Guide to the Human Genome
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Name: OR8I2 Sequence: fasta or formatted (310aa) NCBI GI: 51230656
Description:

olfactory receptor, family 8, subfamily I, member 2

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         19           2
 C cysteine            2.9          9           2
 D aspartate           2.3          7           1
 E glutamate           1.3          4           1
 F phenylalanine       9.4         29           2
 G glycine             4.2         13           1
 H histidine           1.6          5           1
 I isoleucine          8.7         27           4
 K lysine              1.9          6           1
 L leucine            13.2         41           2
 M methionine          3.5         11           1
 N asparagine          4.8         15           2
 P proline             2.9          9           1
 Q glutamine           3.2         10           1
 R arginine            2.9          9           2
 S serine             10.6         33           2
 T threonine           6.8         21           2
 V valine              8.7         27           2
 W tryptophan          0.6          2           1
 Y tyrosine            4.2         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 8, subfamily I, member 2 ... 
OR8H1                 0.574   olfactory receptor, family 8, subfamily H, member 1 ...
OR8H3                 0.568   olfactory receptor, family 8, subfamily H, member 3 ...
OR8H2                 0.552   olfactory receptor, family 8, subfamily H, member 2 ...
OR5F1                 0.535   olfactory receptor, family 5, subfamily F, member 1 ...
OR8A1                 0.528   olfactory receptor, family 8, subfamily A, member 1 ...
OR8U1                 0.518   olfactory receptor, family 8, subfamily U, member 1 ...
OR8U9                 0.518   olfactory receptor, family 8, subfamily U, member 9 ...
OR5R1                 0.516   olfactory receptor, family 5, subfamily R, member 1 ...
OR8U8                 0.515   olfactory receptor, family 8, subfamily U, member 8 ...
OR8D4                 0.506   olfactory receptor, family 8, subfamily D, member 4 ...
OR5M11                0.501   olfactory receptor, family 5, subfamily M, member 11...
OR5B21                0.499   olfactory receptor, family 5, subfamily B, member 21...
OR5D18                0.497   olfactory receptor, family 5, subfamily D, member 18...
OR5A2                 0.496   olfactory receptor, family 5, subfamily A, member 2 ...
OR8D1                 0.494   olfactory receptor, family 8, subfamily D, member 1 ...
OR5AS1                0.492   olfactory receptor, family 5, subfamily AS, member 1...
OR5B2                 0.492   olfactory receptor, family 5, subfamily B, member 2 ...
OR5B12                0.492   olfactory receptor, family 5, subfamily B, member 12...
OR5AR1                0.492   olfactory receptor, family 5, subfamily AR, member 1...
OR5A1                 0.492   olfactory receptor, family 5, subfamily A, member 1 ...
OR5AU1                0.491   olfactory receptor, family 5, subfamily AU, member 1...
OR5AP2                0.489   olfactory receptor, family 5, subfamily AP, member 2...
OR8G1                 0.489   olfactory receptor, family 8, subfamily G, member 1 ...
OR5M8                 0.487   olfactory receptor, family 5, subfamily M, member 8 ...
OR8J1                 0.487   olfactory receptor, family 8, subfamily J, member 1 ...
OR9K2                 0.485   olfactory receptor, family 9, subfamily K, member 2 ...
OR5M3                 0.485   olfactory receptor, family 5, subfamily M, member 3 ...
OR8G5                 0.485   olfactory receptor, family 8, subfamily G, member 5 ...
OR8B3                 0.484   olfactory receptor, family 8, subfamily B, member 3 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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