A2BP1 13300

Name: A2BP1	Sequence: fasta or formatted (370aa)		NCBI GI: 215272410
Description: ataxin 2-binding protein 1 isoform 5		Referenced in: Cerebellum RNA-binding Proteins
Other entries for this name: alt prot [397aa] ataxin 2-binding protein 1 isoform 4 alt prot [397aa] ataxin 2-binding protein 1 isoform 4 alt prot [418aa] ataxin 2-binding protein 1 isoform 1 alt prot [392aa] ataxin 2-binding protein 1 isoform 2 alt prot [395aa] ataxin 2-binding protein 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 14.9 55 4 C cysteine 0.3 1 1 D aspartate 4.6 17 2 E glutamate 4.3 16 1 F phenylalanine 4.1 15 1 G glycine 8.1 30 2 H histidine 2.7 10 2 I isoleucine 2.4 9 2 K lysine 2.7 10 2 L leucine 3.8 14 1 M methionine 1.4 5 1 N asparagine 4.9 18 2 P proline 10.0 37 4 Q glutamine 5.1 19 1 R arginine 5.7 21 1 S serine 4.6 17 2 T threonine 7.8 29 2 V valine 5.7 21 2 W tryptophan 0.3 1 1 Y tyrosine 6.8 25 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ataxin 2-binding protein 1 isoform 5 A2BP1 0.978 ataxin 2-binding protein 1 isoform 4 A2BP1 0.978 ataxin 2-binding protein 1 isoform 4 A2BP1 0.927 ataxin 2-binding protein 1 isoform 1 A2BP1 0.841 ataxin 2-binding protein 1 isoform 2 A2BP1 0.746 ataxin 2-binding protein 1 isoform 3 HRNBP3 0.628 hexaribonucleotide binding protein 3 RBM9 0.587 RNA binding motif protein 9 isoform 5 RBM9 0.579 RNA binding motif protein 9 isoform 3 RBM9 0.578 RNA binding motif protein 9 isoform 6 RBM9 0.578 RNA binding motif protein 9 isoform 1 RBM9 0.443 RNA binding motif protein 9 isoform 2 RBM9 0.433 RNA binding motif protein 9 isoform 4 DAZAP1 0.059 DAZ associated protein 1 isoform a DAZAP1 0.059 DAZ associated protein 1 isoform b BOLL 0.053 boule isoform 1 BOLL 0.051 boule isoform 2 PABPC1L 0.050 poly(A)-binding protein, cytoplasmic 1-like PABPC4 0.046 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... PABPC4 0.046 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... PABPC4 0.046 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... PABPC3 0.046 poly(A) binding protein, cytoplasmic 3 TRA2B 0.046 splicing factor, arginine/serine-rich 10 PABPC1 0.046 poly(A) binding protein, cytoplasmic 1 DAZ1 0.045 deleted in azoospermia DAZ4 0.045 deleted in azoospermia 4 isoform 1 SFPQ 0.045 splicing factor proline/glutamine rich (polypyrimidin... RBM39 0.043 RNA binding motif protein 39 isoform b RBM39 0.043 RNA binding motif protein 39 isoform a RBM24 0.042 RNA binding motif protein 24 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.