Guide to the Human Genome
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Name: OR8H1 Sequence: fasta or formatted (311aa) NCBI GI: 52353290
Description:

olfactory receptor, family 8, subfamily H, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         15           2
 C cysteine            2.9          9           2
 D aspartate           3.5         11           1
 E glutamate           1.6          5           2
 F phenylalanine       6.8         21           3
 G glycine             3.9         12           1
 H histidine           1.9          6           1
 I isoleucine          9.6         30           2
 K lysine              2.9          9           1
 L leucine            13.2         41           2
 M methionine          5.1         16           1
 N asparagine          4.2         13           2
 P proline             3.2         10           1
 Q glutamine           2.3          7           1
 R arginine            4.8         15           2
 S serine             10.3         32           2
 T threonine           6.8         21           1
 V valine              7.1         22           2
 W tryptophan          0.3          1           1
 Y tyrosine            4.8         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 8, subfamily H, member 1 ... 
OR8H3                 0.893   olfactory receptor, family 8, subfamily H, member 3 ...
OR8H2                 0.872   olfactory receptor, family 8, subfamily H, member 2 ...
OR8I2                 0.571   olfactory receptor, family 8, subfamily I, member 2 ...
OR5F1                 0.536   olfactory receptor, family 5, subfamily F, member 1 ...
OR5B12                0.515   olfactory receptor, family 5, subfamily B, member 12...
OR8U9                 0.515   olfactory receptor, family 8, subfamily U, member 9 ...
OR8U8                 0.507   olfactory receptor, family 8, subfamily U, member 8 ...
OR8U1                 0.505   olfactory receptor, family 8, subfamily U, member 1 ...
OR5R1                 0.502   olfactory receptor, family 5, subfamily R, member 1 ...
OR5A1                 0.500   olfactory receptor, family 5, subfamily A, member 1 ...
OR5B21                0.500   olfactory receptor, family 5, subfamily B, member 21...
OR8D4                 0.500   olfactory receptor, family 8, subfamily D, member 4 ...
OR5AP2                0.495   olfactory receptor, family 5, subfamily AP, member 2...
OR5AR1                0.493   olfactory receptor, family 5, subfamily AR, member 1...
OR8A1                 0.490   olfactory receptor, family 8, subfamily A, member 1 ...
OR8G1                 0.490   olfactory receptor, family 8, subfamily G, member 1 ...
OR5A2                 0.490   olfactory receptor, family 5, subfamily A, member 2 ...
OR8B3                 0.486   olfactory receptor, family 8, subfamily B, member 3 ...
OR8K3                 0.486   olfactory receptor, family 8, subfamily K, member 3 ...
OR5T3                 0.485   olfactory receptor, family 5, subfamily T, member 3 ...
OR5B2                 0.485   olfactory receptor, family 5, subfamily B, member 2 ...
OR8D2                 0.481   olfactory receptor, family 8, subfamily D, member 2 ...
OR5M11                0.481   olfactory receptor, family 5, subfamily M, member 11...
OR5B17                0.481   olfactory receptor, family 5, subfamily B, member 17...
OR5AU1                0.481   olfactory receptor, family 5, subfamily AU, member 1...
OR8K1                 0.480   olfactory receptor, family 8, subfamily K, member 1 ...
OR8J3                 0.480   olfactory receptor, family 8, subfamily J, member 3 ...
OR8D1                 0.478   olfactory receptor, family 8, subfamily D, member 1 ...
OR5T1                 0.478   olfactory receptor, family 5, subfamily T, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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