Guide to the Human Genome
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Name: OR8U9 Sequence: fasta or formatted (309aa) NCBI GI: 61656212
Description:

olfactory receptor, family 8, subfamily U, member 9

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         21           2
 C cysteine            3.9         12           1
 D aspartate           2.9          9           2
 E glutamate           2.3          7           1
 F phenylalanine       7.8         24           2
 G glycine             3.2         10           1
 H histidine           2.3          7           1
 I isoleucine          9.1         28           3
 K lysine              3.9         12           2
 L leucine            13.6         42           3
 M methionine          5.5         17           1
 N asparagine          4.5         14           1
 P proline             3.2         10           1
 Q glutamine           3.2         10           1
 R arginine            2.6          8           1
 S serine              8.1         25           3
 T threonine           5.8         18           1
 V valine              6.1         19           2
 W tryptophan          0.3          1           1
 Y tyrosine            4.9         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 8, subfamily U, member 9 ... 
OR8U1                 0.938   olfactory receptor, family 8, subfamily U, member 1 ...
OR8U8                 0.895   olfactory receptor, family 8, subfamily U, member 8 ...
OR5R1                 0.674   olfactory receptor, family 5, subfamily R, member 1 ...
OR5AR1                0.562   olfactory receptor, family 5, subfamily AR, member 1...
OR5B12                0.557   olfactory receptor, family 5, subfamily B, member 12...
OR8K3                 0.554   olfactory receptor, family 8, subfamily K, member 3 ...
OR8K5                 0.554   olfactory receptor, family 8, subfamily K, member 5...
OR8K1                 0.551   olfactory receptor, family 8, subfamily K, member 1 ...
OR8D1                 0.551   olfactory receptor, family 8, subfamily D, member 1 ...
OR8J3                 0.547   olfactory receptor, family 8, subfamily J, member 3 ...
OR8J1                 0.546   olfactory receptor, family 8, subfamily J, member 1 ...
OR5AP2                0.542   olfactory receptor, family 5, subfamily AP, member 2...
OR5B21                0.537   olfactory receptor, family 5, subfamily B, member 21...
OR5T3                 0.535   olfactory receptor, family 5, subfamily T, member 3 ...
OR5T1                 0.534   olfactory receptor, family 5, subfamily T, member 1 ...
OR5M11                0.530   olfactory receptor, family 5, subfamily M, member 11...
OR5B3                 0.530   olfactory receptor, family 5, subfamily B, member 3 ...
OR5M8                 0.529   olfactory receptor, family 5, subfamily M, member 8 ...
OR8D4                 0.529   olfactory receptor, family 8, subfamily D, member 4 ...
OR5AS1                0.525   olfactory receptor, family 5, subfamily AS, member 1...
OR5B2                 0.524   olfactory receptor, family 5, subfamily B, member 2 ...
OR8B8                 0.522   olfactory receptor, family 8, subfamily B, member 8 ...
OR5M10                0.519   olfactory receptor, family 5, subfamily M, member 10...
OR8H3                 0.517   olfactory receptor, family 8, subfamily H, member 3 ...
OR5F1                 0.515   olfactory receptor, family 5, subfamily F, member 1 ...
OR8G1                 0.515   olfactory receptor, family 8, subfamily G, member 1 ...
OR5W2                 0.514   olfactory receptor, family 5, subfamily W, member 2 ...
OR5J2                 0.514   olfactory receptor, family 5, subfamily J, member 2 ...
OR8A1                 0.512   olfactory receptor, family 8, subfamily A, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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