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Search of human proteins with 133925799
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|133925799 RNA binding motif protein 9 isoform 3 [Homo
sapiens]
(376 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|133925799 RNA binding motif protein 9 isoform 3 [Homo sapiens] 764 0.0
gi|72534682 RNA binding motif protein 9 isoform 1 [Homo sapiens] 758 0.0
gi|133925805 RNA binding motif protein 9 isoform 6 [Homo sapiens] 744 0.0
gi|133925803 RNA binding motif protein 9 isoform 5 [Homo sapiens] 739 0.0
gi|7657504 RNA binding motif protein 9 isoform 2 [Homo sapiens] 598 e-171
gi|133925801 RNA binding motif protein 9 isoform 4 [Homo sapiens] 597 e-171
gi|215272412 ataxin 2-binding protein 1 isoform 4 [Homo sapiens] 459 e-129
gi|22538403 ataxin 2-binding protein 1 isoform 4 [Homo sapiens] 459 e-129
gi|22538407 ataxin 2-binding protein 1 isoform 2 [Homo sapiens] 456 e-128
gi|215272410 ataxin 2-binding protein 1 isoform 5 [Homo sapiens] 454 e-128
gi|22538405 ataxin 2-binding protein 1 isoform 1 [Homo sapiens] 441 e-124
gi|22538409 ataxin 2-binding protein 1 isoform 3 [Homo sapiens] 390 e-109
gi|128485756 hexaribonucleotide binding protein 3 [Homo sapiens] 390 e-109
gi|189181654 deleted in azoospermia [Homo sapiens] 64 2e-10
gi|54292113 deleted in azoospermia 4 isoform 1 [Homo sapiens] 64 2e-10
gi|221139802 RNA binding motif protein 24 isoform 1 [Homo sapiens] 62 8e-10
gi|62244004 modulator of estrogen induced transcription isoform ... 60 3e-09
gi|63176611 modulator of estrogen induced transcription isoform ... 60 3e-09
gi|4757926 RNA binding motif protein 39 isoform b [Homo sapiens] 60 4e-09
gi|35493811 RNA binding motif protein 39 isoform a [Homo sapiens] 60 4e-09
gi|37574731 boule isoform 1 [Homo sapiens] 59 5e-09
gi|45238849 poly(A) binding protein, cytoplasmic 3 [Homo sapiens] 59 5e-09
gi|208431836 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... 59 7e-09
gi|4504715 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... 59 7e-09
gi|208431833 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... 59 7e-09
gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens] 59 9e-09
gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens] 59 9e-09
gi|46367787 poly(A) binding protein, cytoplasmic 1 [Homo sapiens] 59 9e-09
gi|14719414 boule isoform 2 [Homo sapiens] 58 1e-08
gi|4759098 splicing factor, arginine/serine-rich 10 [Homo sapiens] 58 1e-08
>gi|133925799 RNA binding motif protein 9 isoform 3 [Homo sapiens]
Length = 376
Score = 764 bits (1974), Expect = 0.0
Identities = 376/376 (100%), Positives = 376/376 (100%)
Query: 1 MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT 60
MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT
Sbjct: 1 MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT 60
Query: 61 LYGSTQAHGEQSSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 120
LYGSTQAHGEQSSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF
Sbjct: 61 LYGSTQAHGEQSSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 120
Query: 121 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 180
RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 121 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 180
Query: 181 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGR 240
EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGR
Sbjct: 181 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGR 240
Query: 241 GGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQD 300
GGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQD
Sbjct: 241 GGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQD 300
Query: 301 GFYGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPYHALAPAASYGVG 360
GFYGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPYHALAPAASYGVG
Sbjct: 301 GFYGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPYHALAPAASYGVG 360
Query: 361 AVASLYRGGYSRFAPY 376
AVASLYRGGYSRFAPY
Sbjct: 361 AVASLYRGGYSRFAPY 376
>gi|72534682 RNA binding motif protein 9 isoform 1 [Homo sapiens]
Length = 380
Score = 758 bits (1958), Expect = 0.0
Identities = 375/380 (98%), Positives = 376/380 (98%), Gaps = 4/380 (1%)
Query: 1 MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT 60
MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT
Sbjct: 1 MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT 60
Query: 61 LYGSTQAHGEQSSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 120
LYGSTQAHGEQSSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF
Sbjct: 61 LYGSTQAHGEQSSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 120
Query: 121 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 180
RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 121 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 180
Query: 181 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGR 240
EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGR
Sbjct: 181 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGR 240
Query: 241 GGINTYIPLI----IPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGV 296
GGINTYIPLI +PGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGV
Sbjct: 241 GGINTYIPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGV 300
Query: 297 VYQDGFYGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPYHALAPAAS 356
VYQDGFYGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPYHALAPAAS
Sbjct: 301 VYQDGFYGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPYHALAPAAS 360
Query: 357 YGVGAVASLYRGGYSRFAPY 376
YGVGAVASLYRGGYSRFAPY
Sbjct: 361 YGVGAVASLYRGGYSRFAPY 380
>gi|133925805 RNA binding motif protein 9 isoform 6 [Homo sapiens]
Length = 450
Score = 744 bits (1920), Expect = 0.0
Identities = 367/373 (98%), Positives = 369/373 (98%), Gaps = 4/373 (1%)
Query: 8 TQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA 67
+QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA
Sbjct: 78 SQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA 137
Query: 68 HGEQSSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDL 127
HGEQSSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDL
Sbjct: 138 HGEQSSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDL 197
Query: 128 RQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATA 187
RQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATA
Sbjct: 198 RQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATA 257
Query: 188 RVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTYI 247
RVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTYI
Sbjct: 258 RVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTYI 317
Query: 248 PLI----IPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQDGFY 303
PLI +PGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQDGFY
Sbjct: 318 PLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQDGFY 377
Query: 304 GADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPYHALAPAASYGVGAVA 363
GADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPYHALAPAASYGVGAVA
Sbjct: 378 GADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPYHALAPAASYGVGAVA 437
Query: 364 SLYRGGYSRFAPY 376
SLYRGGYSRFAPY
Sbjct: 438 SLYRGGYSRFAPY 450
>gi|133925803 RNA binding motif protein 9 isoform 5 [Homo sapiens]
Length = 451
Score = 739 bits (1908), Expect = 0.0
Identities = 367/374 (98%), Positives = 369/374 (98%), Gaps = 5/374 (1%)
Query: 8 TQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA 67
+QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA
Sbjct: 78 SQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQA 137
Query: 68 HGEQSSNSPSTQNGSLT-TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD 126
HGEQSSNSPSTQNGSLT TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD
Sbjct: 138 HGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPD 197
Query: 127 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 186
LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT
Sbjct: 198 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 257
Query: 187 ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY 246
ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY
Sbjct: 258 ARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTY 317
Query: 247 IPLI----IPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQDGF 302
IPLI +PGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQDGF
Sbjct: 318 IPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQDGF 377
Query: 303 YGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPYHALAPAASYGVGAV 362
YGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPYHALAPAASYGVGAV
Sbjct: 378 YGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPYHALAPAASYGVGAV 437
Query: 363 ASLYRGGYSRFAPY 376
ASLYRGGYSRFAPY
Sbjct: 438 ASLYRGGYSRFAPY 451
>gi|7657504 RNA binding motif protein 9 isoform 2 [Homo sapiens]
Length = 367
Score = 598 bits (1543), Expect = e-171
Identities = 297/300 (99%), Positives = 297/300 (99%), Gaps = 1/300 (0%)
Query: 1 MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT 60
MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT
Sbjct: 1 MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT 60
Query: 61 LYGSTQAHGEQSSNSPSTQNGSLT-TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIP 119
LYGSTQAHGEQSSNSPSTQNGSLT TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIP
Sbjct: 61 LYGSTQAHGEQSSNSPSTQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIP 120
Query: 120 FRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRK 179
FRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRK
Sbjct: 121 FRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRK 180
Query: 180 IEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSG 239
IEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSG
Sbjct: 181 IEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSG 240
Query: 240 RGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVVYQ 299
RGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGV Q
Sbjct: 241 RGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGVDMQ 300
>gi|133925801 RNA binding motif protein 9 isoform 4 [Homo sapiens]
Length = 370
Score = 597 bits (1539), Expect = e-171
Identities = 296/303 (97%), Positives = 297/303 (98%), Gaps = 4/303 (1%)
Query: 1 MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT 60
MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT
Sbjct: 1 MEKKKMVTQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLT 60
Query: 61 LYGSTQAHGEQSSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 120
LYGSTQAHGEQSSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF
Sbjct: 61 LYGSTQAHGEQSSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 120
Query: 121 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 180
RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 121 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 180
Query: 181 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGR 240
EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGR
Sbjct: 181 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGR 240
Query: 241 GGINTYIPLI----IPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGV 296
GGINTYIPLI +PGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGV
Sbjct: 241 GGINTYIPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVPPTAIPAYPGV 300
Query: 297 VYQ 299
Q
Sbjct: 301 DMQ 303
>gi|215272412 ataxin 2-binding protein 1 isoform 4 [Homo sapiens]
Length = 397
Score = 459 bits (1181), Expect = e-129
Identities = 259/406 (63%), Positives = 278/406 (68%), Gaps = 55/406 (13%)
Query: 9 QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ---DYAGQTG--EHNLTLYG 63
+GNQE PD M QP+ + F PP QNGIP EY PH +Y GQT EH L LY
Sbjct: 9 RGNQEAAAAPDTMAQPYASAQFAPP-QNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYP 67
Query: 64 STQAHGEQSSNSPSTQNGSLT---TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 120
Q H EQS S Q S T T+ A TDGQ QTQ SEN+E+KS PKRLHVSNIPF
Sbjct: 68 PAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQP-QTQPSENTENKSQPKRLHVSNIPF 126
Query: 121 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 180
RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 127 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 186
Query: 181 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSF--QADVSLGNDAAVPLS 238
EVNNATARVMTNKK V PY NGWKL+PVVGAVY PE YA + QA+ + + P S
Sbjct: 187 EVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSS 246
Query: 239 GRGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVR-AVPPTAIPAYPGVV 297
+PGFPYP AAT AAA+RGAHLRGRGRTVY R A PP IPAY GVV
Sbjct: 247 ------LVYTSAMPGFPYP-AATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVV 299
Query: 298 YQDGFYGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPY-HALAPAAS 356
YQDGFYGAD+YGGYAAYRYAQP AT AAAYSD YGRVY ADPY HALAPA +
Sbjct: 300 YQDGFYGADIYGGYAAYRYAQPTPAT--------AAAYSDSYGRVYAADPYHHALAPAPT 351
Query: 357 YGVGAV--------------------------ASLYRGGYSRFAPY 376
YGVGA+ AS+YRGGY+RFAPY
Sbjct: 352 YGVGAMNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYNRFAPY 397
>gi|22538403 ataxin 2-binding protein 1 isoform 4 [Homo sapiens]
Length = 397
Score = 459 bits (1181), Expect = e-129
Identities = 259/406 (63%), Positives = 278/406 (68%), Gaps = 55/406 (13%)
Query: 9 QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ---DYAGQTG--EHNLTLYG 63
+GNQE PD M QP+ + F PP QNGIP EY PH +Y GQT EH L LY
Sbjct: 9 RGNQEAAAAPDTMAQPYASAQFAPP-QNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYP 67
Query: 64 STQAHGEQSSNSPSTQNGSLT---TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 120
Q H EQS S Q S T T+ A TDGQ QTQ SEN+E+KS PKRLHVSNIPF
Sbjct: 68 PAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQP-QTQPSENTENKSQPKRLHVSNIPF 126
Query: 121 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 180
RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 127 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 186
Query: 181 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSF--QADVSLGNDAAVPLS 238
EVNNATARVMTNKK V PY NGWKL+PVVGAVY PE YA + QA+ + + P S
Sbjct: 187 EVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSS 246
Query: 239 GRGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVR-AVPPTAIPAYPGVV 297
+PGFPYP AAT AAA+RGAHLRGRGRTVY R A PP IPAY GVV
Sbjct: 247 ------LVYTSAMPGFPYP-AATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVV 299
Query: 298 YQDGFYGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPY-HALAPAAS 356
YQDGFYGAD+YGGYAAYRYAQP AT AAAYSD YGRVY ADPY HALAPA +
Sbjct: 300 YQDGFYGADIYGGYAAYRYAQPTPAT--------AAAYSDSYGRVYAADPYHHALAPAPT 351
Query: 357 YGVGAV--------------------------ASLYRGGYSRFAPY 376
YGVGA+ AS+YRGGY+RFAPY
Sbjct: 352 YGVGAMNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYNRFAPY 397
>gi|22538407 ataxin 2-binding protein 1 isoform 2 [Homo sapiens]
Length = 392
Score = 456 bits (1172), Expect = e-128
Identities = 255/381 (66%), Positives = 273/381 (71%), Gaps = 30/381 (7%)
Query: 9 QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ---DYAGQTG--EHNLTLYG 63
QGNQE PD M QP+ + F PP QNGIP EY PH +Y GQT EH L LY
Sbjct: 29 QGNQEAAAAPDTMAQPYASAQFAPP-QNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYP 87
Query: 64 STQAHGEQSSNSPSTQNGSLT---TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 120
Q H EQS S Q S T T+ A TDGQ QTQ SEN+E+KS PKRLHVSNIPF
Sbjct: 88 PAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQP-QTQPSENTENKSQPKRLHVSNIPF 146
Query: 121 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 180
RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 147 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 206
Query: 181 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSF--QADVSLGNDAAVPLS 238
EVNNATARVMTNKK V PY NGWKL+PVVGAVY PE YA + QA+ + + P S
Sbjct: 207 EVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSS 266
Query: 239 GRGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVR-AVPPTAIPAYPGVV 297
+PGFPYP AAT AAA+RGAHLRGRGRTVY R A PP IPAY GVV
Sbjct: 267 ------LVYTSAMPGFPYP-AATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVV 319
Query: 298 YQDGFYGAD-LYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPY-HALAPAA 355
YQ+ YG L GGYAAYRYAQP AT AAAYSD YGRVY ADPY HALAPA
Sbjct: 320 YQEPVYGNKLLQGGYAAYRYAQPTPAT--------AAAYSDSYGRVYAADPYHHALAPAP 371
Query: 356 SYGVGAVASLYRGGYSRFAPY 376
+YGVGA+AS+YRGGY+RFAPY
Sbjct: 372 TYGVGAMASIYRGGYNRFAPY 392
>gi|215272410 ataxin 2-binding protein 1 isoform 5 [Homo sapiens]
Length = 370
Score = 454 bits (1169), Expect = e-128
Identities = 255/404 (63%), Positives = 270/404 (66%), Gaps = 78/404 (19%)
Query: 9 QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ---DYAGQTG--EHNLTLYG 63
+GNQE PD M QP+ + F PP QNGIP EY PH +Y GQT EH L LY
Sbjct: 9 RGNQEAAAAPDTMAQPYASAQFAPP-QNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYP 67
Query: 64 STQAHGEQSSNSPSTQNGSLT---TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 120
Q H EQS S Q S T T+ A TDGQ QTQ SEN+E+KS PKRLHVSNIPF
Sbjct: 68 PAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQP-QTQPSENTENKSQPKRLHVSNIPF 126
Query: 121 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 180
RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 127 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 186
Query: 181 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGR 240
EVNNATARVMTNKK V PY NGWKL+PVVGAVY PE YA
Sbjct: 187 EVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYA--------------------- 225
Query: 241 GGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVR-AVPPTAIPAYPGVVYQ 299
+PGFPYP AAT AAA+RGAHLRGRGRTVY R A PP IPAY GVVYQ
Sbjct: 226 ----------VPGFPYP-AATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQ 274
Query: 300 DGFYGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPY-HALAPAASYG 358
DGFYGAD+YGGYAAYRYAQP AT AAAYSD YGRVY ADPY HALAPA +YG
Sbjct: 275 DGFYGADIYGGYAAYRYAQPTPAT--------AAAYSDSYGRVYAADPYHHALAPAPTYG 326
Query: 359 VGAV--------------------------ASLYRGGYSRFAPY 376
VGA+ AS+YRGGY+RFAPY
Sbjct: 327 VGAMNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYNRFAPY 370
>gi|22538405 ataxin 2-binding protein 1 isoform 1 [Homo sapiens]
Length = 418
Score = 441 bits (1135), Expect = e-124
Identities = 255/407 (62%), Positives = 273/407 (67%), Gaps = 56/407 (13%)
Query: 9 QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ---DYAGQTG--EHNLTLYG 63
QGNQE PD M QP+ + F PP QNGIP EY PH +Y GQT EH L LY
Sbjct: 29 QGNQEAAAAPDTMAQPYASAQFAPP-QNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYP 87
Query: 64 STQAHGEQSSNSPSTQNGSLT---TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 120
Q H EQS S Q S T T+ A TDGQ QTQ SEN+E+KS PKRLHVSNIPF
Sbjct: 88 PAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQP-QTQPSENTENKSQPKRLHVSNIPF 146
Query: 121 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 180
RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 147 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 206
Query: 181 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSF--QADVSLGNDAAVPLS 238
EVNNATARVMTNKK V PY NGWKL+PVVGAVY PE YA + QA+ + + P S
Sbjct: 207 EVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSS 266
Query: 239 GRGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVR-AVPPTAIPAYPGVV 297
+PGFPYP AAT AAA+RGAHLRGRGRTVY R A PP IPAY GVV
Sbjct: 267 ------LVYTSAMPGFPYP-AATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVV 319
Query: 298 YQDGFYGAD-LYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTADPY-HALAPAA 355
YQ+ YG L GGYAAYRYAQP AT AAAYSD YGRVY ADPY HALAPA
Sbjct: 320 YQEPVYGNKLLQGGYAAYRYAQPTPAT--------AAAYSDSYGRVYAADPYHHALAPAP 371
Query: 356 SYGVGAV--------------------------ASLYRGGYSRFAPY 376
+YGVGA+ AS+YRGGY+RFAPY
Sbjct: 372 TYGVGAMNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYNRFAPY 418
>gi|22538409 ataxin 2-binding protein 1 isoform 3 [Homo sapiens]
Length = 395
Score = 390 bits (1003), Expect = e-109
Identities = 225/349 (64%), Positives = 240/349 (68%), Gaps = 29/349 (8%)
Query: 9 QGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ---DYAGQTG--EHNLTLYG 63
QGNQE PD M QP+ + F PP QNGIP EY PH +Y GQT EH L LY
Sbjct: 29 QGNQEAAAAPDTMAQPYASAQFAPP-QNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYP 87
Query: 64 STQAHGEQSSNSPSTQNGSLT---TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPF 120
Q H EQS S Q S T T+ A TDGQ QTQ SEN+E+KS PKRLHVSNIPF
Sbjct: 88 PAQTHSEQSPADTSAQTVSGTATQTDDAAPTDGQP-QTQPSENTENKSQPKRLHVSNIPF 146
Query: 121 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 180
RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI
Sbjct: 147 RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 206
Query: 181 EVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSF--QADVSLGNDAAVPLS 238
EVNNATARVMTNKK V PY NGWKL+PVVGAVY PE YA + QA+ + + P S
Sbjct: 207 EVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSS 266
Query: 239 GRGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVR-AVPPTAIPAYPGVV 297
+PGFPYP AAT AAA+RGAHLRGRGRTVY R A PP IPAY GVV
Sbjct: 267 ------LVYTSAMPGFPYP-AATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVV 319
Query: 298 YQDGFYGAD-LYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTA 345
YQ+ YG L GGYAAYRYAQP AT AAAYSD V+ A
Sbjct: 320 YQEPVYGNKLLQGGYAAYRYAQPTPAT--------AAAYSDRNQFVFVA 360
>gi|128485756 hexaribonucleotide binding protein 3 [Homo sapiens]
Length = 312
Score = 390 bits (1003), Expect = e-109
Identities = 218/356 (61%), Positives = 238/356 (66%), Gaps = 58/356 (16%)
Query: 21 MVQPFTTIPFPPPPQNGIPTEYGVPH---TQDYAGQTG---EHNLTLYGSTQAHGEQSSN 74
M QP+ +PPPPQNGIP EY P TQDY+GQT EH +TLY Q H EQ +
Sbjct: 1 MAQPYPPAQYPPPPQNGIPAEYAPPPPHPTQDYSGQTPVPTEHGMTLYTPAQTHPEQPGS 60
Query: 75 SPSTQN--GSLT---TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQ 129
STQ G+ T T+ AQTD SQ + K PKRLHVSNIPFRFRDPDLRQ
Sbjct: 61 EASTQPIAGTQTVPQTDEAAQTD---SQPLHPSDPTEKQQPKRLHVSNIPFRFRDPDLRQ 117
Query: 130 MFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARV 189
MFGQFGKILDVEIIFNERGSKGFGFVTFE S+DADRAREKL+GT+VEGRKIEVNNATARV
Sbjct: 118 MFGQFGKILDVEIIFNERGSKGFGFVTFETSSDADRAREKLNGTIVEGRKIEVNNATARV 177
Query: 190 MTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLGNDAAVPLSGRGGINTYIPL 249
MTNKK PY NGWKL+PVVGAVYGPE YA
Sbjct: 178 MTNKKTGNPYTNGWKLNPVVGAVYGPEFYA------------------------------ 207
Query: 250 IIPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAV-PPTAIPAYPGVVYQDGFYGADLY 308
+ GFPYPT TA A+RGAHLRGRGR VY RA PP IP Y VVYQDGFYGA++Y
Sbjct: 208 -VTGFPYPTTG-TAVAYRGAHLRGRGRAVYNTFRAAPPPPPIPTYGAVVYQDGFYGAEIY 265
Query: 309 GGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVY-TADPY-HALAPAASYGVGAV 362
GGYAAYRYAQP AAAAAAYSD YGRVY ADPY H + PAA+Y +G +
Sbjct: 266 GGYAAYRYAQP---------AAAAAAYSDSYGRVYAAADPYHHTIGPAATYSIGTM 312
>gi|189181654 deleted in azoospermia [Homo sapiens]
Length = 744
Score = 64.3 bits (155), Expect = 2e-10
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 22 VQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNG 81
VQP + PPPP + P+T+ Y + +T TQ QS+ +P T N
Sbjct: 124 VQPRPLVVNPPPPPQ-FQNVWRNPNTETYL----QPQITPNPVTQH--VQSAANPETPNS 176
Query: 82 SLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVE 141
+++ E Q+ + +Q E K P + V I R + ++ FG++G + +V+
Sbjct: 177 TISREASTQSSSAAA-SQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVK 235
Query: 142 IIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATARVMTNKKMVTP 198
II N G SKG+GFV+F N D +K+ G+ + G+K+++ A + + V P
Sbjct: 236 IITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRKQKLCARHVQP 291
Score = 64.3 bits (155), Expect = 2e-10
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 22 VQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNG 81
VQP + PPPP + P+T+ Y + +T TQ QS+ +P T N
Sbjct: 289 VQPRPLVVNPPPPPQ-FQNVWRNPNTETYL----QPQITPNPVTQH--VQSAANPETPNS 341
Query: 82 SLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVE 141
+++ E Q+ + +Q E K P + V I R + ++ FG++G + +V+
Sbjct: 342 TISREASTQSSSAAA-SQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVK 400
Query: 142 IIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATARVMTNKKMVTP 198
II N G SKG+GFV+F N D +K+ G+ + G+K+++ A + + V P
Sbjct: 401 IITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRKQKLCARHVQP 456
Score = 57.0 bits (136), Expect = 3e-08
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 72 SSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMF 131
S+ +P T N +++ E Q+ + +Q E K P + V I R + ++ F
Sbjct: 2 SAANPETPNSTISREASTQSSSAAA-SQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
Query: 132 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 188
G++G + +V+II N G SKG+GFV+F N D +K+ G+ + G+K+++ A +
Sbjct: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
Query: 189 VMTNKKMVTP 198
+ V P
Sbjct: 117 QKLCARHVQP 126
>gi|54292113 deleted in azoospermia 4 isoform 1 [Homo sapiens]
Length = 579
Score = 64.3 bits (155), Expect = 2e-10
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 22 VQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNG 81
VQP + PPPP + P+T+ Y + +T TQ QS+ +P T N
Sbjct: 124 VQPRPLVVNPPPPPQ-FQNVWRNPNTETYL----QPQITPNPVTQH--VQSAANPETPNS 176
Query: 82 SLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVE 141
+++ E Q+ + +Q E K P + V I R + ++ FG++G + +V+
Sbjct: 177 TISREASTQSSSAAA-SQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVK 235
Query: 142 IIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATARVMTNKKMVTP 198
II N G SKG+GFV+F N D +K+ G+ + G+K+++ A + + V P
Sbjct: 236 IITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRKQKLCARHVQP 291
Score = 57.0 bits (136), Expect = 3e-08
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 72 SSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMF 131
S+ +P T N +++ E Q+ + +Q E K P + V I R + ++ F
Sbjct: 2 SAANPETPNSTISREASTQSSSAAA-SQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF 60
Query: 132 GQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVV--EGRKIEVNNATAR 188
G++G + +V+II N G SKG+GFV+F N D +K+ G+ + G+K+++ A +
Sbjct: 61 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDV----QKIVGSQIHFHGKKLKLGPAIRK 116
Query: 189 VMTNKKMVTP 198
+ V P
Sbjct: 117 QKLCARHVQP 126
>gi|221139802 RNA binding motif protein 24 isoform 1 [Homo sapiens]
Length = 236
Score = 62.0 bits (149), Expect = 8e-10
Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 31/241 (12%)
Query: 104 SESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNER--GSKGFGFVTFENSA 161
++ +T ++ V +P+ D LR+ F FG+I + +I + + S+G+GFVT + A
Sbjct: 4 TQKDTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRA 63
Query: 162 DADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTP-YANG-WKLSP-VVGAVYG-PEL 217
A+RA K +++GRK VN A + +++ P +A G +L P ++ +G P
Sbjct: 64 AAERAC-KDPNPIIDGRKANVN--LAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIPAH 120
Query: 218 YAASSFQADVSLGNDAAVPLSGRGGINTYIPLIIPGFPYPTAATTAAAFRGAHLRGRGRT 277
Y + P + YI + +AA AAA A+
Sbjct: 121 YVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAY------- 173
Query: 278 VYGAVRAVPPTAIPAYPGVVYQDGFYGADLYGGYAAYR---YAQPATATAATAAAAAAAA 334
P A PA G V G+ GYA + A P TA AA AAAAAAAA
Sbjct: 174 -----DQYPYAASPAAAGYVTAGGY-------GYAVQQPITAAAPGTAAAAAAAAAAAAA 221
Query: 335 Y 335
+
Sbjct: 222 F 222
>gi|62244004 modulator of estrogen induced transcription isoform b
[Homo sapiens]
Length = 1016
Score = 60.1 bits (144), Expect = 3e-09
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 64 STQAHGEQSSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFR 123
ST A G+ S+S +++ +++ + T S+ S ST K + VS + +
Sbjct: 326 STGASGQAKSSSKESKDSKTSSKD------DKGSTSSTSGSSGSST-KNIWVSGLSSNTK 378
Query: 124 DPDLRQMFGQFGKILDVEIIFNER--GSKGFGFVTFENSADADRAREKLHGTVVEGRKIE 181
DL+ +FG++GK+L +++ N R G+K +G VT +S + R LH T + G+ I
Sbjct: 379 AADLKNLFGKYGKVLSAKVVTNARSPGAKCYGIVTMSSSTEVSRCIAHLHRTELHGQLIS 438
Query: 182 V 182
V
Sbjct: 439 V 439
>gi|63176611 modulator of estrogen induced transcription isoform a
[Homo sapiens]
Length = 1034
Score = 60.1 bits (144), Expect = 3e-09
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 64 STQAHGEQSSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFR 123
ST A G+ S+S +++ +++ + T S+ S ST K + VS + +
Sbjct: 344 STGASGQAKSSSKESKDSKTSSKD------DKGSTSSTSGSSGSST-KNIWVSGLSSNTK 396
Query: 124 DPDLRQMFGQFGKILDVEIIFNER--GSKGFGFVTFENSADADRAREKLHGTVVEGRKIE 181
DL+ +FG++GK+L +++ N R G+K +G VT +S + R LH T + G+ I
Sbjct: 397 AADLKNLFGKYGKVLSAKVVTNARSPGAKCYGIVTMSSSTEVSRCIAHLHRTELHGQLIS 456
Query: 182 V 182
V
Sbjct: 457 V 457
>gi|4757926 RNA binding motif protein 39 isoform b [Homo sapiens]
Length = 524
Score = 59.7 bits (143), Expect = 4e-09
Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 89 AQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN-ER 147
+Q + ++ ++ + + P RL+V ++ F + LR +F FG+I ++++ + E
Sbjct: 228 SQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSET 287
Query: 148 G-SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATAR 188
G SKG+GF+TF +S A +A E+L+G + GR ++V + T R
Sbjct: 288 GRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTER 329
>gi|35493811 RNA binding motif protein 39 isoform a [Homo sapiens]
Length = 530
Score = 59.7 bits (143), Expect = 4e-09
Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 89 AQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN-ER 147
+Q + ++ ++ + + P RL+V ++ F + LR +F FG+I ++++ + E
Sbjct: 228 SQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSET 287
Query: 148 G-SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATAR 188
G SKG+GF+TF +S A +A E+L+G + GR ++V + T R
Sbjct: 288 GRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTER 329
>gi|37574731 boule isoform 1 [Homo sapiens]
Length = 295
Score = 59.3 bits (142), Expect = 5e-09
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 19/150 (12%)
Query: 83 LTTEGGAQTDGQQSQTQSSENSESKST----------------PKRLHVSNIPFRFRDPD 126
+ TE G QT Q S + S P R+ V I F+ + D
Sbjct: 1 METESGPQTSNQMQTDSLSPSPNPVSPVPLNNPTSAPRYGTVIPNRIFVGGIDFKTNESD 60
Query: 127 LRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 185
LR+ F Q+G + +V+I+ + G SKG+GFVTFE DA + ++ + +K+ + A
Sbjct: 61 LRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKLNIGPA 120
Query: 186 TAR--VMTNKKMVTPYANGWKLSPVVGAVY 213
+ V + + P A L+ G Y
Sbjct: 121 IRKQQVGIPRSSIMPAAGTMYLTTSTGYPY 150
>gi|45238849 poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
Length = 631
Score = 59.3 bits (142), Expect = 5e-09
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 95 QSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFG 153
+ + ++ + +K P +++ N D L+ +FG+FG L V+++ +E G SKGFG
Sbjct: 176 RKEREAELGARAKEFPN-VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFG 234
Query: 154 FVTFENSADADRAREKLHGTVVEGRKIEVNNATARV 189
FV+FE DA +A ++++G + G++I V A +V
Sbjct: 235 FVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Score = 55.8 bits (133), Expect = 6e-08
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 107 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRA 166
KS + V N+ + L FG IL ++ +E GSKG+GFV FE A+RA
Sbjct: 95 KSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERA 154
Query: 167 REKLHGTVVEGRKIEVNNATAR 188
+K++G ++ GRK+ V +R
Sbjct: 155 IKKMNGMLLNGRKVFVGQFKSR 176
Score = 47.8 bits (112), Expect = 2e-05
Identities = 26/93 (27%), Positives = 49/93 (52%)
Query: 90 QTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS 149
QT+ +++ Q ++ ++ L+V N+ D LR+ F FG I +++ S
Sbjct: 273 QTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRS 332
Query: 150 KGFGFVTFENSADADRAREKLHGTVVEGRKIEV 182
KGFGFV F + +A +A +++G +V + + V
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
>gi|208431836 poly A binding protein, cytoplasmic 4 isoform 3 [Homo
sapiens]
Length = 631
Score = 58.9 bits (141), Expect = 7e-09
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 113 LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLH 171
+++ N D L+++F QFGK L V+++ + G SKGFGFV++E DA++A E+++
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMN 252
Query: 172 GTVVEGRKIEVNNATARV 189
G + G+ I V A +V
Sbjct: 253 GKEISGKIIFVGRAQKKV 270
Score = 54.7 bits (130), Expect = 1e-07
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 107 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRA 166
KS + + N+ + L F FG IL +++ +E GSKG+ FV FE AD+A
Sbjct: 95 KSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKA 154
Query: 167 REKLHGTVVEGRKIEVNNATAR 188
EK++G ++ RK+ V +R
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSR 176
Score = 48.1 bits (113), Expect = 1e-05
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 90 QTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS 149
Q + ++ Q + S+ L++ N+ D LR+ F FG I +++ + S
Sbjct: 273 QAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 150 KGFGFVTFENSADADRAREKLHGTVVEGRKIEV 182
KGFGFV F + +A +A +++G +V + + V
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYV 365
Score = 37.4 bits (85), Expect = 0.022
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 103 NSESKSTPKR-LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN--ERGSKGFGFVTFEN 159
N+ + S P L+V ++ + L + F G +L + + + R S G+ +V F+
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 160 SADADRAREKLHGTVVEGRKIEV 182
ADA+RA + ++ V++G+ I +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRI 84
>gi|4504715 poly A binding protein, cytoplasmic 4 isoform 2 [Homo
sapiens]
Length = 644
Score = 58.9 bits (141), Expect = 7e-09
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 113 LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLH 171
+++ N D L+++F QFGK L V+++ + G SKGFGFV++E DA++A E+++
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMN 252
Query: 172 GTVVEGRKIEVNNATARV 189
G + G+ I V A +V
Sbjct: 253 GKEISGKIIFVGRAQKKV 270
Score = 54.7 bits (130), Expect = 1e-07
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 107 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRA 166
KS + + N+ + L F FG IL +++ +E GSKG+ FV FE AD+A
Sbjct: 95 KSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKA 154
Query: 167 REKLHGTVVEGRKIEVNNATAR 188
EK++G ++ RK+ V +R
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSR 176
Score = 48.1 bits (113), Expect = 1e-05
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 90 QTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS 149
Q + ++ Q + S+ L++ N+ D LR+ F FG I +++ + S
Sbjct: 273 QAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 150 KGFGFVTFENSADADRAREKLHGTVVEGRKIEV 182
KGFGFV F + +A +A +++G +V + + V
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYV 365
Score = 37.4 bits (85), Expect = 0.022
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 103 NSESKSTPKR-LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN--ERGSKGFGFVTFEN 159
N+ + S P L+V ++ + L + F G +L + + + R S G+ +V F+
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 160 SADADRAREKLHGTVVEGRKIEV 182
ADA+RA + ++ V++G+ I +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRI 84
>gi|208431833 poly A binding protein, cytoplasmic 4 isoform 1 [Homo
sapiens]
Length = 660
Score = 58.9 bits (141), Expect = 7e-09
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 113 LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLH 171
+++ N D L+++F QFGK L V+++ + G SKGFGFV++E DA++A E+++
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMN 252
Query: 172 GTVVEGRKIEVNNATARV 189
G + G+ I V A +V
Sbjct: 253 GKEISGKIIFVGRAQKKV 270
Score = 54.7 bits (130), Expect = 1e-07
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 107 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRA 166
KS + + N+ + L F FG IL +++ +E GSKG+ FV FE AD+A
Sbjct: 95 KSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKA 154
Query: 167 REKLHGTVVEGRKIEVNNATAR 188
EK++G ++ RK+ V +R
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSR 176
Score = 48.1 bits (113), Expect = 1e-05
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 90 QTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS 149
Q + ++ Q + S+ L++ N+ D LR+ F FG I +++ + S
Sbjct: 273 QAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRS 332
Query: 150 KGFGFVTFENSADADRAREKLHGTVVEGRKIEV 182
KGFGFV F + +A +A +++G +V + + V
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYV 365
Score = 37.4 bits (85), Expect = 0.022
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 103 NSESKSTPKR-LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN--ERGSKGFGFVTFEN 159
N+ + S P L+V ++ + L + F G +L + + + R S G+ +V F+
Sbjct: 2 NAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 160 SADADRAREKLHGTVVEGRKIEV 182
ADA+RA + ++ V++G+ I +
Sbjct: 62 PADAERALDTMNFDVIKGKPIRI 84
>gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]
Length = 378
Score = 58.5 bits (140), Expect = 9e-09
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 34/212 (16%)
Query: 69 GEQSSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLR 128
G P T G + E +G Q +S +NS+S ++ V IP + +LR
Sbjct: 77 GRNIDPKPCTPRG-MQPERTRPKEGWQKGPRS-DNSKSN----KIFVGGIPHNCGETELR 130
Query: 129 QMFGQFGKILDVEIIFN--ERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 186
+ F +FG + +V +I++ ++ +GFGF+TFE+ D+A +H + G+K+EV A
Sbjct: 131 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA-VNMHFHDIMGKKVEVKRAE 189
Query: 187 ARVMTNK------------KMVTPYANGW--KLSPVVGAVYGPELYAASSFQADVSLGND 232
R ++ ++V ANGW + P YGP+ + QA G
Sbjct: 190 PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYG-- 247
Query: 233 AAVPLSGRGG------INTYIPLIIP-GFPYP 257
P +GRG +YI P GFP P
Sbjct: 248 --PPPAGRGAPPPPPPFTSYIVSTPPGGFPPP 277
>gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]
Length = 407
Score = 58.5 bits (140), Expect = 9e-09
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 34/212 (16%)
Query: 69 GEQSSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLR 128
G P T G + E +G Q +S +NS+S ++ V IP + +LR
Sbjct: 77 GRNIDPKPCTPRG-MQPERTRPKEGWQKGPRS-DNSKSN----KIFVGGIPHNCGETELR 130
Query: 129 QMFGQFGKILDVEIIFN--ERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 186
+ F +FG + +V +I++ ++ +GFGF+TFE+ D+A +H + G+K+EV A
Sbjct: 131 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA-VNMHFHDIMGKKVEVKRAE 189
Query: 187 ARVMTNK------------KMVTPYANGW--KLSPVVGAVYGPELYAASSFQADVSLGND 232
R ++ ++V ANGW + P YGP+ + QA G
Sbjct: 190 PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYG-- 247
Query: 233 AAVPLSGRGG------INTYIPLIIP-GFPYP 257
P +GRG +YI P GFP P
Sbjct: 248 --PPPAGRGAPPPPPPFTSYIVSTPPGGFPPP 277
Score = 32.0 bits (71), Expect = 0.93
Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 7/86 (8%)
Query: 10 GNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQ-DYA-GQTGEHNLTLYGSTQA 67
G P TP A + FPPPP P P Q D+ GQ + L G Q
Sbjct: 308 GVPPPPATPGA-----APLAFPPPPSQAAPDMSKPPTAQPDFPYGQYAGYGQDLSGFGQG 362
Query: 68 HGEQSSNSPSTQNGSLTTEGGAQTDG 93
+ S PS S+ GG G
Sbjct: 363 FSDPSQQPPSYGGPSVPGSGGPPAGG 388
>gi|46367787 poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
Length = 636
Score = 58.5 bits (140), Expect = 9e-09
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 113 LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLH 171
+++ N D L+ +FG+FG L V+++ +E G SKGFGFV+FE DA +A ++++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 172 GTVVEGRKIEVNNATARV 189
G + G++I V A +V
Sbjct: 253 GKELNGKQIYVGRAQKKV 270
Score = 57.0 bits (136), Expect = 3e-08
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 107 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRA 166
KS + + N+ + L F FG IL +++ +E GSKG+GFV FE A+RA
Sbjct: 95 KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERA 154
Query: 167 REKLHGTVVEGRKIEVNNATAR 188
EK++G ++ RK+ V +R
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSR 176
Score = 47.0 bits (110), Expect = 3e-05
Identities = 26/93 (27%), Positives = 48/93 (51%)
Query: 90 QTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS 149
QT+ ++ Q ++ ++ L+V N+ D LR+ F FG I +++ S
Sbjct: 273 QTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRS 332
Query: 150 KGFGFVTFENSADADRAREKLHGTVVEGRKIEV 182
KGFGFV F + +A +A +++G +V + + V
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Score = 35.8 bits (81), Expect = 0.065
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 113 LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN--ERGSKGFGFVTFENSADADRAREKL 170
L+V ++ + L + F G IL + + + R S G+ +V F+ ADA+RA + +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 171 HGTVVEGRKIEV 182
+ V++G+ + +
Sbjct: 73 NFDVIKGKPVRI 84
>gi|14719414 boule isoform 2 [Homo sapiens]
Length = 283
Score = 58.2 bits (139), Expect = 1e-08
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 110 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 168
P R+ V I F+ + DLR+ F Q+G + +V+I+ + G SKG+GFVTFE DA + +
Sbjct: 32 PNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQ 91
Query: 169 KLHGTVVEGRKIEVNNATAR--VMTNKKMVTPYANGWKLSPVVGAVY 213
+ + +K+ + A + V + + P A L+ G Y
Sbjct: 92 EAEKLNYKDKKLNIGPAIRKQQVGIPRSSIMPAAGTMYLTTSTGYPY 138
>gi|4759098 splicing factor, arginine/serine-rich 10 [Homo sapiens]
Length = 288
Score = 58.2 bits (139), Expect = 1e-08
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 16/97 (16%)
Query: 103 NSESKSTPKRLHVSN--------------IPFRFRDPDLRQMFGQFGKILDVEIIFNE-- 146
+S S + +R HV N + + DLR++F ++G I DV I++++
Sbjct: 96 HSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQS 155
Query: 147 RGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVN 183
R S+GF FV FEN DA A+E+ +G ++GR+I V+
Sbjct: 156 RRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 192
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,705,276
Number of Sequences: 37866
Number of extensions: 784142
Number of successful extensions: 4649
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 225
Number of HSP's that attempted gapping in prelim test: 3516
Number of HSP's gapped (non-prelim): 938
length of query: 376
length of database: 18,247,518
effective HSP length: 104
effective length of query: 272
effective length of database: 14,309,454
effective search space: 3892171488
effective search space used: 3892171488
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.