Guide to the Human Genome
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Name: DBF4B Sequence: fasta or formatted (170aa) NCBI GI: 13376671
Description:

DBF4 homolog B isoform 2

Referenced in:

Additional Cell Cycle Functions

Other entries for this name:
alt prot [615aa] DBF4 homolog B isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3          9           1
 C cysteine            2.4          4           1
 D aspartate           3.5          6           2
 E glutamate           6.5         11           1
 F phenylalanine       2.4          4           1
 G glycine            10.0         17           2
 H histidine           1.8          3           1
 I isoleucine          2.4          4           1
 K lysine              8.2         14           1
 L leucine             8.2         14           2
 M methionine          2.4          4           1
 N asparagine          1.8          3           1
 P proline             8.2         14           1
 Q glutamine           4.1          7           2
 R arginine            7.6         13           2
 S serine             15.3         26           2
 T threonine           1.2          2           1
 V valine              6.5         11           1
 W tryptophan          1.2          2           1
 Y tyrosine            1.2          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DBF4 homolog B isoform 2 
DBF4B                 0.906   DBF4 homolog B isoform 1 
DBF4                  0.166   activator of S phase kinase 
PRUNE2                0.022   prune homolog 2 
C15orf27              0.019   hypothetical protein LOC123591 
FHDC1                 0.019   FH2 domain containing 1 
BRD4                  0.016   bromodomain-containing protein 4 isoform short 
BRD4                  0.016   bromodomain-containing protein 4 isoform long 
CASKIN1               0.013   CASK interacting protein 1 
LOC729417             0.013   PREDICTED: hypothetical protein 
LOC729417             0.013   PREDICTED: hypothetical protein 
LOC729417             0.013   PREDICTED: hypothetical protein 
SBF1                  0.013   SET binding factor 1 
KDM4C                 0.013   jumonji domain containing 2C isoform 3 
LOC284889             0.013   PREDICTED: hypothetical protein 
LOC284889             0.013   PREDICTED: hypothetical protein 
LOC284889             0.013   PREDICTED: hypothetical protein 
KDM4C                 0.013   jumonji domain containing 2C isoform 4 
KDM4C                 0.013   jumonji domain containing 2C isoform 2 
KDM4C                 0.013   jumonji domain containing 2C isoform 1 
FLJ10357              0.013   hypothetical protein LOC55701 
MAST4                 0.009   microtubule associated serine/threonine kinase fami...
HEG1                  0.009   HEG homolog 1 
XIRP2                 0.009   xin actin-binding repeat containing 2 isoform 1 [Ho...
ROCK2                 0.009   Rho-associated, coiled-coil containing protein kinas...
LOC729575             0.009   PREDICTED: hypothetical protein 
GEMIN5                0.009   gemin 5 
MYO1E                 0.009   myosin IE 
ABI1                  0.009   abl-interactor 1 isoform a 
ST5                   0.009   suppression of tumorigenicity 5 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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