Guide to the Human Genome
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Name: OR5B12 Sequence: fasta or formatted (314aa) NCBI GI: 52317108
Description:

olfactory receptor, family 5, subfamily B, member 12

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         21           2
 C cysteine            3.2         10           1
 D aspartate           3.2         10           2
 E glutamate           3.2         10           1
 F phenylalanine      10.8         34           4
 G glycine             5.1         16           1
 H histidine           1.9          6           1
 I isoleucine          8.3         26           1
 K lysine              3.8         12           2
 L leucine            11.5         36           2
 M methionine          4.1         13           1
 N asparagine          4.5         14           2
 P proline             3.5         11           2
 Q glutamine           1.0          3           1
 R arginine            2.2          7           1
 S serine              8.3         26           2
 T threonine           7.3         23           3
 V valine              7.0         22           2
 W tryptophan          0.0          0           0
 Y tyrosine            4.5         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 5, subfamily B, member 12... 
OR5B2                 0.730   olfactory receptor, family 5, subfamily B, member 2 ...
OR5B3                 0.730   olfactory receptor, family 5, subfamily B, member 3 ...
OR5B21                0.684   olfactory receptor, family 5, subfamily B, member 21...
OR5B17                0.674   olfactory receptor, family 5, subfamily B, member 17...
OR5AR1                0.604   olfactory receptor, family 5, subfamily AR, member 1...
OR8U1                 0.550   olfactory receptor, family 8, subfamily U, member 1 ...
OR5AP2                0.550   olfactory receptor, family 5, subfamily AP, member 2...
OR8U9                 0.546   olfactory receptor, family 8, subfamily U, member 9 ...
OR8U8                 0.546   olfactory receptor, family 8, subfamily U, member 8 ...
OR8D1                 0.533   olfactory receptor, family 8, subfamily D, member 1 ...
OR5R1                 0.531   olfactory receptor, family 5, subfamily R, member 1 ...
OR8G1                 0.523   olfactory receptor, family 8, subfamily G, member 1 ...
OR5AU1                0.518   olfactory receptor, family 5, subfamily AU, member 1...
OR8H2                 0.513   olfactory receptor, family 8, subfamily H, member 2 ...
OR8K1                 0.513   olfactory receptor, family 8, subfamily K, member 1 ...
OR8G5                 0.512   olfactory receptor, family 8, subfamily G, member 5 ...
OR8B12                0.512   olfactory receptor, family 8, subfamily B, member 12...
OR9I1                 0.510   olfactory receptor, family 9, subfamily I, member 1 ...
OR5T3                 0.510   olfactory receptor, family 5, subfamily T, member 3 ...
OR8H3                 0.508   olfactory receptor, family 8, subfamily H, member 3 ...
OR9G4                 0.507   olfactory receptor, family 9, subfamily G, member 4 ...
OR8B8                 0.507   olfactory receptor, family 8, subfamily B, member 8 ...
OR5D18                0.507   olfactory receptor, family 5, subfamily D, member 18...
OR8B3                 0.505   olfactory receptor, family 8, subfamily B, member 3 ...
OR5A2                 0.505   olfactory receptor, family 5, subfamily A, member 2 ...
OR8J3                 0.503   olfactory receptor, family 8, subfamily J, member 3 ...
OR8D2                 0.503   olfactory receptor, family 8, subfamily D, member 2 ...
OR8H1                 0.502   olfactory receptor, family 8, subfamily H, member 1 ...
OR8D4                 0.500   olfactory receptor, family 8, subfamily D, member 4 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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