Guide to the Human Genome
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Name: OR8D1 Sequence: fasta or formatted (308aa) NCBI GI: 50897282
Description:

olfactory receptor, family 8, subfamily D, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         20           2
 C cysteine            2.6          8           1
 D aspartate           1.9          6           1
 E glutamate           2.3          7           1
 F phenylalanine       8.1         25           3
 G glycine             3.9         12           1
 H histidine           2.3          7           1
 I isoleucine          5.8         18           2
 K lysine              4.2         13           2
 L leucine            15.9         49           3
 M methionine          4.5         14           2
 N asparagine          4.2         13           1
 P proline             3.6         11           2
 Q glutamine           1.9          6           2
 R arginine            1.6          5           1
 S serine             10.4         32           2
 T threonine           5.2         16           2
 V valine              9.4         29           2
 W tryptophan          0.3          1           1
 Y tyrosine            5.2         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 8, subfamily D, member 1 ... 
OR8D2                 0.722   olfactory receptor, family 8, subfamily D, member 2 ...
OR8G1                 0.662   olfactory receptor, family 8, subfamily G, member 1 ...
OR8D4                 0.648   olfactory receptor, family 8, subfamily D, member 4 ...
OR8G5                 0.641   olfactory receptor, family 8, subfamily G, member 5 ...
OR8A1                 0.638   olfactory receptor, family 8, subfamily A, member 1 ...
OR8B8                 0.638   olfactory receptor, family 8, subfamily B, member 8 ...
OR8B3                 0.633   olfactory receptor, family 8, subfamily B, member 3 ...
OR8B2                 0.617   olfactory receptor, family 8, subfamily B, member 2 ...
OR8G2                 0.600   olfactory receptor, family 8, subfamily G, member 2 ...
OR8B12                0.595   olfactory receptor, family 8, subfamily B, member 12...
OR8U8                 0.572   olfactory receptor, family 8, subfamily U, member 8 ...
OR8B4                 0.571   olfactory receptor, family 8, subfamily B, member 4 ...
OR8U1                 0.564   olfactory receptor, family 8, subfamily U, member 1 ...
OR8U9                 0.562   olfactory receptor, family 8, subfamily U, member 9 ...
OR5B12                0.555   olfactory receptor, family 5, subfamily B, member 12...
OR5AU1                0.545   olfactory receptor, family 5, subfamily AU, member 1...
OR5AR1                0.538   olfactory receptor, family 5, subfamily AR, member 1...
OR5R1                 0.536   olfactory receptor, family 5, subfamily R, member 1 ...
OR5D18                0.526   olfactory receptor, family 5, subfamily D, member 18...
OR5B3                 0.516   olfactory receptor, family 5, subfamily B, member 3 ...
OR5F1                 0.516   olfactory receptor, family 5, subfamily F, member 1 ...
OR5M8                 0.509   olfactory receptor, family 5, subfamily M, member 8 ...
OR5B2                 0.509   olfactory receptor, family 5, subfamily B, member 2 ...
OR5J2                 0.509   olfactory receptor, family 5, subfamily J, member 2 ...
OR8J3                 0.507   olfactory receptor, family 8, subfamily J, member 3 ...
OR5L2                 0.507   olfactory receptor, family 5, subfamily L, member 2 ...
OR5AS1                0.503   olfactory receptor, family 5, subfamily AS, member 1...
OR5I1                 0.503   olfactory receptor, family 5, subfamily I, member 1 [...
OR5AP2                0.503   olfactory receptor, family 5, subfamily AP, member 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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