KDM4C 15381

Name: KDM4C	Sequence: fasta or formatted (813aa)		NCBI GI: 226442893
Description: jumonji domain containing 2C isoform 3		Referenced in: Histones, Related Proteins, and Modifying Enzymes PHD Finger Proteins
Other entries for this name: alt prot [1056aa] jumonji domain containing 2C isoform 1 alt prot [1047aa] jumonji domain containing 2C isoform 2 alt prot [835aa] jumonji domain containing 2C isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 55 2 C cysteine 3.1 25 2 D aspartate 4.9 40 2 E glutamate 10.0 81 4 F phenylalanine 3.2 26 2 G glycine 5.0 41 2 H histidine 2.1 17 1 I isoleucine 5.0 41 1 K lysine 7.1 58 2 L leucine 6.5 53 2 M methionine 2.2 18 1 N asparagine 4.1 33 2 P proline 6.6 54 2 Q glutamine 3.0 24 2 R arginine 4.9 40 3 S serine 9.0 73 3 T threonine 5.2 42 2 V valine 5.7 46 2 W tryptophan 2.1 17 1 Y tyrosine 3.6 29 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 jumonji domain containing 2C isoform 3 KDM4C 1.000 jumonji domain containing 2C isoform 4 KDM4C 0.994 jumonji domain containing 2C isoform 2 KDM4C 0.994 jumonji domain containing 2C isoform 1 KDM4B 0.511 jumonji domain containing 2B KDM4A 0.508 jumonji domain containing 2A KDM4D 0.299 jumonji domain containing 2D LOC100129053 0.293 PREDICTED: hypothetical protein LOC100129053 0.293 PREDICTED: hypothetical protein LOC100129053 0.293 PREDICTED: hypothetical protein LOC390245 0.292 PREDICTED: hypothetical protein LOC390245 0.292 PREDICTED: hypothetical protein LOC390245 0.292 PREDICTED: hypothetical protein KDM5A 0.072 retinoblastoma binding protein 2 isoform 1 KDM5A 0.072 retinoblastoma binding protein 2 isoform 2 KDM5C 0.068 jumonji, AT rich interactive domain 1C isoform 2 [H... KDM5C 0.068 jumonji, AT rich interactive domain 1C isoform 1 [H... KDM5D 0.066 jumonji, AT rich interactive domain 1D isoform 3 [H... KDM5D 0.066 jumonji, AT rich interactive domain 1D isoform 2 [Ho... KDM5B 0.065 jumonji, AT rich interactive domain 1B LOC100133760 0.065 PREDICTED: similar to Jumonji, AT rich interactive ... KDM5D 0.064 jumonji, AT rich interactive domain 1D isoform 1 [H... BRPF1 0.040 bromodomain and PHD finger-containing protein 1 isof... BRPF1 0.040 bromodomain and PHD finger-containing protein 1 isof... JARID2 0.034 jumonji, AT rich interactive domain 2 protein BRD1 0.032 bromodomain containing protein 1 BRPF3 0.030 bromodomain and PHD finger containing, 3 MLLT10 0.028 myeloid/lymphoid or mixed-lineage leukemia transloca... MLLT10 0.028 myeloid/lymphoid or mixed-lineage leukemia translocat... MLLT6 0.027 myeloid/lymphoid or mixed-lineage leukemia (trithora... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.