Guide to the Human Genome
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Name: OR5AP2 Sequence: fasta or formatted (316aa) NCBI GI: 50979290
Description:

olfactory receptor, family 5, subfamily AP, member 2

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         21           2
 C cysteine            3.5         11           1
 D aspartate           2.8          9           1
 E glutamate           2.2          7           1
 F phenylalanine       8.2         26           2
 G glycine             5.1         16           1
 H histidine           2.2          7           1
 I isoleucine          7.9         25           2
 K lysine              4.7         15           2
 L leucine            13.9         44           3
 M methionine          5.4         17           2
 N asparagine          4.1         13           1
 P proline             3.5         11           2
 Q glutamine           1.3          4           1
 R arginine            2.8          9           1
 S serine              8.9         28           3
 T threonine           4.7         15           1
 V valine              7.0         22           2
 W tryptophan          0.6          2           1
 Y tyrosine            4.4         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 5, subfamily AP, member 2... 
OR5B12                0.547   olfactory receptor, family 5, subfamily B, member 12...
OR5AR1                0.547   olfactory receptor, family 5, subfamily AR, member 1...
OR5W2                 0.544   olfactory receptor, family 5, subfamily W, member 2 ...
OR5I1                 0.544   olfactory receptor, family 5, subfamily I, member 1 [...
OR5AS1                0.540   olfactory receptor, family 5, subfamily AS, member 1...
OR5B21                0.532   olfactory receptor, family 5, subfamily B, member 21...
OR5T3                 0.530   olfactory receptor, family 5, subfamily T, member 3 ...
OR8U9                 0.529   olfactory receptor, family 8, subfamily U, member 9 ...
OR5AU1                0.526   olfactory receptor, family 5, subfamily AU, member 1...
OR5T1                 0.526   olfactory receptor, family 5, subfamily T, member 1 ...
OR5R1                 0.524   olfactory receptor, family 5, subfamily R, member 1 ...
OR8U8                 0.524   olfactory receptor, family 8, subfamily U, member 8 ...
OR8U1                 0.519   olfactory receptor, family 8, subfamily U, member 1 ...
OR5T2                 0.519   olfactory receptor, family 5, subfamily T, member 2 ...
OR9I1                 0.516   olfactory receptor, family 9, subfamily I, member 1 ...
OR5F1                 0.506   olfactory receptor, family 5, subfamily F, member 1 ...
OR5B3                 0.504   olfactory receptor, family 5, subfamily B, member 3 ...
OR5J2                 0.504   olfactory receptor, family 5, subfamily J, member 2 ...
OR5M11                0.501   olfactory receptor, family 5, subfamily M, member 11...
OR8G1                 0.499   olfactory receptor, family 8, subfamily G, member 1 ...
OR5A2                 0.499   olfactory receptor, family 5, subfamily A, member 2 ...
OR9G4                 0.499   olfactory receptor, family 9, subfamily G, member 4 ...
OR5B2                 0.493   olfactory receptor, family 5, subfamily B, member 2 ...
OR5A1                 0.489   olfactory receptor, family 5, subfamily A, member 1 ...
OR8K3                 0.489   olfactory receptor, family 8, subfamily K, member 3 ...
OR5B17                0.489   olfactory receptor, family 5, subfamily B, member 17...
OR5P3                 0.486   olfactory receptor, family 5, subfamily P, member 3 ...
OR5D18                0.484   olfactory receptor, family 5, subfamily D, member 18...
OR5L1                 0.481   olfactory receptor, family 5, subfamily L, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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