Guide to the Human Genome
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Name: FHDC1 Sequence: fasta or formatted (1143aa) NCBI GI: 145309324
Description:

FH2 domain containing 1

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         82           3
 C cysteine            1.5         17           1
 D aspartate           3.9         45           1
 E glutamate           8.0         92           2
 F phenylalanine       3.1         35           2
 G glycine             6.7         77           2
 H histidine           2.1         24           2
 I isoleucine          2.7         31           1
 K lysine              6.5         74           3
 L leucine             9.1        104           2
 M methionine          1.7         20           1
 N asparagine          3.0         34           1
 P proline            10.4        119          10
 Q glutamine           4.3         49           2
 R arginine            7.4         85           2
 S serine             12.1        138           4
 T threonine           5.1         58           2
 V valine              3.8         43           2
 W tryptophan          0.5          6           1
 Y tyrosine            0.9         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FH2 domain containing 1 
INF2                  0.093   inverted formin 2 isoform 2 
INF2                  0.093   inverted formin 2 isoform 1 
DIAPH1                0.076   diaphanous 1 isoform 2 
DIAPH1                0.076   diaphanous 1 isoform 1 
DAAM2                 0.071   dishevelled associated activator of morphogenesis 2 ...
DAAM1                 0.071   dishevelled-associated activator of morphogenesis 1 ...
DIAPH3                0.068   diaphanous homolog 3 isoform b 
DIAPH3                0.067   diaphanous homolog 3 isoform a 
DIAPH2                0.066   diaphanous 2 isoform 156 
DIAPH2                0.065   diaphanous 2 isoform 12C 
FMNL2                 0.063   formin-like 2 
FMNL3                 0.062   formin-like 3 isoform 2 
FMNL3                 0.062   formin-like 3 isoform 1 
FMNL1                 0.057   formin-like 1 
GRID2IP               0.056   glutamate receptor, ionotropic, delta 2 (Grid2) int...
FMN1                  0.056   formin 1 
FMN2                  0.039   formin 2 
FHOD3                 0.036   formin homology 2 domain containing 3 
FHOD1                 0.026   formin homology 2 domain containing 1 
ZFHX4                 0.022   zinc finger homeodomain 4 
LOC645529             0.019   PREDICTED: similar to Putative acrosin-like proteas...
ENAH                  0.019   enabled homolog isoform a 
ENAH                  0.019   enabled homolog isoform b 
SRRM2                 0.019   splicing coactivator subunit SRm300 
SETD1B                0.019   SET domain containing 1B 
WASF2                 0.019   WAS protein family, member 2 
WASL                  0.019   Wiskott-Aldrich syndrome gene-like protein 
ACR                   0.019   acrosin precursor 
PRR12                 0.018   proline rich 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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