KDM4C 403

Name: KDM4C	Sequence: fasta or formatted (1056aa)		NCBI GI: 109255247
Description: jumonji domain containing 2C isoform 1		Referenced in: Histones, Related Proteins, and Modifying Enzymes PHD Finger Proteins
Other entries for this name: alt prot [1047aa] jumonji domain containing 2C isoform 2 alt prot [813aa] jumonji domain containing 2C isoform 3 alt prot [835aa] jumonji domain containing 2C isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 70 2 C cysteine 3.4 36 2 D aspartate 5.2 55 2 E glutamate 9.0 95 4 F phenylalanine 3.9 41 2 G glycine 4.9 52 2 H histidine 2.2 23 1 I isoleucine 4.8 51 2 K lysine 7.4 78 2 L leucine 5.7 60 2 M methionine 2.3 24 1 N asparagine 3.7 39 2 P proline 6.1 64 2 Q glutamine 3.3 35 2 R arginine 5.6 59 3 S serine 8.6 91 3 T threonine 5.1 54 2 V valine 6.5 69 2 W tryptophan 1.8 19 1 Y tyrosine 3.9 41 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 jumonji domain containing 2C isoform 1 KDM4C 0.948 jumonji domain containing 2C isoform 2 KDM4C 0.762 jumonji domain containing 2C isoform 3 KDM4C 0.762 jumonji domain containing 2C isoform 4 KDM4A 0.535 jumonji domain containing 2A KDM4B 0.515 jumonji domain containing 2B KDM4D 0.229 jumonji domain containing 2D LOC100129053 0.225 PREDICTED: hypothetical protein LOC100129053 0.225 PREDICTED: hypothetical protein LOC100129053 0.225 PREDICTED: hypothetical protein LOC390245 0.224 PREDICTED: hypothetical protein LOC390245 0.224 PREDICTED: hypothetical protein LOC390245 0.224 PREDICTED: hypothetical protein KDM5A 0.055 retinoblastoma binding protein 2 isoform 1 KDM5A 0.055 retinoblastoma binding protein 2 isoform 2 KDM5C 0.052 jumonji, AT rich interactive domain 1C isoform 2 [H... KDM5C 0.052 jumonji, AT rich interactive domain 1C isoform 1 [H... KDM5D 0.051 jumonji, AT rich interactive domain 1D isoform 3 [H... KDM5D 0.051 jumonji, AT rich interactive domain 1D isoform 2 [Ho... KDM5B 0.050 jumonji, AT rich interactive domain 1B LOC100133760 0.050 PREDICTED: similar to Jumonji, AT rich interactive ... KDM5D 0.049 jumonji, AT rich interactive domain 1D isoform 1 [H... BRPF1 0.049 bromodomain and PHD finger-containing protein 1 isof... BRPF1 0.049 bromodomain and PHD finger-containing protein 1 isof... BRD1 0.041 bromodomain containing protein 1 BRPF3 0.037 bromodomain and PHD finger containing, 3 MLLT6 0.037 myeloid/lymphoid or mixed-lineage leukemia (trithora... MLLT10 0.037 myeloid/lymphoid or mixed-lineage leukemia transloca... MLLT10 0.037 myeloid/lymphoid or mixed-lineage leukemia translocat... PHF16 0.036 PHD finger protein 16 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.