 poly A binding protein, cytoplasmic 4 isoform 3 [Homo
sapiens]
Length = 631
Score = 58.9 bits (141), Expect = 9e-09
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 184 LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLH 242
+++ N D L+++F QFGK L V+++ + G SKGFGFV++E DA++A E+++
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMN 252
Query: 243 GTVVEGRKIEVNNATARV 260
G + G+ I V A +V
Sbjct: 253 GKEISGKIIFVGRAQKKV 270
Score = 54.7 bits (130), Expect = 2e-07
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 178 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRA 237
KS + + N+ + L F FG IL +++ +E GSKG+ FV FE AD+A
Sbjct: 95 KSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKA 154
Query: 238 REKLHGTVVEGRKIEVNNATAR 259
EK++G ++ RK+ V +R
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSR 176
Score = 48.1 bits (113), Expect = 2e-05
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 161 QTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS 220
Q + ++ Q + S+ L++ N+ D LR+ F FG I +++ + S
Sbjct: 273 QAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 221 KGFGFVTFENSADADRAREKLHGTVVEGRKIEV 253
KGFGFV F + +A +A +++G +V + + V
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYV 365
Score = 37.4 bits (85), Expect = 0.028
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 174 NSESKSTPKR-LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN--ERGSKGFGFVTFEN 230
N+ + S P L+V ++ + L + F G +L + + + R S G+ +V F+
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 231 SADADRAREKLHGTVVEGRKIEV 253
ADA+RA + ++ V++G+ I +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRI 84
>gi|4504715 poly A binding protein, cytoplasmic 4 isoform 2 [Homo
sapiens]
Length = 644
Score = 58.9 bits (141), Expect = 9e-09
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 184 LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLH 242
+++ N D L+++F QFGK L V+++ + G SKGFGFV++E DA++A E+++
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMN 252
Query: 243 GTVVEGRKIEVNNATARV 260
G + G+ I V A +V
Sbjct: 253 GKEISGKIIFVGRAQKKV 270
Score = 54.7 bits (130), Expect = 2e-07
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 178 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRA 237
KS + + N+ + L F FG IL +++ +E GSKG+ FV FE AD+A
Sbjct: 95 KSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKA 154
Query: 238 REKLHGTVVEGRKIEVNNATAR 259
EK++G ++ RK+ V +R
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSR 176
Score = 48.1 bits (113), Expect = 2e-05
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 161 QTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS 220
Q + ++ Q + S+ L++ N+ D LR+ F FG I +++ + S
Sbjct: 273 QAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 221 KGFGFVTFENSADADRAREKLHGTVVEGRKIEV 253
KGFGFV F + +A +A +++G +V + + V
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYV 365
Score = 37.4 bits (85), Expect = 0.028
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 174 NSESKSTPKR-LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN--ERGSKGFGFVTFEN 230
N+ + S P L+V ++ + L + F G +L + + + R S G+ +V F+
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 231 SADADRAREKLHGTVVEGRKIEV 253
ADA+RA + ++ V++G+ I +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRI 84
>gi|208431833 poly A binding protein, cytoplasmic 4 isoform 1 [Homo
sapiens]
Length = 660
Score = 58.9 bits (141), Expect = 9e-09
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 184 LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLH 242
+++ N D L+++F QFGK L V+++ + G SKGFGFV++E DA++A E+++
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMN 252
Query: 243 GTVVEGRKIEVNNATARV 260
G + G+ I V A +V
Sbjct: 253 GKEISGKIIFVGRAQKKV 270
Score = 54.7 bits (130), Expect = 2e-07
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 178 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRA 237
KS + + N+ + L F FG IL +++ +E GSKG+ FV FE AD+A
Sbjct: 95 KSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKA 154
Query: 238 REKLHGTVVEGRKIEVNNATAR 259
EK++G ++ RK+ V +R
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSR 176
Score = 48.1 bits (113), Expect = 2e-05
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 161 QTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS 220
Q + ++ Q + S+ L++ N+ D LR+ F FG I +++ + S
Sbjct: 273 QAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 221 KGFGFVTFENSADADRAREKLHGTVVEGRKIEV 253
KGFGFV F + +A +A +++G +V + + V
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYV 365
Score = 37.4 bits (85), Expect = 0.028
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 174 NSESKSTPKR-LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN--ERGSKGFGFVTFEN 230
N+ + S P L+V ++ + L + F G +L + + + R S G+ +V F+
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 231 SADADRAREKLHGTVVEGRKIEV 253
ADA+RA + ++ V++G+ I +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRI 84
>gi|46367787 poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
Length = 636
Score = 58.5 bits (140), Expect = 1e-08
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 184 LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLH 242
+++ N D L+ +FG+FG L V+++ +E G SKGFGFV+FE DA +A ++++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 243 GTVVEGRKIEVNNATARV 260
G + G++I V A +V
Sbjct: 253 GKELNGKQIYVGRAQKKV 270
Score = 57.0 bits (136), Expect = 3e-08
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 178 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRA 237
KS + + N+ + L F FG IL +++ +E GSKG+GFV FE A+RA
Sbjct: 95 KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERA 154
Query: 238 REKLHGTVVEGRKIEVNNATAR 259
EK++G ++ RK+ V +R
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSR 176
Score = 47.0 bits (110), Expect = 4e-05
Identities = 26/93 (27%), Positives = 48/93 (51%)
Query: 161 QTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS 220
QT+ ++ Q ++ ++ L+V N+ D LR+ F FG I +++ S
Sbjct: 273 QTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRS 332
Query: 221 KGFGFVTFENSADADRAREKLHGTVVEGRKIEV 253
KGFGFV F + +A +A +++G +V + + V
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Score = 35.8 bits (81), Expect = 0.082
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 184 LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN--ERGSKGFGFVTFENSADADRAREKL 241
L+V ++ + L + F G IL + + + R S G+ +V F+ ADA+RA + +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 242 HGTVVEGRKIEV 253
+ V++G+ + +
Sbjct: 73 NFDVIKGKPVRI 84
>gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]
Length = 378
Score = 58.2 bits (139), Expect = 2e-08
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 139 GEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDL 198
G P T G Q E +G Q +S +NS+S ++ V IP + +L
Sbjct: 77 GRNIDPKPCTPRGM--QPERTRPKEGWQKGPRS-DNSKSN----KIFVGGIPHNCGETEL 129
Query: 199 RQMFGQFGKILDVEIIFN--ERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 256
R+ F +FG + +V +I++ ++ +GFGF+TFE+ D+A +H + G+K+EV A
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA-VNMHFHDIMGKKVEVKRA 188
Query: 257 TARVMTNKKMVTPYANGWKLSPVVGAVYG 285
R ++ P A+ W V A G
Sbjct: 189 EPRDSKSQAPGQPGASQWGSRVVPNAANG 217
Score = 32.0 bits (71), Expect = 1.2
Identities = 38/143 (26%), Positives = 47/143 (32%), Gaps = 15/143 (10%)
Query: 2 AEGAQPQQPPQLGPGAAARGMKRESELELPV--PGAGGDGADPGLSKRPRTEEAAADGGG 59
A G Q PP G +GM + + P G GA P P T + G
Sbjct: 215 ANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYGPPPAGRGAPP--PPPPFTSYIVSTPPG 272
Query: 60 GMQNEPLTPGYHGFPARDSQGNQEPTTTPDAMVQPFTTIP----------FPPPPQNGIP 109
G P +G P + S G P PD P P FPPPP P
Sbjct: 273 GFPPPQGFPQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPATPGAAPLAFPPPPSQAAP 332
Query: 110 TEYGVPHTQDYAGQTGEHNLTLY 132
+ P T G++ L Y
Sbjct: 333 -DMSKPPTAQPDFPYGQYGLGSY 354
>gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]
Length = 407
Score = 58.2 bits (139), Expect = 2e-08
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 139 GEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDL 198
G P T G Q E +G Q +S +NS+S ++ V IP + +L
Sbjct: 77 GRNIDPKPCTPRGM--QPERTRPKEGWQKGPRS-DNSKSN----KIFVGGIPHNCGETEL 129
Query: 199 RQMFGQFGKILDVEIIFN--ERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 256
R+ F +FG + +V +I++ ++ +GFGF+TFE+ D+A +H + G+K+EV A
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA-VNMHFHDIMGKKVEVKRA 188
Query: 257 TARVMTNKKMVTPYANGWKLSPVVGAVYG 285
R ++ P A+ W V A G
Sbjct: 189 EPRDSKSQAPGQPGASQWGSRVVPNAANG 217
Score = 37.4 bits (85), Expect = 0.028
Identities = 48/177 (27%), Positives = 57/177 (32%), Gaps = 17/177 (9%)
Query: 2 AEGAQPQQPPQLGPGAAARGMKRESELELPV--PGAGGDGADPGLSKRPRTEEAAADGGG 59
A G Q PP G +GM + + P G GA P P T + G
Sbjct: 215 ANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYGPPPAGRGAPP--PPPPFTSYIVSTPPG 272
Query: 60 GMQNEPLTPGYHGFPARDSQGNQEPTTTPDAMVQPFTTIP----------FPPPPQNGIP 109
G P +G P + S G P PD P P FPPPP P
Sbjct: 273 GFPPPQGFPQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPATPGAAPLAFPPPPSQAAP 332
Query: 110 TEYGVPHTQ-DYA-GQTGEHNLTLYGSTQAHGEQSSNSPSTQNGSLTQTEGGAQTDG 164
P Q D+ GQ + L G Q + S PS G GG G
Sbjct: 333 DMSKPPTAQPDFPYGQYAGYGQDLSGFGQGFSDPSQQPPS-YGGPSVPGSGGPPAGG 388
>gi|14719414 boule isoform 2 [Homo sapiens]
Length = 283
Score = 58.2 bits (139), Expect = 2e-08
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 181 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 239
P R+ V I F+ + DLR+ F Q+G + +V+I+ + G SKG+GFVTFE DA + +
Sbjct: 32 PNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQ 91
Query: 240 KLHGTVVEGRKIEVNNATAR--VMTNKKMVTPYANGWKLSPVVGAVY 284
+ + +K+ + A + V + + P A L+ G Y
Sbjct: 92 EAEKLNYKDKKLNIGPAIRKQQVGIPRSSIMPAAGTMYLTTSTGYPY 138
>gi|4759098 splicing factor, arginine/serine-rich 10 [Homo sapiens]
Length = 288
Score = 58.2 bits (139), Expect = 2e-08
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 16/97 (16%)
Query: 174 NSESKSTPKRLHVSN--------------IPFRFRDPDLRQMFGQFGKILDVEIIFNE-- 217
+S S + +R HV N + + DLR++F ++G I DV I++++
Sbjct: 96 HSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQS 155
Query: 218 RGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVN 254
R S+GF FV FEN DA A+E+ +G ++GR+I V+
Sbjct: 156 RRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 192
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.132 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,507,123
Number of Sequences: 37866
Number of extensions: 1156173
Number of successful extensions: 7026
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 476
Number of HSP's that attempted gapping in prelim test: 5197
Number of HSP's gapped (non-prelim): 1864
length of query: 451
length of database: 18,247,518
effective HSP length: 106
effective length of query: 345
effective length of database: 14,233,722
effective search space: 4910634090
effective search space used: 4910634090
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.