Guide to the Human Genome
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Name: OR8D4 Sequence: fasta or formatted (314aa) NCBI GI: 52353288
Description:

olfactory receptor, family 8, subfamily D, member 4

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         14           2
 C cysteine            5.1         16           1
 D aspartate           1.9          6           1
 E glutamate           2.2          7           1
 F phenylalanine       6.4         20           3
 G glycine             4.8         15           2
 H histidine           1.9          6           1
 I isoleucine          8.9         28           3
 K lysine              3.5         11           2
 L leucine            14.0         44           2
 M methionine          4.5         14           1
 N asparagine          2.9          9           2
 P proline             2.9          9           1
 Q glutamine           1.6          5           1
 R arginine            4.5         14           2
 S serine             13.1         41           4
 T threonine           5.4         17           2
 V valine              7.3         23           2
 W tryptophan          0.0          0           0
 Y tyrosine            4.8         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 8, subfamily D, member 4 ... 
OR8A1                 0.634   olfactory receptor, family 8, subfamily A, member 1 ...
OR8D1                 0.632   olfactory receptor, family 8, subfamily D, member 1 ...
OR8G1                 0.605   olfactory receptor, family 8, subfamily G, member 1 ...
OR8D2                 0.598   olfactory receptor, family 8, subfamily D, member 2 ...
OR8B8                 0.592   olfactory receptor, family 8, subfamily B, member 8 ...
OR8G5                 0.587   olfactory receptor, family 8, subfamily G, member 5 ...
OR8B3                 0.583   olfactory receptor, family 8, subfamily B, member 3 ...
OR8B2                 0.573   olfactory receptor, family 8, subfamily B, member 2 ...
OR8G2                 0.553   olfactory receptor, family 8, subfamily G, member 2 ...
OR8B12                0.553   olfactory receptor, family 8, subfamily B, member 12...
OR8B4                 0.543   olfactory receptor, family 8, subfamily B, member 4 ...
OR5AU1                0.529   olfactory receptor, family 5, subfamily AU, member 1...
OR8U9                 0.526   olfactory receptor, family 8, subfamily U, member 9 ...
OR8U1                 0.519   olfactory receptor, family 8, subfamily U, member 1 ...
OR8U8                 0.511   olfactory receptor, family 8, subfamily U, member 8 ...
OR5B12                0.508   olfactory receptor, family 5, subfamily B, member 12...
OR5F1                 0.506   olfactory receptor, family 5, subfamily F, member 1 ...
OR5AR1                0.499   olfactory receptor, family 5, subfamily AR, member 1...
OR8I2                 0.497   olfactory receptor, family 8, subfamily I, member 2 ...
OR5W2                 0.497   olfactory receptor, family 5, subfamily W, member 2 ...
OR8H2                 0.496   olfactory receptor, family 8, subfamily H, member 2 ...
OR5D18                0.496   olfactory receptor, family 5, subfamily D, member 18...
OR5B21                0.496   olfactory receptor, family 5, subfamily B, member 21...
OR8H1                 0.494   olfactory receptor, family 8, subfamily H, member 1 ...
OR5R1                 0.492   olfactory receptor, family 5, subfamily R, member 1 ...
OR8H3                 0.492   olfactory receptor, family 8, subfamily H, member 3 ...
OR5P3                 0.491   olfactory receptor, family 5, subfamily P, member 3 ...
OR5AS1                0.491   olfactory receptor, family 5, subfamily AS, member 1...
OR5L2                 0.491   olfactory receptor, family 5, subfamily L, member 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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