A2BP1 15066

Name: A2BP1	Sequence: fasta or formatted (392aa)		NCBI GI: 22538407
Description: ataxin 2-binding protein 1 isoform 2		Referenced in: Cerebellum RNA-binding Proteins
Other entries for this name: alt prot [370aa] ataxin 2-binding protein 1 isoform 5 alt prot [397aa] ataxin 2-binding protein 1 isoform 4 alt prot [397aa] ataxin 2-binding protein 1 isoform 4 alt prot [418aa] ataxin 2-binding protein 1 isoform 1 alt prot [395aa] ataxin 2-binding protein 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 14.3 56 4 C cysteine 0.3 1 1 D aspartate 3.1 12 2 E glutamate 4.1 16 1 F phenylalanine 3.3 13 1 G glycine 8.4 33 2 H histidine 2.6 10 2 I isoleucine 2.6 10 2 K lysine 2.6 10 2 L leucine 4.8 19 2 M methionine 2.0 8 1 N asparagine 4.6 18 2 P proline 11.0 43 4 Q glutamine 5.6 22 1 R arginine 4.6 18 1 S serine 5.4 21 2 T threonine 7.4 29 2 V valine 6.1 24 2 W tryptophan 0.3 1 1 Y tyrosine 7.1 28 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ataxin 2-binding protein 1 isoform 2 A2BP1 0.982 ataxin 2-binding protein 1 isoform 1 A2BP1 0.893 ataxin 2-binding protein 1 isoform 3 A2BP1 0.883 ataxin 2-binding protein 1 isoform 4 A2BP1 0.883 ataxin 2-binding protein 1 isoform 4 A2BP1 0.796 ataxin 2-binding protein 1 isoform 5 RBM9 0.561 RNA binding motif protein 9 isoform 5 RBM9 0.552 RNA binding motif protein 9 isoform 6 RBM9 0.552 RNA binding motif protein 9 isoform 1 HRNBP3 0.552 hexaribonucleotide binding protein 3 RBM9 0.550 RNA binding motif protein 9 isoform 3 RBM9 0.432 RNA binding motif protein 9 isoform 2 RBM9 0.425 RNA binding motif protein 9 isoform 4 DAZAP1 0.049 DAZ associated protein 1 isoform a DAZAP1 0.049 DAZ associated protein 1 isoform b BOLL 0.047 boule isoform 1 BOLL 0.046 boule isoform 2 SFPQ 0.045 splicing factor proline/glutamine rich (polypyrimidin... PABPC4 0.043 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... PABPC4 0.043 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... PABPC4 0.043 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... PABPC3 0.043 poly(A) binding protein, cytoplasmic 3 TRA2B 0.043 splicing factor, arginine/serine-rich 10 PABPC1 0.043 poly(A) binding protein, cytoplasmic 1 RBM39 0.041 RNA binding motif protein 39 isoform b RBM39 0.041 RNA binding motif protein 39 isoform a DAZ1 0.041 deleted in azoospermia DAZ4 0.041 deleted in azoospermia 4 isoform 1 BRUNOL5 0.041 bruno-like 5, RNA binding protein isoform 1 TIA1 0.040 TIA1 protein isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.