Guide to the Human Genome
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Name: OR5AS1 Sequence: fasta or formatted (324aa) NCBI GI: 50054477
Description:

olfactory receptor, family 5, subfamily AS, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         20           2
 C cysteine            4.0         13           1
 D aspartate           2.8          9           1
 E glutamate           1.5          5           1
 F phenylalanine       9.3         30           3
 G glycine             2.8          9           2
 H histidine           0.9          3           1
 I isoleucine          8.0         26           2
 K lysine              2.8          9           2
 L leucine            14.8         48           3
 M methionine          3.1         10           1
 N asparagine          4.9         16           1
 P proline             3.4         11           2
 Q glutamine           1.9          6           1
 R arginine            3.4         11           2
 S serine              9.6         31           2
 T threonine           7.7         25           2
 V valine              7.1         23           2
 W tryptophan          0.3          1           1
 Y tyrosine            5.6         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 5, subfamily AS, member 1... 
OR5I1                 0.546   olfactory receptor, family 5, subfamily I, member 1 [...
OR5AR1                0.546   olfactory receptor, family 5, subfamily AR, member 1...
OR5AP2                0.530   olfactory receptor, family 5, subfamily AP, member 2...
OR5W2                 0.506   olfactory receptor, family 5, subfamily W, member 2 ...
OR8U9                 0.502   olfactory receptor, family 8, subfamily U, member 9 ...
OR8U1                 0.498   olfactory receptor, family 8, subfamily U, member 1 ...
OR8U8                 0.494   olfactory receptor, family 8, subfamily U, member 8 ...
OR5T1                 0.493   olfactory receptor, family 5, subfamily T, member 1 ...
OR5B21                0.493   olfactory receptor, family 5, subfamily B, member 21...
OR8J3                 0.489   olfactory receptor, family 8, subfamily J, member 3 ...
OR5AU1                0.489   olfactory receptor, family 5, subfamily AU, member 1...
OR5T3                 0.485   olfactory receptor, family 5, subfamily T, member 3 ...
OR5C1                 0.483   olfactory receptor, family 5, subfamily C, member 1 ...
OR5B12                0.483   olfactory receptor, family 5, subfamily B, member 12...
OR5R1                 0.481   olfactory receptor, family 5, subfamily R, member 1 ...
OR5A2                 0.478   olfactory receptor, family 5, subfamily A, member 2 ...
OR8J1                 0.475   olfactory receptor, family 8, subfamily J, member 1 ...
OR5K1                 0.473   olfactory receptor, family 5, subfamily K, member 1...
OR5F1                 0.472   olfactory receptor, family 5, subfamily F, member 1 ...
OR8D1                 0.472   olfactory receptor, family 8, subfamily D, member 1 ...
OR9I1                 0.472   olfactory receptor, family 9, subfamily I, member 1 ...
OR5D18                0.472   olfactory receptor, family 5, subfamily D, member 18...
OR8D4                 0.472   olfactory receptor, family 8, subfamily D, member 4 ...
OR9G4                 0.467   olfactory receptor, family 9, subfamily G, member 4 ...
OR5A1                 0.467   olfactory receptor, family 5, subfamily A, member 1 ...
OR8I2                 0.465   olfactory receptor, family 8, subfamily I, member 2 ...
OR5V1                 0.464   olfactory receptor, family 5, subfamily V, member 1 ...
OR5L1                 0.457   olfactory receptor, family 5, subfamily L, member 1 ...
OR5B2                 0.457   olfactory receptor, family 5, subfamily B, member 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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