Guide to the Human Genome
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Name: OR5R1 Sequence: fasta or formatted (324aa) NCBI GI: 52317138
Description:

olfactory receptor, family 5, subfamily R, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         20           2
 C cysteine            4.0         13           1
 D aspartate           3.4         11           2
 E glutamate           2.2          7           1
 F phenylalanine       7.1         23           1
 G glycine             3.4         11           1
 H histidine           3.1         10           1
 I isoleucine          9.9         32           2
 K lysine              4.3         14           2
 L leucine            12.3         40           2
 M methionine          4.0         13           2
 N asparagine          3.4         11           1
 P proline             3.7         12           1
 Q glutamine           2.2          7           1
 R arginine            3.1         10           2
 S serine              7.1         23           4
 T threonine           7.7         25           1
 V valine              7.4         24           2
 W tryptophan          0.0          0           0
 Y tyrosine            5.6         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 5, subfamily R, member 1 ... 
OR8U1                 0.642   olfactory receptor, family 8, subfamily U, member 1 ...
OR8U9                 0.637   olfactory receptor, family 8, subfamily U, member 9 ...
OR8U8                 0.637   olfactory receptor, family 8, subfamily U, member 8 ...
OR8K3                 0.558   olfactory receptor, family 8, subfamily K, member 3 ...
OR8K1                 0.546   olfactory receptor, family 8, subfamily K, member 1 ...
OR8K5                 0.542   olfactory receptor, family 8, subfamily K, member 5...
OR8J3                 0.540   olfactory receptor, family 8, subfamily J, member 3 ...
OR8J1                 0.534   olfactory receptor, family 8, subfamily J, member 1 ...
OR5AR1                0.529   olfactory receptor, family 5, subfamily AR, member 1...
OR5M11                0.527   olfactory receptor, family 5, subfamily M, member 11...
OR5B12                0.513   olfactory receptor, family 5, subfamily B, member 12...
OR8G5                 0.513   olfactory receptor, family 8, subfamily G, member 5 ...
OR5AP2                0.508   olfactory receptor, family 5, subfamily AP, member 2...
OR5M10                0.505   olfactory receptor, family 5, subfamily M, member 10...
OR8G1                 0.503   olfactory receptor, family 8, subfamily G, member 1 ...
OR5M1                 0.498   olfactory receptor, family 5, subfamily M, member 1 ...
OR8D1                 0.497   olfactory receptor, family 8, subfamily D, member 1 ...
OR8A1                 0.492   olfactory receptor, family 8, subfamily A, member 1 ...
OR5M8                 0.490   olfactory receptor, family 5, subfamily M, member 8 ...
OR8D2                 0.487   olfactory receptor, family 8, subfamily D, member 2 ...
OR8B3                 0.487   olfactory receptor, family 8, subfamily B, member 3 ...
OR5B3                 0.484   olfactory receptor, family 5, subfamily B, member 3 ...
OR8I2                 0.482   olfactory receptor, family 8, subfamily I, member 2 ...
OR5D18                0.482   olfactory receptor, family 5, subfamily D, member 18...
OR5B21                0.481   olfactory receptor, family 5, subfamily B, member 21...
OR8B2                 0.479   olfactory receptor, family 8, subfamily B, member 2 ...
OR5AS1                0.476   olfactory receptor, family 5, subfamily AS, member 1...
OR8H3                 0.474   olfactory receptor, family 8, subfamily H, member 3 ...
OR8H1                 0.471   olfactory receptor, family 8, subfamily H, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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