Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: OR5B21 Sequence: fasta or formatted (309aa) NCBI GI: 57634530
Description:

olfactory receptor, family 5, subfamily B, member 21

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         26           2
 C cysteine            2.9          9           1
 D aspartate           3.6         11           2
 E glutamate           2.3          7           1
 F phenylalanine       8.1         25           4
 G glycine             5.2         16           2
 H histidine           2.9          9           1
 I isoleucine          7.4         23           2
 K lysine              3.2         10           2
 L leucine            12.9         40           3
 M methionine          2.9          9           2
 N asparagine          3.9         12           1
 P proline             3.6         11           2
 Q glutamine           2.3          7           1
 R arginine            2.3          7           1
 S serine              9.4         29           2
 T threonine           6.8         21           3
 V valine              6.8         21           2
 W tryptophan          0.3          1           1
 Y tyrosine            4.9         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 5, subfamily B, member 21... 
OR5B12                0.698   olfactory receptor, family 5, subfamily B, member 12...
OR5B2                 0.674   olfactory receptor, family 5, subfamily B, member 2 ...
OR5B3                 0.660   olfactory receptor, family 5, subfamily B, member 3 ...
OR5B17                0.630   olfactory receptor, family 5, subfamily B, member 17...
OR5AR1                0.598   olfactory receptor, family 5, subfamily AR, member 1...
OR5AP2                0.546   olfactory receptor, family 5, subfamily AP, member 2...
OR9G4                 0.537   olfactory receptor, family 9, subfamily G, member 4 ...
OR8U9                 0.537   olfactory receptor, family 8, subfamily U, member 9 ...
OR8U1                 0.530   olfactory receptor, family 8, subfamily U, member 1 ...
OR5A1                 0.529   olfactory receptor, family 5, subfamily A, member 1 ...
OR8U8                 0.522   olfactory receptor, family 8, subfamily U, member 8 ...
OR9Q2                 0.519   olfactory receptor, family 9, subfamily Q, member 2 ...
OR5AU1                0.519   olfactory receptor, family 5, subfamily AU, member 1...
OR5T3                 0.519   olfactory receptor, family 5, subfamily T, member 3 ...
OR5W2                 0.517   olfactory receptor, family 5, subfamily W, member 2 ...
OR9I1                 0.515   olfactory receptor, family 9, subfamily I, member 1 ...
OR8H3                 0.515   olfactory receptor, family 8, subfamily H, member 3 ...
OR5AS1                0.515   olfactory receptor, family 5, subfamily AS, member 1...
OR5F1                 0.515   olfactory receptor, family 5, subfamily F, member 1 ...
OR8H2                 0.508   olfactory receptor, family 8, subfamily H, member 2 ...
OR5R1                 0.508   olfactory receptor, family 5, subfamily R, member 1 ...
OR5I1                 0.507   olfactory receptor, family 5, subfamily I, member 1 [...
OR5T1                 0.505   olfactory receptor, family 5, subfamily T, member 1 ...
OR5D18                0.503   olfactory receptor, family 5, subfamily D, member 18...
OR5T2                 0.502   olfactory receptor, family 5, subfamily T, member 2 ...
OR5A2                 0.502   olfactory receptor, family 5, subfamily A, member 2 ...
OR8D4                 0.498   olfactory receptor, family 8, subfamily D, member 4 ...
OR8H1                 0.497   olfactory receptor, family 8, subfamily H, member 1 ...
OR5M1                 0.497   olfactory receptor, family 5, subfamily M, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press