KDM4C 15382

Name: KDM4C	Sequence: fasta or formatted (835aa)		NCBI GI: 226442897
Description: jumonji domain containing 2C isoform 4		Referenced in: Histones, Related Proteins, and Modifying Enzymes PHD Finger Proteins
Other entries for this name: alt prot [1056aa] jumonji domain containing 2C isoform 1 alt prot [1047aa] jumonji domain containing 2C isoform 2 alt prot [813aa] jumonji domain containing 2C isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 59 3 C cysteine 3.0 25 2 D aspartate 4.9 41 2 E glutamate 9.9 83 4 F phenylalanine 3.1 26 2 G glycine 5.0 42 2 H histidine 2.2 18 1 I isoleucine 5.0 42 1 K lysine 7.2 60 2 L leucine 6.6 55 2 M methionine 2.3 19 1 N asparagine 4.0 33 2 P proline 6.6 55 2 Q glutamine 2.9 24 2 R arginine 4.9 41 3 S serine 8.7 73 3 T threonine 5.4 45 2 V valine 5.5 46 2 W tryptophan 2.2 18 1 Y tyrosine 3.6 30 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 jumonji domain containing 2C isoform 4 KDM4C 0.974 jumonji domain containing 2C isoform 3 KDM4C 0.968 jumonji domain containing 2C isoform 2 KDM4C 0.968 jumonji domain containing 2C isoform 1 KDM4B 0.498 jumonji domain containing 2B KDM4A 0.495 jumonji domain containing 2A KDM4D 0.291 jumonji domain containing 2D LOC100129053 0.285 PREDICTED: hypothetical protein LOC100129053 0.285 PREDICTED: hypothetical protein LOC100129053 0.285 PREDICTED: hypothetical protein LOC390245 0.284 PREDICTED: hypothetical protein LOC390245 0.284 PREDICTED: hypothetical protein LOC390245 0.284 PREDICTED: hypothetical protein KDM5A 0.070 retinoblastoma binding protein 2 isoform 1 KDM5A 0.070 retinoblastoma binding protein 2 isoform 2 KDM5C 0.066 jumonji, AT rich interactive domain 1C isoform 2 [H... KDM5C 0.066 jumonji, AT rich interactive domain 1C isoform 1 [H... KDM5D 0.065 jumonji, AT rich interactive domain 1D isoform 3 [H... KDM5D 0.065 jumonji, AT rich interactive domain 1D isoform 2 [Ho... KDM5B 0.063 jumonji, AT rich interactive domain 1B LOC100133760 0.063 PREDICTED: similar to Jumonji, AT rich interactive ... KDM5D 0.062 jumonji, AT rich interactive domain 1D isoform 1 [H... BRPF1 0.039 bromodomain and PHD finger-containing protein 1 isof... BRPF1 0.039 bromodomain and PHD finger-containing protein 1 isof... JARID2 0.033 jumonji, AT rich interactive domain 2 protein BRD1 0.031 bromodomain containing protein 1 BRPF3 0.029 bromodomain and PHD finger containing, 3 MLLT10 0.028 myeloid/lymphoid or mixed-lineage leukemia transloca... MLLT10 0.028 myeloid/lymphoid or mixed-lineage leukemia translocat... MLLT6 0.026 myeloid/lymphoid or mixed-lineage leukemia (trithora... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.