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Search of human proteins with 13376671
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13376671 DBF4 homolog B isoform 2 [Homo sapiens]
(170 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13376671 DBF4 homolog B isoform 2 [Homo sapiens] 345 1e-95
gi|22035682 DBF4 homolog B isoform 1 [Homo sapiens] 315 1e-86
gi|5729734 activator of S phase kinase [Homo sapiens] 78 3e-15
gi|162287219 prune homolog 2 [Homo sapiens] 32 0.34
gi|118442841 hypothetical protein LOC123591 [Homo sapiens] 31 0.45
gi|145309324 FH2 domain containing 1 [Homo sapiens] 31 0.59
gi|7657218 bromodomain-containing protein 4 isoform short [Homo ... 30 1.0
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 30 1.0
gi|18079216 CASK interacting protein 1 [Homo sapiens] 29 1.7
gi|239756899 PREDICTED: hypothetical protein [Homo sapiens] 29 1.7
gi|113427491 PREDICTED: hypothetical protein [Homo sapiens] 29 1.7
gi|239745902 PREDICTED: hypothetical protein [Homo sapiens] 29 1.7
gi|239735519 SET binding factor 1 [Homo sapiens] 29 2.2
gi|226442893 jumonji domain containing 2C isoform 3 [Homo sapiens] 29 2.2
gi|239757677 PREDICTED: hypothetical protein [Homo sapiens] 29 2.2
gi|239752167 PREDICTED: hypothetical protein [Homo sapiens] 29 2.2
gi|239746688 PREDICTED: hypothetical protein [Homo sapiens] 29 2.2
gi|226442897 jumonji domain containing 2C isoform 4 [Homo sapiens] 29 2.2
gi|226442889 jumonji domain containing 2C isoform 2 [Homo sapiens] 29 2.2
gi|109255247 jumonji domain containing 2C isoform 1 [Homo sapiens] 29 2.2
gi|50843837 hypothetical protein LOC55701 [Homo sapiens] 29 2.2
gi|148727255 microtubule associated serine/threonine kinase fami... 28 2.9
gi|153792110 HEG homolog 1 [Homo sapiens] 28 2.9
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho... 28 2.9
gi|41872583 Rho-associated, coiled-coil containing protein kinas... 28 3.8
gi|239755232 PREDICTED: hypothetical protein [Homo sapiens] 28 3.8
gi|157739942 gemin 5 [Homo sapiens] 28 3.8
gi|55956916 myosin IE [Homo sapiens] 28 3.8
gi|61743942 abl-interactor 1 isoform a [Homo sapiens] 28 5.0
gi|47132529 suppression of tumorigenicity 5 isoform 1 [Homo sapi... 28 5.0
>gi|13376671 DBF4 homolog B isoform 2 [Homo sapiens]
Length = 170
Score = 345 bits (885), Expect = 1e-95
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 1 MSEPGKGDDCLELESSMAESRLRAPDLGVSRCLGKCQKNSPGARKHPFSGKSFYLDLPAG 60
MSEPGKGDDCLELESSMAESRLRAPDLGVSRCLGKCQKNSPGARKHPFSGKSFYLDLPAG
Sbjct: 1 MSEPGKGDDCLELESSMAESRLRAPDLGVSRCLGKCQKNSPGARKHPFSGKSFYLDLPAG 60
Query: 61 KNLQFLTGAIQQLGGVIEGFLSKEVSYIVSSRREVKAESSGKSHRGCPSPSPSEVRVETS 120
KNLQFLTGAIQQLGGVIEGFLSKEVSYIVSSRREVKAESSGKSHRGCPSPSPSEVRVETS
Sbjct: 61 KNLQFLTGAIQQLGGVIEGFLSKEVSYIVSSRREVKAESSGKSHRGCPSPSPSEVRVETS 120
Query: 121 AMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAIRNQVSWGKMGQSRWSPA 170
AMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAIRNQVSWGKMGQSRWSPA
Sbjct: 121 AMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAIRNQVSWGKMGQSRWSPA 170
>gi|22035682 DBF4 homolog B isoform 1 [Homo sapiens]
Length = 615
Score = 315 bits (807), Expect = 1e-86
Identities = 160/167 (95%), Positives = 161/167 (96%), Gaps = 2/167 (1%)
Query: 1 MSEPGKGDDCLELESSMAESRLRAPDLGVSRCLGKCQKNSPGARKHPFSGKSFYLDLPAG 60
MSEPGKGDDCLELESSMAESRLRAPDLGVSRCLGKCQKNSPGARKHPFSGKSFYLDLPAG
Sbjct: 1 MSEPGKGDDCLELESSMAESRLRAPDLGVSRCLGKCQKNSPGARKHPFSGKSFYLDLPAG 60
Query: 61 KNLQFLTGAIQQLGGVIEGFLSKEVSYIVSSRREVKAESSGKSHRGCPSPSPSEVRVETS 120
KNLQFLTGAIQQLGGVIEGFLSKEVSYIVSSRREVKAESSGKSHRGCPSPSPSEVRVETS
Sbjct: 61 KNLQFLTGAIQQLGGVIEGFLSKEVSYIVSSRREVKAESSGKSHRGCPSPSPSEVRVETS 120
Query: 121 AMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAIRNQ--VSWGKMGQS 165
AMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAIRNQ +S G G S
Sbjct: 121 AMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAIRNQGSISGGGSGGS 167
>gi|5729734 activator of S phase kinase [Homo sapiens]
Length = 674
Score = 78.2 bits (191), Expect = 3e-15
Identities = 51/127 (40%), Positives = 71/127 (55%), Gaps = 18/127 (14%)
Query: 47 PFSGKSFYLDLPAGKNLQFLTGAIQQLGGVIEGFLSKEVSYIVSSRREVK-AESSGKSHR 105
P GK FYLDLP+ + L I+ LGG +E FLSK++SY++S+++E K A++ G+
Sbjct: 45 PLWGKVFYLDLPSVTISEKLQKDIKDLGGRVEEFLSKDISYLISNKKEAKFAQTLGRI-- 102
Query: 106 GCPSPSPSEVRVETSAMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAIR----------- 154
SP PS T+ P SH S K D+V LSRGK L++KAI+
Sbjct: 103 ---SPVPSPESAYTAETTSPHPSHDGSSFKSPDTVCLSRGKLLVEKAIKDHDFIPSNSIL 159
Query: 155 -NQVSWG 160
N +SWG
Sbjct: 160 SNALSWG 166
>gi|162287219 prune homolog 2 [Homo sapiens]
Length = 3088
Score = 31.6 bits (70), Expect = 0.34
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 89 VSSRREVKAESSGKSHRGCPSPSPSEVRVETSAMVDPKGSHP--RPSRKPVD 138
+ + ++K S SH+G P PS T V KG+ P P +PVD
Sbjct: 2171 IGYQADIKGSSQPASHKGSPEPSEINGDNSTGLQVSEKGASPDMAPILEPVD 2222
>gi|118442841 hypothetical protein LOC123591 [Homo sapiens]
Length = 531
Score = 31.2 bits (69), Expect = 0.45
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 90 SSRREVKAESSGKSHRGCPSPSPSEVRVETSAMVDPKGS---HPRPSRKPVDSVPLSR 144
S+ RE + G S P P PS+ +VE + + D S P PS+K +D PL+R
Sbjct: 412 STAREEPSSEPGPS----PPPLPSQQQVEEATVQDLLSSLSEDPCPSQKALDPAPLAR 465
>gi|145309324 FH2 domain containing 1 [Homo sapiens]
Length = 1143
Score = 30.8 bits (68), Expect = 0.59
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 90 SSRREVKAESSGKSHRGCP--SPSPSEVRVETSAMVDPKGSHPRPSRKPVDSVPLSRGKE 147
S + V+ S+G + P S S R + P+GS +PS KP+ ++P + +E
Sbjct: 940 SRQNSVRRASTGAEEQRLPRGSSGSSSTRPGRDVPLQPRGSFKKPSAKPLRNLPRQKPEE 999
>gi|7657218 bromodomain-containing protein 4 isoform short [Homo
sapiens]
Length = 722
Score = 30.0 bits (66), Expect = 1.0
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 94 EVKAESSGKSHRGCPSPSPSEVRVETSAMVDPKGSHPRPSRKPVDSVP 141
+ K G+ G P S V T A P+ P+P+ PV + P
Sbjct: 175 QAKGRGRGRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATP 222
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 30.0 bits (66), Expect = 1.0
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 94 EVKAESSGKSHRGCPSPSPSEVRVETSAMVDPKGSHPRPSRKPVDSVP 141
+ K G+ G P S V T A P+ P+P+ PV + P
Sbjct: 175 QAKGRGRGRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATP 222
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 29.3 bits (64), Expect = 1.7
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 93 REVKAESSGKSHRGCPSPSPSEVRVETSAMVDPKGSHP----RPSRKPVDSVP 141
+ VKA + S PSP+PS R +A+ P G+ P P++ P P
Sbjct: 1282 KPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSPGAP 1334
>gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 29.3 bits (64), Expect = 1.7
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 110 PSPSEVRVETSAMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAIRNQVSWGKMGQSRWSP 169
P P+ VR T + + H RP +P+ VPL+R EL A + G G + P
Sbjct: 14 PDPNSVR--TVPQPETRLDHNRPMSRPIFPVPLARRTELPGAAPAGEPRRGDPGVAPSPP 71
Query: 170 A 170
A
Sbjct: 72 A 72
>gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 29.3 bits (64), Expect = 1.7
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 110 PSPSEVRVETSAMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAIRNQVSWGKMGQSRWSP 169
P P+ VR T + + H RP +P+ VPL+R EL A + G G + P
Sbjct: 14 PDPNSVR--TVPQPETRLDHNRPMSRPIFPVPLARRTELPGAAPAGEPRRGDPGVAPSPP 71
Query: 170 A 170
A
Sbjct: 72 A 72
>gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 29.3 bits (64), Expect = 1.7
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 110 PSPSEVRVETSAMVDPKGSHPRPSRKPVDSVPLSRGKELLQKAIRNQVSWGKMGQSRWSP 169
P P+ VR T + + H RP +P+ VPL+R EL A + G G + P
Sbjct: 14 PDPNSVR--TVPQPETRLDHNRPMSRPIFPVPLARRTELPGAAPAGEPRRGDPGVAPSPP 71
Query: 170 A 170
A
Sbjct: 72 A 72
>gi|239735519 SET binding factor 1 [Homo sapiens]
Length = 1893
Score = 28.9 bits (63), Expect = 2.2
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 104 HRGCPSPSPSEVRVETSAMVDPKGSHPRPSRKPVDSVPLS 143
HRG P P E + S ++P P + KP D + +S
Sbjct: 1080 HRGQPPPEDQEDEISVSEELEPSTLTPSSALKPSDRMTMS 1119
>gi|226442893 jumonji domain containing 2C isoform 3 [Homo sapiens]
Length = 813
Score = 28.9 bits (63), Expect = 2.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 128 SHPRPSRKPVDSVPLSRGKELLQKAIRNQVSWGKMGQS 165
S P S + DS+PLS G E +K+ +++SW K +S
Sbjct: 476 SVPSISSEADDSIPLSSGYEKPEKSDPSELSWPKSPES 513
>gi|239757677 PREDICTED: hypothetical protein [Homo sapiens]
Length = 152
Score = 28.9 bits (63), Expect = 2.2
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 96 KAESSGKSHRGCPSPSPSEVR---VETSAMVDPKGSHPR---PSRKPVDSVPLS 143
+ +SG SHR P+P PS V+ + A G HP PSR+ +P++
Sbjct: 46 RTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGGLPVA 99
>gi|239752167 PREDICTED: hypothetical protein [Homo sapiens]
Length = 152
Score = 28.9 bits (63), Expect = 2.2
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 96 KAESSGKSHRGCPSPSPSEVR---VETSAMVDPKGSHPR---PSRKPVDSVPLS 143
+ +SG SHR P+P PS V+ + A G HP PSR+ +P++
Sbjct: 46 RTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGGLPVA 99
>gi|239746688 PREDICTED: hypothetical protein [Homo sapiens]
Length = 152
Score = 28.9 bits (63), Expect = 2.2
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 96 KAESSGKSHRGCPSPSPSEVR---VETSAMVDPKGSHPR---PSRKPVDSVPLS 143
+ +SG SHR P+P PS V+ + A G HP PSR+ +P++
Sbjct: 46 RTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPSRQTWGGLPVA 99
>gi|226442897 jumonji domain containing 2C isoform 4 [Homo sapiens]
Length = 835
Score = 28.9 bits (63), Expect = 2.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 128 SHPRPSRKPVDSVPLSRGKELLQKAIRNQVSWGKMGQS 165
S P S + DS+PLS G E +K+ +++SW K +S
Sbjct: 498 SVPSISSEADDSIPLSSGYEKPEKSDPSELSWPKSPES 535
>gi|226442889 jumonji domain containing 2C isoform 2 [Homo sapiens]
Length = 1047
Score = 28.9 bits (63), Expect = 2.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 128 SHPRPSRKPVDSVPLSRGKELLQKAIRNQVSWGKMGQS 165
S P S + DS+PLS G E +K+ +++SW K +S
Sbjct: 476 SVPSISSEADDSIPLSSGYEKPEKSDPSELSWPKSPES 513
>gi|109255247 jumonji domain containing 2C isoform 1 [Homo sapiens]
Length = 1056
Score = 28.9 bits (63), Expect = 2.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 128 SHPRPSRKPVDSVPLSRGKELLQKAIRNQVSWGKMGQS 165
S P S + DS+PLS G E +K+ +++SW K +S
Sbjct: 476 SVPSISSEADDSIPLSSGYEKPEKSDPSELSWPKSPES 513
>gi|50843837 hypothetical protein LOC55701 [Homo sapiens]
Length = 1519
Score = 28.9 bits (63), Expect = 2.2
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Query: 71 QQLGGVIEGFLSKEVSYIVSSRREVKAESSGKSHRGCPSPSPSEVRVETSAMVDPKGSHP 130
Q+L I+ + +E S RR SSG + G SPSPS S+++ P P
Sbjct: 946 QELERRIQQHVGEEASPRGYRRRRADGASSGGAQWGPRSPSPS-----LSSLLLPSSPGP 1000
Query: 131 RPSRKPVDSVPLSRGKE 147
RP+ P E
Sbjct: 1001 RPAPSHCSLAPCGEDYE 1017
>gi|148727255 microtubule associated serine/threonine kinase family
member 4 isoform a [Homo sapiens]
Length = 2434
Score = 28.5 bits (62), Expect = 2.9
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 16/80 (20%)
Query: 93 REVKAESSGKSHRGCPSPSPSEVRVETSAMVDPKGSHP---RPSRKPVDSVPLSRGKELL 149
+ V A S SH+ P P P PK HP S+KP SV ++GKE
Sbjct: 1992 KPVAAHSESSSHKPRPGPDPG----------PPKTKHPDRSLSSQKP--SVGATKGKEPA 2039
Query: 150 QKAIRNQVSWGKMGQSRWSP 169
+++ GK G S+ P
Sbjct: 2040 TQSLGGSSREGK-GHSKSGP 2058
>gi|153792110 HEG homolog 1 [Homo sapiens]
Length = 1381
Score = 28.5 bits (62), Expect = 2.9
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 89 VSSRREVKAESSGKSHRGCPSPSPSEVRVETSAMVDPKGSHPRPSRKPVDSVPLSRGKEL 148
VSS+ V ++SGKSH +P + ET+ D +G SR +P+ E+
Sbjct: 136 VSSKEGVMVQTSGKSHAASDAPENLTLLAETA---DARGRSGSSSRTNFTILPVGYSLEI 192
>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
sapiens]
Length = 3549
Score = 28.5 bits (62), Expect = 2.9
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Query: 91 SRREVKAESSGKSHRGCPSPSP---SEVRVETSAMVDPKGSHPRPSRKPV----DSVPLS 143
S ++KAE +S G P P P + E+S+M P P PS+KP S P
Sbjct: 2330 STEKIKAEF--ESFPGLPLPPPPVDEKSERESSSMFLPPPPPPTPSQKPAHLLSSSAPEK 2387
Query: 144 RGKELLQKAIRNQVSWGKMGQSR 166
+ +Q+ + + S + Q++
Sbjct: 2388 HSGDFMQQYSQKEASNSQNSQAK 2410
>gi|41872583 Rho-associated, coiled-coil containing protein kinase 2
[Homo sapiens]
Length = 1388
Score = 28.1 bits (61), Expect = 3.8
Identities = 29/118 (24%), Positives = 44/118 (37%), Gaps = 20/118 (16%)
Query: 25 PDLGVSRCLGKCQKNSPGARKHPFSGKSFYLDLPAGKNLQFLTGAIQQLGGVIEGFLSKE 84
P L RC KC K+ ++ + Y D+ KNL L + ++ K
Sbjct: 1289 PALECRRCHIKCHKDHMDKKEEIIAPCKVYYDISTAKNLLLLANSTEE--------QQKW 1340
Query: 85 VSYIVSSRREVKAESSGKSHRGCPSPSP-SEVRVETSAMVDPKGSHPRPSRKPVDSVP 141
VS +V K + P+P P + TS + S RPSR+ + P
Sbjct: 1341 VSRLVK-----------KIPKKPPAPDPFARSSPRTSMKIQQNQSIRRPSRQLAPNKP 1387
>gi|239755232 PREDICTED: hypothetical protein [Homo sapiens]
Length = 501
Score = 28.1 bits (61), Expect = 3.8
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 110 PSPSEVRVETSAMVDPKGSHPRPSRKPVD-SVPLSR 144
PSP + A+VD K H + +KP S+P SR
Sbjct: 216 PSPETTDPQDGALVDQKPHHGKKKKKPASLSLPFSR 251
>gi|157739942 gemin 5 [Homo sapiens]
Length = 1508
Score = 28.1 bits (61), Expect = 3.8
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 88 IVSSRREVKAESSGKSHRGCPSPSPSEVRVETSAMVDPKGSHPRPSRKPVDSVPLSRGKE 147
I + E E+SG G E E P G P SR+PV P+S G E
Sbjct: 758 IDGNEEESMKENSGPVENGVSDQEGEEQAREPEL---PCGLAPAVSREPVICTPVSSGFE 814
Query: 148 LLQKAIRNQV 157
+ I N+V
Sbjct: 815 KSKVTINNKV 824
>gi|55956916 myosin IE [Homo sapiens]
Length = 1108
Score = 28.1 bits (61), Expect = 3.8
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 108 PSPSPSEVRVETSAMVDPKGSHPRPSRKPVDSVP 141
P + VR +T++ P G P+P KP VP
Sbjct: 1021 PDQGAAGVRRQTTSRPPPAGGRPKPQPKPKPQVP 1054
>gi|61743942 abl-interactor 1 isoform a [Homo sapiens]
Length = 508
Score = 27.7 bits (60), Expect = 5.0
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 98 ESSGKSHRGCP----SPSPSEVRVETSAMVDPKGSHPRPSRKPV 137
E+SG S G P +PSP + E ++ P G+ P P P+
Sbjct: 250 ENSGSSSIGIPIAVPTPSPPTIGPENISVPPPSGAPPAPPLAPL 293
>gi|47132529 suppression of tumorigenicity 5 isoform 1 [Homo
sapiens]
Length = 1137
Score = 27.7 bits (60), Expect = 5.0
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 98 ESSGKSHRGCPSPSPSEVRVETSAMVDPK-GSHPRPSR 134
E SG + G P SPS R+ + + +DP P+P R
Sbjct: 355 EGSGSTKPGTPGNSPSSQRLPSKSSLDPAVNPVPKPKR 392
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,479,904
Number of Sequences: 37866
Number of extensions: 360163
Number of successful extensions: 1072
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1028
Number of HSP's gapped (non-prelim): 64
length of query: 170
length of database: 18,247,518
effective HSP length: 95
effective length of query: 75
effective length of database: 14,650,248
effective search space: 1098768600
effective search space used: 1098768600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.