Guide to the Human Genome
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Name: OR5M11 Sequence: fasta or formatted (305aa) NCBI GI: 52546741
Description:

olfactory receptor, family 5, subfamily M, member 11

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         22           2
 C cysteine            3.6         11           1
 D aspartate           3.3         10           1
 E glutamate           2.6          8           2
 F phenylalanine       7.9         24           2
 G glycine             3.6         11           1
 H histidine           1.6          5           1
 I isoleucine          6.9         21           2
 K lysine              3.6         11           1
 L leucine            13.4         41           3
 M methionine          3.9         12           2
 N asparagine          3.6         11           1
 P proline             3.6         11           2
 Q glutamine           1.6          5           1
 R arginine            4.3         13           2
 S serine              8.5         26           3
 T threonine           7.9         24           1
 V valine              6.9         21           2
 W tryptophan          0.0          0           0
 Y tyrosine            5.9         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 5, subfamily M, member 11... 
OR5M1                 0.683   olfactory receptor, family 5, subfamily M, member 1 ...
OR5M10                0.679   olfactory receptor, family 5, subfamily M, member 10...
OR5M3                 0.587   olfactory receptor, family 5, subfamily M, member 3 ...
OR5M8                 0.583   olfactory receptor, family 5, subfamily M, member 8 ...
OR5R1                 0.566   olfactory receptor, family 5, subfamily R, member 1 ...
OR5M9                 0.561   olfactory receptor, family 5, subfamily M, member 9 ...
OR8U1                 0.544   olfactory receptor, family 8, subfamily U, member 1 ...
OR8U9                 0.539   olfactory receptor, family 8, subfamily U, member 9 ...
OR8U8                 0.535   olfactory receptor, family 8, subfamily U, member 8 ...
OR5AP2                0.521   olfactory receptor, family 5, subfamily AP, member 2...
OR5AR1                0.508   olfactory receptor, family 5, subfamily AR, member 1...
OR5F1                 0.506   olfactory receptor, family 5, subfamily F, member 1 ...
OR8I2                 0.503   olfactory receptor, family 8, subfamily I, member 2 ...
OR5B12                0.499   olfactory receptor, family 5, subfamily B, member 12...
OR8J3                 0.497   olfactory receptor, family 8, subfamily J, member 3 ...
OR8B3                 0.494   olfactory receptor, family 8, subfamily B, member 3 ...
OR8J1                 0.494   olfactory receptor, family 8, subfamily J, member 1 ...
OR5L1                 0.489   olfactory receptor, family 5, subfamily L, member 1 ...
OR8H3                 0.489   olfactory receptor, family 8, subfamily H, member 3 ...
OR8H2                 0.485   olfactory receptor, family 8, subfamily H, member 2 ...
OR8A1                 0.485   olfactory receptor, family 8, subfamily A, member 1 ...
OR8H1                 0.485   olfactory receptor, family 8, subfamily H, member 1 ...
OR8B2                 0.484   olfactory receptor, family 8, subfamily B, member 2 ...
OR2B6                 0.482   olfactory receptor, family 2, subfamily B, member 6 ...
OR5A2                 0.482   olfactory receptor, family 5, subfamily A, member 2 ...
OR5B21                0.482   olfactory receptor, family 5, subfamily B, member 21...
OR5L2                 0.480   olfactory receptor, family 5, subfamily L, member 2 ...
OR8D4                 0.480   olfactory receptor, family 8, subfamily D, member 4 ...
OR8D1                 0.480   olfactory receptor, family 8, subfamily D, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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