Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DAZAP1 Sequence: fasta or formatted (378aa) NCBI GI: 25470890
Description:

DAZ associated protein 1 isoform a

Referenced in:

hnRNP
Testes and Sperm

Other entries for this name:
alt prot [407aa] DAZ associated protein 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         25           2
 C cysteine            1.3          5           1
 D aspartate           4.5         17           1
 E glutamate           3.7         14           1
 F phenylalanine       5.6         21           1
 G glycine            12.4         47           2
 H histidine           1.3          5           1
 I isoleucine          2.6         10           1
 K lysine              4.8         18           2
 L leucine             2.6         10           1
 M methionine          2.4          9           1
 N asparagine          2.9         11           2
 P proline            16.7         63           6
 Q glutamine           6.1         23           2
 R arginine            4.2         16           1
 S serine              6.3         24           2
 T threonine           4.5         17           2
 V valine              6.3         24           2
 W tryptophan          1.6          6           1
 Y tyrosine            3.4         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DAZ associated protein 1 isoform a 
DAZAP1                0.924   DAZ associated protein 1 isoform b 
MSI2                  0.191   musashi 2 isoform a 
MSI1                  0.185   musashi 1 
MSI2                  0.179   musashi 2 isoform b 
HNRNPAB               0.173   heterogeneous nuclear ribonucleoprotein A/B isoform ...
HNRNPA2B1             0.162   heterogeneous nuclear ribonucleoprotein A2/B1 isofor...
HNRNPA2B1             0.162   heterogeneous nuclear ribonucleoprotein A2/B1 isoform...
HNRNPD                0.161   heterogeneous nuclear ribonucleoprotein D isoform b ...
HNRNPAB               0.160   heterogeneous nuclear ribonucleoprotein A/B isoform ...
HNRNPD                0.157   heterogeneous nuclear ribonucleoprotein D isoform a ...
HNRPDL                0.151   heterogeneous nuclear ribonucleoprotein D-like [Homo...
HNRNPA1               0.151   heterogeneous nuclear ribonucleoprotein A1 isoform b...
HNRNPA1L2             0.149   heterogeneous nuclear ribonucleoprotein A1-like [Hom...
HNRNPA1L2             0.149   heterogeneous nuclear ribonucleoprotein A1-like [Hom...
HNRNPA1               0.147   heterogeneous nuclear ribonucleoprotein A1 isoform a ...
HNRNPA3               0.146   heterogeneous nuclear ribonucleoprotein A3 
HNRNPD                0.145   heterogeneous nuclear ribonucleoprotein D isoform d ...
HNRNPD                0.142   heterogeneous nuclear ribonucleoprotein D isoform c ...
HNRNPA0               0.141   heterogeneous nuclear ribonucleoprotein A0 
LOC120364             0.126   PREDICTED: similar to heterogeneous nuclear ribonuc...
LOC120364             0.126   PREDICTED: similar to heterogeneous nuclear ribonucl...
LOC120364             0.126   PREDICTED: similar to heterogeneous nuclear ribonucl...
SF3B4                 0.092   splicing factor 3b, subunit 4 
TARDBP                0.087   TAR DNA binding protein 
TIAL1                 0.086   TIA-1 related protein isoform 2 
TIAL1                 0.086   TIA-1 related protein isoform 1 
WASL                  0.069   Wiskott-Aldrich syndrome gene-like protein 
RBMX                  0.069   RNA binding motif protein, X-linked 
PRB1                  0.068   proline-rich protein BstNI subfamily 1 isoform 1 pre...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press