Guide to the Human Genome
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Name: OR5AU1 Sequence: fasta or formatted (362aa) NCBI GI: 52317257
Description:

olfactory receptor, family 5, subfamily AU, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         22           2
 C cysteine            3.9         14           1
 D aspartate           1.9          7           1
 E glutamate           2.2          8           1
 F phenylalanine       8.0         29           2
 G glycine             4.7         17           1
 H histidine           2.2          8           1
 I isoleucine          6.4         23           1
 K lysine              3.6         13           2
 L leucine            14.4         52           2
 M methionine          4.4         16           1
 N asparagine          2.5          9           1
 P proline             3.9         14           2
 Q glutamine           2.8         10           1
 R arginine            4.4         16           2
 S serine             10.5         38           2
 T threonine           7.5         27           2
 V valine              6.1         22           2
 W tryptophan          0.6          2           1
 Y tyrosine            4.1         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 5, subfamily AU, member 1... 
OR5AP2                0.457   olfactory receptor, family 5, subfamily AP, member 2...
OR5AR1                0.454   olfactory receptor, family 5, subfamily AR, member 1...
OR8D1                 0.453   olfactory receptor, family 8, subfamily D, member 1 ...
OR8D4                 0.451   olfactory receptor, family 8, subfamily D, member 4 ...
OR5B12                0.448   olfactory receptor, family 5, subfamily B, member 12...
OR5B21                0.440   olfactory receptor, family 5, subfamily B, member 21...
OR5F1                 0.434   olfactory receptor, family 5, subfamily F, member 1 ...
OR5AS1                0.434   olfactory receptor, family 5, subfamily AS, member 1...
OR8G5                 0.433   olfactory receptor, family 8, subfamily G, member 5 ...
OR5A1                 0.430   olfactory receptor, family 5, subfamily A, member 1 ...
OR8G1                 0.430   olfactory receptor, family 8, subfamily G, member 1 ...
OR5I1                 0.423   olfactory receptor, family 5, subfamily I, member 1 [...
OR9G4                 0.421   olfactory receptor, family 9, subfamily G, member 4 ...
OR5A2                 0.421   olfactory receptor, family 5, subfamily A, member 2 ...
OR8A1                 0.420   olfactory receptor, family 8, subfamily A, member 1 ...
OR8B8                 0.414   olfactory receptor, family 8, subfamily B, member 8 ...
OR8B3                 0.414   olfactory receptor, family 8, subfamily B, member 3 ...
OR8U8                 0.414   olfactory receptor, family 8, subfamily U, member 8 ...
OR8B12                0.413   olfactory receptor, family 8, subfamily B, member 12...
OR5B2                 0.411   olfactory receptor, family 5, subfamily B, member 2 ...
OR8U1                 0.411   olfactory receptor, family 8, subfamily U, member 1 ...
OR8I2                 0.411   olfactory receptor, family 8, subfamily I, member 2 ...
OR9I1                 0.410   olfactory receptor, family 9, subfamily I, member 1 ...
OR5T1                 0.410   olfactory receptor, family 5, subfamily T, member 1 ...
OR5B3                 0.410   olfactory receptor, family 5, subfamily B, member 3 ...
OR5T2                 0.410   olfactory receptor, family 5, subfamily T, member 2 ...
OR8D2                 0.408   olfactory receptor, family 8, subfamily D, member 2 ...
OR5T3                 0.408   olfactory receptor, family 5, subfamily T, member 3 ...
OR8H2                 0.408   olfactory receptor, family 8, subfamily H, member 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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