Guide to the Human Genome
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Name: OR5D18 Sequence: fasta or formatted (313aa) NCBI GI: 53828678
Description:

olfactory receptor, family 5, subfamily D, member 18

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         13           1
 C cysteine            3.8         12           1
 D aspartate           2.9          9           1
 E glutamate           1.9          6           1
 F phenylalanine       9.6         30           4
 G glycine             3.2         10           1
 H histidine           1.9          6           1
 I isoleucine          7.0         22           2
 K lysine              4.2         13           1
 L leucine            14.1         44           2
 M methionine          2.2          7           1
 N asparagine          4.8         15           1
 P proline             2.9          9           1
 Q glutamine           1.6          5           1
 R arginine            2.6          8           2
 S serine              9.3         29           2
 T threonine           8.6         27           2
 V valine             10.5         33           2
 W tryptophan          0.6          2           1
 Y tyrosine            4.2         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 5, subfamily D, member 18... 
OR5D16                0.805   olfactory receptor, family 5, subfamily D, member 16...
OR5D14                0.694   olfactory receptor, family 5, subfamily D, member 14...
OR5D13                0.633   olfactory receptor, family 5, subfamily D, member 13...
OR5L1                 0.599   olfactory receptor, family 5, subfamily L, member 1 ...
OR5L2                 0.591   olfactory receptor, family 5, subfamily L, member 2 ...
OR5I1                 0.553   olfactory receptor, family 5, subfamily I, member 1 [...
OR5B12                0.511   olfactory receptor, family 5, subfamily B, member 12...
OR8D1                 0.509   olfactory receptor, family 8, subfamily D, member 1 ...
OR5R1                 0.504   olfactory receptor, family 5, subfamily R, member 1 ...
OR5B21                0.497   olfactory receptor, family 5, subfamily B, member 21...
OR8U8                 0.494   olfactory receptor, family 8, subfamily U, member 8 ...
OR5J2                 0.494   olfactory receptor, family 5, subfamily J, member 2 ...
OR8U1                 0.494   olfactory receptor, family 8, subfamily U, member 1 ...
OR5AR1                0.492   olfactory receptor, family 5, subfamily AR, member 1...
OR8D4                 0.492   olfactory receptor, family 8, subfamily D, member 4 ...
OR5T1                 0.492   olfactory receptor, family 5, subfamily T, member 1 ...
OR5AP2                0.491   olfactory receptor, family 5, subfamily AP, member 2...
OR5W2                 0.489   olfactory receptor, family 5, subfamily W, member 2 ...
OR5AS1                0.487   olfactory receptor, family 5, subfamily AS, member 1...
OR8G1                 0.487   olfactory receptor, family 8, subfamily G, member 1 ...
OR8U9                 0.487   olfactory receptor, family 8, subfamily U, member 9 ...
OR8I2                 0.486   olfactory receptor, family 8, subfamily I, member 2 ...
OR8B12                0.482   olfactory receptor, family 8, subfamily B, member 12...
OR8J3                 0.479   olfactory receptor, family 8, subfamily J, member 3 ...
OR5T3                 0.477   olfactory receptor, family 5, subfamily T, member 3 ...
OR8B8                 0.477   olfactory receptor, family 8, subfamily B, member 8 ...
OR8J1                 0.477   olfactory receptor, family 8, subfamily J, member 1 ...
OR5A2                 0.476   olfactory receptor, family 5, subfamily A, member 2 ...
OR8D2                 0.476   olfactory receptor, family 8, subfamily D, member 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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