Guide to the Human Genome
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Name: OR8B3 Sequence: fasta or formatted (313aa) NCBI GI: 53793667
Description:

olfactory receptor, family 8, subfamily B, member 3

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         16           2
 C cysteine            3.5         11           1
 D aspartate           1.6          5           1
 E glutamate           1.6          5           1
 F phenylalanine       8.0         25           3
 G glycine             4.2         13           1
 H histidine           2.6          8           1
 I isoleucine          8.6         27           2
 K lysine              3.8         12           2
 L leucine            12.8         40           2
 M methionine          5.1         16           1
 N asparagine          5.1         16           2
 P proline             2.9          9           1
 Q glutamine           2.6          8           2
 R arginine            2.6          8           2
 S serine              9.6         30           2
 T threonine           6.1         19           1
 V valine              8.9         28           3
 W tryptophan          0.0          0           0
 Y tyrosine            5.4         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 8, subfamily B, member 3 ... 
OR8B2                 0.977   olfactory receptor, family 8, subfamily B, member 2 ...
OR8B8                 0.719   olfactory receptor, family 8, subfamily B, member 8 ...
OR8B12                0.673   olfactory receptor, family 8, subfamily B, member 12...
OR8G1                 0.667   olfactory receptor, family 8, subfamily G, member 1 ...
OR8B4                 0.662   olfactory receptor, family 8, subfamily B, member 4 ...
OR8G5                 0.652   olfactory receptor, family 8, subfamily G, member 5 ...
OR8A1                 0.625   olfactory receptor, family 8, subfamily A, member 1 ...
OR8G2                 0.618   olfactory receptor, family 8, subfamily G, member 2 ...
OR8D1                 0.615   olfactory receptor, family 8, subfamily D, member 1 ...
OR8D2                 0.593   olfactory receptor, family 8, subfamily D, member 2 ...
OR8D4                 0.581   olfactory receptor, family 8, subfamily D, member 4 ...
OR8U8                 0.514   olfactory receptor, family 8, subfamily U, member 8 ...
OR5B12                0.511   olfactory receptor, family 5, subfamily B, member 12...
OR5R1                 0.511   olfactory receptor, family 5, subfamily R, member 1 ...
OR8J3                 0.503   olfactory receptor, family 8, subfamily J, member 3 ...
OR8U1                 0.499   olfactory receptor, family 8, subfamily U, member 1 ...
OR8U9                 0.492   olfactory receptor, family 8, subfamily U, member 9 ...
OR5AR1                0.491   olfactory receptor, family 5, subfamily AR, member 1...
OR5AP2                0.486   olfactory receptor, family 5, subfamily AP, member 2...
OR5AU1                0.484   olfactory receptor, family 5, subfamily AU, member 1...
OR5M11                0.482   olfactory receptor, family 5, subfamily M, member 11...
OR9G4                 0.482   olfactory receptor, family 9, subfamily G, member 4 ...
OR9I1                 0.479   olfactory receptor, family 9, subfamily I, member 1 ...
OR8H1                 0.479   olfactory receptor, family 8, subfamily H, member 1 ...
OR5B21                0.479   olfactory receptor, family 5, subfamily B, member 21...
OR5A2                 0.479   olfactory receptor, family 5, subfamily A, member 2 ...
OR8H2                 0.474   olfactory receptor, family 8, subfamily H, member 2 ...
OR8I2                 0.474   olfactory receptor, family 8, subfamily I, member 2 ...
OR5D18                0.471   olfactory receptor, family 5, subfamily D, member 18...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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