Guide to the Human Genome
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Name: OR5F1 Sequence: fasta or formatted (314aa) NCBI GI: 53828734
Description:

olfactory receptor, family 5, subfamily F, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         21           2
 C cysteine            2.9          9           1
 D aspartate           2.9          9           1
 E glutamate           2.2          7           1
 F phenylalanine       7.6         24           2
 G glycine             3.5         11           1
 H histidine           2.2          7           2
 I isoleucine          8.0         25           2
 K lysine              3.8         12           2
 L leucine            15.3         48           2
 M methionine          3.5         11           1
 N asparagine          3.5         11           1
 P proline             2.5          8           2
 Q glutamine           1.3          4           1
 R arginine            3.5         11           1
 S serine             12.1         38           3
 T threonine           7.3         23           2
 V valine              6.1         19           2
 W tryptophan          0.0          0           0
 Y tyrosine            5.1         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 5, subfamily F, member 1 ... 
OR8H2                 0.540   olfactory receptor, family 8, subfamily H, member 2 ...
OR8H3                 0.540   olfactory receptor, family 8, subfamily H, member 3 ...
OR8H1                 0.537   olfactory receptor, family 8, subfamily H, member 1 ...
OR5AR1                0.533   olfactory receptor, family 5, subfamily AR, member 1...
OR8I2                 0.533   olfactory receptor, family 8, subfamily I, member 2 ...
OR5AP2                0.523   olfactory receptor, family 5, subfamily AP, member 2...
OR8U9                 0.520   olfactory receptor, family 8, subfamily U, member 9 ...
OR5A2                 0.520   olfactory receptor, family 5, subfamily A, member 2 ...
OR5B21                0.520   olfactory receptor, family 5, subfamily B, member 21...
OR5I1                 0.518   olfactory receptor, family 5, subfamily I, member 1 [...
OR5AU1                0.516   olfactory receptor, family 5, subfamily AU, member 1...
OR5B12                0.514   olfactory receptor, family 5, subfamily B, member 12...
OR8D4                 0.513   olfactory receptor, family 8, subfamily D, member 4 ...
OR8D1                 0.509   olfactory receptor, family 8, subfamily D, member 1 ...
OR5L2                 0.508   olfactory receptor, family 5, subfamily L, member 2 ...
OR5A1                 0.508   olfactory receptor, family 5, subfamily A, member 1 ...
OR5B2                 0.504   olfactory receptor, family 5, subfamily B, member 2 ...
OR8U1                 0.503   olfactory receptor, family 8, subfamily U, member 1 ...
OR5M11                0.503   olfactory receptor, family 5, subfamily M, member 11...
OR5T3                 0.501   olfactory receptor, family 5, subfamily T, member 3 ...
OR8U8                 0.501   olfactory receptor, family 8, subfamily U, member 8 ...
OR5M3                 0.501   olfactory receptor, family 5, subfamily M, member 3 ...
OR5L1                 0.499   olfactory receptor, family 5, subfamily L, member 1 ...
OR8A1                 0.499   olfactory receptor, family 8, subfamily A, member 1 ...
OR5J2                 0.499   olfactory receptor, family 5, subfamily J, member 2 ...
OR5AS1                0.497   olfactory receptor, family 5, subfamily AS, member 1...
OR5B3                 0.497   olfactory receptor, family 5, subfamily B, member 3 ...
OR9G4                 0.496   olfactory receptor, family 9, subfamily G, member 4 ...
OR5M8                 0.491   olfactory receptor, family 5, subfamily M, member 8 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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