Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: OR5B2 Sequence: fasta or formatted (309aa) NCBI GI: 53933201
Description:

olfactory receptor, family 5, subfamily B, member 2

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         23           2
 C cysteine            3.6         11           1
 D aspartate           2.6          8           1
 E glutamate           1.9          6           1
 F phenylalanine       9.7         30           3
 G glycine             4.2         13           2
 H histidine           3.2         10           2
 I isoleucine          6.1         19           2
 K lysine              4.2         13           2
 L leucine            12.6         39           2
 M methionine          5.2         16           2
 N asparagine          3.6         11           1
 P proline             2.9          9           1
 Q glutamine           1.9          6           1
 R arginine            1.9          6           2
 S serine              9.7         30           3
 T threonine           5.8         18           3
 V valine              8.7         27           2
 W tryptophan          0.0          0           0
 Y tyrosine            4.5         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 5, subfamily B, member 2 ... 
OR5B3                 0.777   olfactory receptor, family 5, subfamily B, member 3 ...
OR5B12                0.746   olfactory receptor, family 5, subfamily B, member 12...
OR5B17                0.723   olfactory receptor, family 5, subfamily B, member 17...
OR5B21                0.675   olfactory receptor, family 5, subfamily B, member 21...
OR5AR1                0.548   olfactory receptor, family 5, subfamily AR, member 1...
OR8U1                 0.526   olfactory receptor, family 8, subfamily U, member 1 ...
OR8U9                 0.525   olfactory receptor, family 8, subfamily U, member 9 ...
OR8U8                 0.521   olfactory receptor, family 8, subfamily U, member 8 ...
OR5AP2                0.506   olfactory receptor, family 5, subfamily AP, member 2...
OR5F1                 0.501   olfactory receptor, family 5, subfamily F, member 1 ...
OR8D1                 0.499   olfactory receptor, family 8, subfamily D, member 1 ...
OR5T3                 0.497   olfactory receptor, family 5, subfamily T, member 3 ...
OR8H3                 0.496   olfactory receptor, family 8, subfamily H, member 3 ...
OR5L1                 0.494   olfactory receptor, family 5, subfamily L, member 1 ...
OR8H2                 0.492   olfactory receptor, family 8, subfamily H, member 2 ...
OR5R1                 0.492   olfactory receptor, family 5, subfamily R, member 1 ...
OR9I1                 0.491   olfactory receptor, family 9, subfamily I, member 1 ...
OR8I2                 0.487   olfactory receptor, family 8, subfamily I, member 2 ...
OR8G1                 0.487   olfactory receptor, family 8, subfamily G, member 1 ...
OR5AU1                0.486   olfactory receptor, family 5, subfamily AU, member 1...
OR8K1                 0.482   olfactory receptor, family 8, subfamily K, member 1 ...
OR8H1                 0.482   olfactory receptor, family 8, subfamily H, member 1 ...
OR8G5                 0.481   olfactory receptor, family 8, subfamily G, member 5 ...
OR5L2                 0.481   olfactory receptor, family 5, subfamily L, member 2 ...
OR8D4                 0.479   olfactory receptor, family 8, subfamily D, member 4 ...
OR5AS1                0.479   olfactory receptor, family 5, subfamily AS, member 1...
OR5A2                 0.474   olfactory receptor, family 5, subfamily A, member 2 ...
OR9G4                 0.474   olfactory receptor, family 9, subfamily G, member 4 ...
OR8J3                 0.469   olfactory receptor, family 8, subfamily J, member 3 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press