Guide to the Human Genome
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Search of human proteins with 50845428

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|50845428 atrial/embryonic alkali myosin light chain [Homo
sapiens]
         (197 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4557038 atrial/embryonic alkali myosin light chain [Homo sapi...   400   e-112
gi|50845428 atrial/embryonic alkali myosin light chain [Homo sap...   400   e-112
gi|4557777 slow skeletal ventricular myosin alkali light chain 3...   320   4e-88
gi|17986273 fast skeletal myosin alkali light chain 1 isoform 1f...   275   1e-74
gi|4505303 smooth muscle and non-muscle myosin alkali light chai...   251   3e-67
gi|17986258 myosin, light chain 6, alkali, smooth muscle and non...   242   1e-64
gi|88999583 myosin, light chain 6, alkali, smooth muscle and non...   233   1e-61
gi|17986275 fast skeletal myosin alkali light chain 1 isoform 3f...   228   2e-60
gi|58218968 calmodulin 3 [Homo sapiens]                               108   2e-24
gi|4502549 calmodulin 2 [Homo sapiens]                                108   2e-24
gi|5901912 calmodulin 1 [Homo sapiens]                                108   2e-24
gi|4885111 calmodulin-like 3 [Homo sapiens]                           108   4e-24
gi|110227594 calmodulin-like 4 isoform 1 [Homo sapiens]                79   2e-15
gi|4507617 fast skeletal muscle troponin C [Homo sapiens]              74   6e-14
gi|4507615 troponin C, slow [Homo sapiens]                             69   2e-12
gi|50897266 calmodulin-like 6 [Homo sapiens]                           69   3e-12
gi|4757974 centrin 1 [Homo sapiens]                                    66   2e-11
gi|4757902 caltractin [Homo sapiens]                                   65   3e-11
gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo...    64   6e-11
gi|222144324 myosin regulatory light chain MRCL2 isoform A [Homo...    64   6e-11
gi|15809016 myosin regulatory light chain MRCL2 isoform A [Homo ...    64   6e-11
gi|5453740 myosin, light chain 12A, regulatory, non-sarcomeric [...    64   8e-11
gi|222144328 myosin regulatory light chain MRCL2 isoform B [Homo...    63   1e-10
gi|169167243 PREDICTED: similar to myosin regulatory light chain...    62   2e-10
gi|29568111 myosin regulatory light chain 9 isoform a [Homo sapi...    62   2e-10
gi|88981341 PREDICTED: similar to myosin regulatory light chain ...    62   3e-10
gi|51464364 PREDICTED: similar to myosin regulatory light chain ...    62   3e-10
gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens]        62   3e-10
gi|46397403 centrin 3 [Homo sapiens]                                   60   9e-10
gi|21624641 calcium binding protein 4 [Homo sapiens]                   60   2e-09

>gi|4557038 atrial/embryonic alkali myosin light chain [Homo
           sapiens]
          Length = 197

 Score =  400 bits (1027), Expect = e-112
 Identities = 197/197 (100%), Positives = 197/197 (100%)

Query: 1   MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAF 60
           MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAF
Sbjct: 1   MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAF 60

Query: 61  SLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPIL 120
           SLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPIL
Sbjct: 61  SLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPIL 120

Query: 121 QHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQED 180
           QHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQED
Sbjct: 121 QHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQED 180

Query: 181 ANGCINYEAFVKHIMSG 197
           ANGCINYEAFVKHIMSG
Sbjct: 181 ANGCINYEAFVKHIMSG 197


>gi|50845428 atrial/embryonic alkali myosin light chain [Homo
           sapiens]
          Length = 197

 Score =  400 bits (1027), Expect = e-112
 Identities = 197/197 (100%), Positives = 197/197 (100%)

Query: 1   MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAF 60
           MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAF
Sbjct: 1   MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAF 60

Query: 61  SLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPIL 120
           SLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPIL
Sbjct: 61  SLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPIL 120

Query: 121 QHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQED 180
           QHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQED
Sbjct: 121 QHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQED 180

Query: 181 ANGCINYEAFVKHIMSG 197
           ANGCINYEAFVKHIMSG
Sbjct: 181 ANGCINYEAFVKHIMSG 197


>gi|4557777 slow skeletal ventricular myosin alkali light chain 3
           [Homo sapiens]
          Length = 195

 Score =  320 bits (821), Expect = 4e-88
 Identities = 157/196 (80%), Positives = 172/196 (87%), Gaps = 2/196 (1%)

Query: 1   MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAF 60
           MAPKKPEPKK+ AK AP  APAPAP P P  E PKE  FD   +KI+FT +QIEEFKEAF
Sbjct: 1   MAPKKPEPKKDDAKAAPKAAPAPAPPPEP--ERPKEVEFDASKIKIEFTPEQIEEFKEAF 58

Query: 61  SLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPIL 120
            LFDRTP  EMKITYGQCGDVLRALGQNPT AEVLRVLGKP+ EE+N KM+DFETFLP+L
Sbjct: 59  MLFDRTPKCEMKITYGQCGDVLRALGQNPTQAEVLRVLGKPRQEELNTKMMDFETFLPML 118

Query: 121 QHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQED 180
           QHIS+NK+ GTYEDFVEGLRVFDKE NGTVMGAELRHVLATLGE++TE EVE+L+AGQED
Sbjct: 119 QHISKNKDTGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGERLTEDEVEKLMAGQED 178

Query: 181 ANGCINYEAFVKHIMS 196
           +NGCINYEAFVKHIMS
Sbjct: 179 SNGCINYEAFVKHIMS 194


>gi|17986273 fast skeletal myosin alkali light chain 1 isoform 1f
           [Homo sapiens]
          Length = 194

 Score =  275 bits (704), Expect = 1e-74
 Identities = 141/196 (71%), Positives = 158/196 (80%), Gaps = 3/196 (1%)

Query: 1   MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAF 60
           MAPKK + KK  A  A APAPAPAPAPAPAP  PKE   D  ++KI+F+ +Q +EFKEAF
Sbjct: 1   MAPKK-DVKKPVAAAAAAPAPAPAPAPAPAPAKPKEEKIDLSAIKIEFSKEQQDEFKEAF 59

Query: 61  SLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPIL 120
            LFDRT  G+ KIT  Q GDVLRALG NPTNAEV +VLG P  EE+N K ++FE FLP++
Sbjct: 60  LLFDRT--GDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIEFEQFLPMM 117

Query: 121 QHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQED 180
           Q IS NK+Q TYEDFVEGLRVFDKE NGTVMGAELRHVLATLGEKM E EVE L+AGQED
Sbjct: 118 QAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVEALMAGQED 177

Query: 181 ANGCINYEAFVKHIMS 196
           +NGCINYEAFVKHIMS
Sbjct: 178 SNGCINYEAFVKHIMS 193


>gi|4505303 smooth muscle and non-muscle myosin alkali light chain
           6B [Homo sapiens]
          Length = 208

 Score =  251 bits (641), Expect = 3e-67
 Identities = 129/199 (64%), Positives = 151/199 (75%), Gaps = 8/199 (4%)

Query: 3   PKKPEPKKEAAKPAPAPAPAPA-----PAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFK 57
           P  P   K AAKPA A AP PA     PA   AP+  +EP  D   V I+F  DQ+EEFK
Sbjct: 12  PAGPSISKPAAKPAAAGAP-PAKTKAEPAVPQAPQKTQEPPVDLSKVVIEFNKDQLEEFK 70

Query: 58  EAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFL 117
           EAF LFDR   G+ KI Y QCGDV+RALGQNPTNAEVL+VLG PK +E+  + +DFETFL
Sbjct: 71  EAFELFDRV--GDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFL 128

Query: 118 PILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAG 177
           P+LQ +++N+ QGTYED++EG RVFDKE NG VMGAELRHVL TLGEKMTE EVE +LAG
Sbjct: 129 PMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG 188

Query: 178 QEDANGCINYEAFVKHIMS 196
            ED+NGCINYEAF+KHI+S
Sbjct: 189 HEDSNGCINYEAFLKHILS 207


>gi|17986258 myosin, light chain 6, alkali, smooth muscle and
           non-muscle isoform 1 [Homo sapiens]
          Length = 151

 Score =  242 bits (618), Expect = 1e-64
 Identities = 117/151 (77%), Positives = 133/151 (88%), Gaps = 2/151 (1%)

Query: 47  DFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEM 106
           DFT DQ  EFKEAF LFDRT  G+ KI Y QCGDV+RALGQNPTNAEVL+VLG PK +EM
Sbjct: 3   DFTEDQTAEFKEAFQLFDRT--GDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEM 60

Query: 107 NVKMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKM 166
           NVK+LDFE FLP+LQ +++NK+QGTYED+VEGLRVFDKE NGTVMGAE+RHVL TLGEKM
Sbjct: 61  NVKVLDFEHFLPMLQTVAKNKDQGTYEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKM 120

Query: 167 TEAEVEQLLAGQEDANGCINYEAFVKHIMSG 197
           TE EVE L+AG ED+NGCINYEAFV+HI+SG
Sbjct: 121 TEEEVEMLVAGHEDSNGCINYEAFVRHILSG 151


>gi|88999583 myosin, light chain 6, alkali, smooth muscle and
           non-muscle isoform 2 [Homo sapiens]
          Length = 151

 Score =  233 bits (593), Expect = 1e-61
 Identities = 112/151 (74%), Positives = 130/151 (86%), Gaps = 2/151 (1%)

Query: 47  DFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEM 106
           DFT DQ  EFKEAF LFDRT  G+ KI Y QCGDV+RALGQNPTNAEVL+VLG PK +EM
Sbjct: 3   DFTEDQTAEFKEAFQLFDRT--GDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEM 60

Query: 107 NVKMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKM 166
           NVK+LDFE FLP+LQ +++NK+QGTYED+VEGLRVFDKE NGTVMGAE+RHVL TLGEKM
Sbjct: 61  NVKVLDFEHFLPMLQTVAKNKDQGTYEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKM 120

Query: 167 TEAEVEQLLAGQEDANGCINYEAFVKHIMSG 197
           TE EVE L+AG ED+NGCINYE  V+ +++G
Sbjct: 121 TEEEVEMLVAGHEDSNGCINYEELVRMVLNG 151


>gi|17986275 fast skeletal myosin alkali light chain 1 isoform 3f
           [Homo sapiens]
          Length = 150

 Score =  228 bits (582), Expect = 2e-60
 Identities = 115/151 (76%), Positives = 127/151 (84%), Gaps = 2/151 (1%)

Query: 46  IDFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEE 105
           + F+ADQI EFKEAF LFDRT  G+ KIT  Q GDVLRALG NPTNAEV +VLG P  EE
Sbjct: 1   MSFSADQIAEFKEAFLLFDRT--GDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEE 58

Query: 106 MNVKMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEK 165
           +N K ++FE FLP++Q IS NK+Q TYEDFVEGLRVFDKE NGTVMGAELRHVLATLGEK
Sbjct: 59  LNAKKIEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEK 118

Query: 166 MTEAEVEQLLAGQEDANGCINYEAFVKHIMS 196
           M E EVE L+AGQED+NGCINYEAFVKHIMS
Sbjct: 119 MKEEEVEALMAGQEDSNGCINYEAFVKHIMS 149


>gi|58218968 calmodulin 3 [Homo sapiens]
          Length = 149

 Score =  108 bits (271), Expect = 2e-24
 Identities = 61/145 (42%), Positives = 92/145 (63%), Gaps = 7/145 (4%)

Query: 49  TADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNV 108
           T +QI EFKEAFSLFD+   G+  IT  + G V+R+LGQNPT AE+  ++ +   +    
Sbjct: 6   TEEQIAEFKEAFSLFDKD--GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63

Query: 109 KMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTE 168
             +DF  FL ++    + K+  + E+  E  RVFDK+ NG +  AELRHV+  LGEK+T+
Sbjct: 64  --IDFPEFLTMMAR--KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 119

Query: 169 AEVEQLLAGQE-DANGCINYEAFVK 192
            EV++++   + D +G +NYE FV+
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQ 144


>gi|4502549 calmodulin 2 [Homo sapiens]
          Length = 149

 Score =  108 bits (271), Expect = 2e-24
 Identities = 61/145 (42%), Positives = 92/145 (63%), Gaps = 7/145 (4%)

Query: 49  TADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNV 108
           T +QI EFKEAFSLFD+   G+  IT  + G V+R+LGQNPT AE+  ++ +   +    
Sbjct: 6   TEEQIAEFKEAFSLFDKD--GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63

Query: 109 KMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTE 168
             +DF  FL ++    + K+  + E+  E  RVFDK+ NG +  AELRHV+  LGEK+T+
Sbjct: 64  --IDFPEFLTMMAR--KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 119

Query: 169 AEVEQLLAGQE-DANGCINYEAFVK 192
            EV++++   + D +G +NYE FV+
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQ 144


>gi|5901912 calmodulin 1 [Homo sapiens]
          Length = 149

 Score =  108 bits (271), Expect = 2e-24
 Identities = 61/145 (42%), Positives = 92/145 (63%), Gaps = 7/145 (4%)

Query: 49  TADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNV 108
           T +QI EFKEAFSLFD+   G+  IT  + G V+R+LGQNPT AE+  ++ +   +    
Sbjct: 6   TEEQIAEFKEAFSLFDKD--GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63

Query: 109 KMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTE 168
             +DF  FL ++    + K+  + E+  E  RVFDK+ NG +  AELRHV+  LGEK+T+
Sbjct: 64  --IDFPEFLTMMAR--KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 119

Query: 169 AEVEQLLAGQE-DANGCINYEAFVK 192
            EV++++   + D +G +NYE FV+
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQ 144


>gi|4885111 calmodulin-like 3 [Homo sapiens]
          Length = 149

 Score =  108 bits (269), Expect = 4e-24
 Identities = 62/149 (41%), Positives = 94/149 (63%), Gaps = 7/149 (4%)

Query: 49  TADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNV 108
           T +Q+ EFKEAFSLFD+   G+  IT  + G V+R+LGQNPT AE+  ++ +   +    
Sbjct: 6   TEEQVTEFKEAFSLFDKD--GDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGT 63

Query: 109 KMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTE 168
             +DF  FL ++    + K+    E+  E  RVFDK+ NG V  AELRHV+  LGEK+++
Sbjct: 64  --VDFPEFLGMMAR--KMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSD 119

Query: 169 AEVEQLL-AGQEDANGCINYEAFVKHIMS 196
            EV++++ A   D +G +NYE FV+ ++S
Sbjct: 120 EEVDEMIRAADTDGDGQVNYEEFVRVLVS 148


>gi|110227594 calmodulin-like 4 isoform 1 [Homo sapiens]
          Length = 196

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 8/155 (5%)

Query: 41  PKSVKIDFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGK 100
           P+  K   + DQI E+KE FSL+D+   G++K T       +R LG +PT  EV R L  
Sbjct: 42  PRMAKF-LSQDQINEYKECFSLYDKQQRGKIKAT--DLMVAMRCLGASPTPGEVQRHLQT 98

Query: 101 PKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLA 160
              +      LDF TFL I+    + K++   ++ +  + + DKE  G VM ++LR  L 
Sbjct: 99  HGIDGNGE--LDFSTFLTIMH--MQIKQEDPKKEILLAMLMVDKEKKGYVMASDLRSKLT 154

Query: 161 TLGEKMTEAEVEQLLAGQE-DANGCINYEAFVKHI 194
           +LGEK+T  EV+ L    + + NG + Y+ F+  I
Sbjct: 155 SLGEKLTHKEVDDLFREADIEPNGKVKYDEFIHKI 189


>gi|4507617 fast skeletal muscle troponin C [Homo sapiens]
          Length = 160

 Score = 74.3 bits (181), Expect = 6e-14
 Identities = 44/144 (30%), Positives = 80/144 (55%), Gaps = 6/144 (4%)

Query: 51  DQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKM 110
           + I EFK AF +FD    G++ +   + G V+R LGQ PT  E+  ++   + +E     
Sbjct: 15  EMIAEFKAAFDMFDADGGGDISVK--ELGTVMRMLGQTPTKEELDAII--EEVDEDGSGT 70

Query: 111 LDFETFLPILQHISRNKEQG-TYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEA 169
           +DFE FL ++    +   +G + E+  E  R+FD+ ++G +   EL  +    GE +T+ 
Sbjct: 71  IDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHVTDE 130

Query: 170 EVEQLLA-GQEDANGCINYEAFVK 192
           E+E L+  G ++ +G I+++ F+K
Sbjct: 131 EIESLMKDGDKNNDGRIDFDEFLK 154



 Score = 33.5 bits (75), Expect = 0.12
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 42  KSVKIDFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKP 101
           + +K D      EE  E F +FDR   G   I   +  ++ RA G++ T+ E+  ++   
Sbjct: 82  RQMKEDAKGKSEEELAECFRIFDRNADG--YIDPEELAEIFRASGEHVTDEEIESLM--K 137

Query: 102 KPEEMNVKMLDFETFLPILQHI 123
             ++ N   +DF+ FL +++ +
Sbjct: 138 DGDKNNDGRIDFDEFLKMMEGV 159


>gi|4507615 troponin C, slow [Homo sapiens]
          Length = 161

 Score = 69.3 bits (168), Expect = 2e-12
 Identities = 47/153 (30%), Positives = 86/153 (56%), Gaps = 5/153 (3%)

Query: 42  KSVKIDFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKP 101
           K+     T +Q  EFK AF +F      +  I+  + G V+R LGQNPT  E+  ++ + 
Sbjct: 6   KAAVEQLTEEQKNEFKAAFDIFV-LGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEV 64

Query: 102 KPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFVEGL-RVFDKESNGTVMGAELRHVLA 160
             +E     +DF+ FL ++    ++  +G  E+ +  L R+FDK ++G +   EL+ +L 
Sbjct: 65  --DEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQ 122

Query: 161 TLGEKMTEAEVEQLLA-GQEDANGCINYEAFVK 192
             GE +TE ++E+L+  G ++ +G I+Y+ F++
Sbjct: 123 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155


>gi|50897266 calmodulin-like 6 [Homo sapiens]
          Length = 181

 Score = 68.6 bits (166), Expect = 3e-12
 Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 6/144 (4%)

Query: 49  TADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNV 108
           +A+QI+E+K  F +FD    GE+K   G+   ++  LG NPT +E L  + K    + N 
Sbjct: 31  SAEQIKEYKGVFEMFDEEGNGEVKT--GELEWLMSLLGINPTKSE-LASMAKDVDRD-NK 86

Query: 109 KMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTE 168
              + + FL ++  +   K Q    +     RVFDKE  G +    L++VL   GE + E
Sbjct: 87  GFFNCDGFLALMG-VYHEKAQNQESELRAAFRVFDKEGKGYIDWNTLKYVLMNAGEPLNE 145

Query: 169 AEVEQLL-AGQEDANGCINYEAFV 191
            E EQ++    +D +  I+YE FV
Sbjct: 146 VEAEQMMKEADKDGDRTIDYEEFV 169


>gi|4757974 centrin 1 [Homo sapiens]
          Length = 172

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 7/149 (4%)

Query: 45  KIDFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPE 104
           K + T DQ +E +EAF LFD   +G   I   +    +RALG  P   E+ +++ +   E
Sbjct: 22  KPELTEDQKQEVREAFDLFDVDGSGT--IDAKELKVAMRALGFEPRKEEMKKMISEVDRE 79

Query: 105 EMNVKMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGE 164
                 + F  FL ++    +  E+ T E+ ++  R+FD +  G +    L+ V   LGE
Sbjct: 80  --GTGKISFNDFLAVMTQ--KMSEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELGE 135

Query: 165 KMTEAEVEQLL-AGQEDANGCINYEAFVK 192
            +T+ E+++++     D +G +N E F++
Sbjct: 136 NLTDEELQEMIDEADRDGDGEVNEEEFLR 164


>gi|4757902 caltractin [Homo sapiens]
          Length = 172

 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 39/151 (25%), Positives = 79/151 (52%), Gaps = 7/151 (4%)

Query: 43  SVKIDFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPK 102
           S K + T +Q +E +EAF LFD   TG + +   +    +RALG  P   E+ +++ +  
Sbjct: 20  SPKPELTEEQKQEIREAFDLFDADGTGTIDVK--ELKVAMRALGFEPKKEEIKKMISEID 77

Query: 103 PEEMNVKMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATL 162
            E      ++F  FL ++    +  E+ T E+ ++  ++FD +  G +    L+ V   L
Sbjct: 78  KE--GTGKMNFGDFLTVMTQ--KMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKEL 133

Query: 163 GEKMTEAEVEQLL-AGQEDANGCINYEAFVK 192
           GE +T+ E+++++     D +G ++ + F++
Sbjct: 134 GENLTDEELQEMIDEADRDGDGEVSEQEFLR 164


>gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo
           sapiens]
          Length = 172

 Score = 64.3 bits (155), Expect = 6e-11
 Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 17/167 (10%)

Query: 35  KEPAFDPKSVKIDFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEV 94
           K P     +V   F   QI+EFKEAF++ D+   G   I      D+L +LG+NPT+A +
Sbjct: 13  KRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGF--IDKEDLHDMLASLGKNPTDAYL 70

Query: 95  LRVLGK-PKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFV--EGLRVFDKESNGTVM 151
             ++ + P P       ++F  FL +       K  GT  + V       FD+E+ GT+ 
Sbjct: 71  DAMMNEAPGP-------INFTMFLTMFGE----KLNGTDPEDVIRNAFACFDEEATGTIQ 119

Query: 152 GAELRHVLATLGEKMTEAEVEQLL-AGQEDANGCINYEAFVKHIMSG 197
              LR +L T+G++ T+ EV++L      D  G  NY  F + +  G
Sbjct: 120 EDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHG 166


>gi|222144324 myosin regulatory light chain MRCL2 isoform A [Homo
           sapiens]
          Length = 172

 Score = 64.3 bits (155), Expect = 6e-11
 Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 17/167 (10%)

Query: 35  KEPAFDPKSVKIDFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEV 94
           K P     +V   F   QI+EFKEAF++ D+   G   I      D+L +LG+NPT+A +
Sbjct: 13  KRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGF--IDKEDLHDMLASLGKNPTDAYL 70

Query: 95  LRVLGK-PKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFV--EGLRVFDKESNGTVM 151
             ++ + P P       ++F  FL +       K  GT  + V       FD+E+ GT+ 
Sbjct: 71  DAMMNEAPGP-------INFTMFLTMFGE----KLNGTDPEDVIRNAFACFDEEATGTIQ 119

Query: 152 GAELRHVLATLGEKMTEAEVEQLL-AGQEDANGCINYEAFVKHIMSG 197
              LR +L T+G++ T+ EV++L      D  G  NY  F + +  G
Sbjct: 120 EDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHG 166


>gi|15809016 myosin regulatory light chain MRCL2 isoform A [Homo
           sapiens]
          Length = 172

 Score = 64.3 bits (155), Expect = 6e-11
 Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 17/167 (10%)

Query: 35  KEPAFDPKSVKIDFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEV 94
           K P     +V   F   QI+EFKEAF++ D+   G   I      D+L +LG+NPT+A +
Sbjct: 13  KRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGF--IDKEDLHDMLASLGKNPTDAYL 70

Query: 95  LRVLGK-PKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFV--EGLRVFDKESNGTVM 151
             ++ + P P       ++F  FL +       K  GT  + V       FD+E+ GT+ 
Sbjct: 71  DAMMNEAPGP-------INFTMFLTMFGE----KLNGTDPEDVIRNAFACFDEEATGTIQ 119

Query: 152 GAELRHVLATLGEKMTEAEVEQLL-AGQEDANGCINYEAFVKHIMSG 197
              LR +L T+G++ T+ EV++L      D  G  NY  F + +  G
Sbjct: 120 EDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHG 166


>gi|5453740 myosin, light chain 12A, regulatory, non-sarcomeric
           [Homo sapiens]
          Length = 171

 Score = 63.9 bits (154), Expect = 8e-11
 Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 15/166 (9%)

Query: 35  KEPAFDPKSVKIDFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEV 94
           K P     +V   F   QI+EFKEAF++ D+   G   I      D+L +LG+NPT+ E 
Sbjct: 12  KRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGF--IDKEDLHDMLASLGKNPTD-EY 68

Query: 95  LRVLGKPKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFV--EGLRVFDKESNGTVMG 152
           L  +    P  +N     F  FL +       K  GT  + V       FD+E+ GT+  
Sbjct: 69  LDAMMNEAPGPIN-----FTMFLTMFGE----KLNGTDPEDVIRNAFACFDEEATGTIQE 119

Query: 153 AELRHVLATLGEKMTEAEVEQLL-AGQEDANGCINYEAFVKHIMSG 197
             LR +L T+G++ T+ EV++L      D  G  NY  F + +  G
Sbjct: 120 DYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHG 165


>gi|222144328 myosin regulatory light chain MRCL2 isoform B [Homo
           sapiens]
          Length = 154

 Score = 63.2 bits (152), Expect = 1e-10
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 17/154 (11%)

Query: 48  FTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGK-PKPEEM 106
           F   QI+EFKEAF++ D+   G   I      D+L +LG+NPT+A +  ++ + P P   
Sbjct: 8   FDQSQIQEFKEAFNMIDQNRDGF--IDKEDLHDMLASLGKNPTDAYLDAMMNEAPGP--- 62

Query: 107 NVKMLDFETFLPILQHISRNKEQGTYEDFV--EGLRVFDKESNGTVMGAELRHVLATLGE 164
               ++F  FL +       K  GT  + V       FD+E+ GT+    LR +L T+G+
Sbjct: 63  ----INFTMFLTMFGE----KLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGD 114

Query: 165 KMTEAEVEQLL-AGQEDANGCINYEAFVKHIMSG 197
           + T+ EV++L      D  G  NY  F + +  G
Sbjct: 115 RFTDEEVDELYREAPIDKKGNFNYIEFTRILKHG 148


>gi|169167243 PREDICTED: similar to myosin regulatory light chain
           MRCL2 [Homo sapiens]
          Length = 377

 Score = 62.4 bits (150), Expect = 2e-10
 Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 13/165 (7%)

Query: 35  KEPAFDPKSVKIDFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEV 94
           K P      V   F   QI+EFKEAF++ D+   G   I+      +L +LG+NPT+A +
Sbjct: 218 KRPQCATSKVFATFDQSQIQEFKEAFNMIDQNRDGF--ISKEDLHGMLASLGKNPTDACL 275

Query: 95  LRVLGKPKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFVEG-LRVFDKESNGTVMGA 153
             V+ +  P  +N  ML        L    +       ED +      FD+E+ GT+   
Sbjct: 276 DAVMNEA-PGPINFTML--------LAMFGKKLNGTDPEDVIRNAFACFDEEATGTIQED 326

Query: 154 ELRHVLATLGEKMTEAEVEQLLA-GQEDANGCINYEAFVKHIMSG 197
            LR +L T+G++ T+ EV++L      D  G  NY  F   +  G
Sbjct: 327 YLRELLTTVGDQFTDEEVDELYTEASIDKKGNFNYIEFTSILKHG 371


>gi|29568111 myosin regulatory light chain 9 isoform a [Homo
           sapiens]
          Length = 172

 Score = 62.4 bits (150), Expect = 2e-10
 Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 15/173 (8%)

Query: 28  APAPEAPKEPAFDPKSVKIDFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQ 87
           A A    K P     +V   F   QI+EFKEAF++ D+   G   I      D+L +LG+
Sbjct: 6   AKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGF--IDKEDLHDMLASLGK 63

Query: 88  NPTNAEVLRVLGKPKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFV--EGLRVFDKE 145
           NPT+ E L  +    P  +N     F  FL +       K  GT  + V       FD+E
Sbjct: 64  NPTD-EYLEGMMSEAPGPIN-----FTMFLTMFGE----KLNGTDPEDVIRNAFACFDEE 113

Query: 146 SNGTVMGAELRHVLATLGEKMTEAEVEQLL-AGQEDANGCINYEAFVKHIMSG 197
           ++G +    LR +L T+G++ T+ EV+++      D  G  NY  F + +  G
Sbjct: 114 ASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHG 166


>gi|88981341 PREDICTED: similar to myosin regulatory light chain
           MRCL2 [Homo sapiens]
          Length = 377

 Score = 62.0 bits (149), Expect = 3e-10
 Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 13/165 (7%)

Query: 35  KEPAFDPKSVKIDFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEV 94
           K P      V   F   QI+EFKEAF++ D+   G   I+      +L +LG+NPT+A +
Sbjct: 218 KRPQCATSKVFATFDQSQIQEFKEAFNMIDQNRDGF--ISKEDLHGMLASLGKNPTDACL 275

Query: 95  LRVLGKPKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFVEG-LRVFDKESNGTVMGA 153
             V+ +  P  +N  ML        L    +       ED +      FD+E+ GT+   
Sbjct: 276 DAVMNEA-PGPINFTML--------LAMFGKKLNGTDPEDVIRNAFACFDEEATGTIQED 326

Query: 154 ELRHVLATLGEKMTEAEVEQLLA-GQEDANGCINYEAFVKHIMSG 197
            LR +L T+G++ T+ EV++L      D  G  NY  F   +  G
Sbjct: 327 YLRELLTTVGDQFTDEEVDELYTEAPIDKKGNFNYIEFTSILKHG 371


>gi|51464364 PREDICTED: similar to myosin regulatory light chain
           MRCL2 [Homo sapiens]
          Length = 377

 Score = 62.0 bits (149), Expect = 3e-10
 Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 13/165 (7%)

Query: 35  KEPAFDPKSVKIDFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEV 94
           K P      V   F   QI+EFKEAF++ D+   G   I+      +L +LG+NPT+A +
Sbjct: 218 KRPQCATSKVFATFDQSQIQEFKEAFNMIDQNRDGF--ISKEDLHGMLASLGKNPTDACL 275

Query: 95  LRVLGKPKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFVEG-LRVFDKESNGTVMGA 153
             V+ +  P  +N  ML        L    +       ED +      FD+E+ GT+   
Sbjct: 276 DAVMNEA-PGPINFTML--------LAMFGKKLNGTDPEDVIRNAFACFDEEATGTIQED 326

Query: 154 ELRHVLATLGEKMTEAEVEQLLA-GQEDANGCINYEAFVKHIMSG 197
            LR +L T+G++ T+ EV++L      D  G  NY  F   +  G
Sbjct: 327 YLRELLTTVGDQFTDEEVDELYTEAPIDKKGNFNYIEFTSILKHG 371


>gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens]
          Length = 220

 Score = 62.0 bits (149), Expect = 3e-10
 Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 24/195 (12%)

Query: 15  PAPAPAPAPAPAPAPAPEAPK-------------EPAFDPKSVKIDFTADQIEEFKEAFS 61
           P+P+ +P     PAP  +                 P+     +  +   ++IEE + AF 
Sbjct: 29  PSPSSSPKEQGDPAPGVQGYSVLNSLVGPACIFLRPSIAATQLDRELRPEEIEELQVAFQ 88

Query: 62  LFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPIL- 120
            FDR   G   I   + G  +R LG  PT  E++ +      ++++   +DFE F+ ++ 
Sbjct: 89  EFDRDRDG--YIGCRELGACMRTLGYMPTEMELIEI-----SQQISGGKVDFEDFVELMG 141

Query: 121 -QHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVL-ATLGEKMTEAEVEQLLAGQ 178
            + ++   +     +  +  R FD   +G +   ELR  L A LGE++++ EV+++L   
Sbjct: 142 PKLLAETADMIGVRELRDAFREFDTNGDGRISVGELRAALKALLGERLSQREVDEILQDV 201

Query: 179 E-DANGCINYEAFVK 192
           + + +G +++E FV+
Sbjct: 202 DLNGDGLVDFEEFVR 216


>gi|46397403 centrin 3 [Homo sapiens]
          Length = 167

 Score = 60.5 bits (145), Expect = 9e-10
 Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 8/152 (5%)

Query: 47  DFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEM 106
           + + +Q +E K+AF LFD     +  I Y +    +RALG +   A+VL++L K    E 
Sbjct: 21  ELSEEQKQEIKDAFELFDTDK--DEAIDYHELKVAMRALGFDVKKADVLKIL-KDYDREA 77

Query: 107 NVKMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKM 166
             K + FE F  ++       E+  +E+ ++  ++FD + +G +    LR V   LGE M
Sbjct: 78  TGK-ITFEDFNEVVTDWIL--ERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENM 134

Query: 167 TEAEVEQLLAG-QEDANGCINYEAFVKHIMSG 197
           ++ E+  ++    +D +G IN E F+  IM+G
Sbjct: 135 SDEELRAMIEEFDKDGDGEINQEEFIA-IMTG 165


>gi|21624641 calcium binding protein 4 [Homo sapiens]
          Length = 275

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 39/217 (17%)

Query: 3   PKKPEPKKEAAKPAPAPAPAPAPAPAPA---------PEAPKEPA---FDPKSVKI---- 46
           P+ P            PA AP  +P PA         P++  + A   + P   ++    
Sbjct: 64  PEAPGSSNNPPSTGEGPAGAPPASPGPASSRQSHRHRPDSLHDAAQRTYGPLLNRVFGKD 123

Query: 47  -DFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEE 105
            +   ++++E + AF  FD    G   I++ + GD +R LG  PT  E+L V        
Sbjct: 124 RELGPEELDELQAAFEEFDTDRDGY--ISHRELGDCMRTLGYMPTEMELLEV-------S 174

Query: 106 MNVKM-----LDFETFLPILQHISRNKEQGTYEDFVEGLRV----FDKESNGTVMGAELR 156
            ++KM     +DFE F+ ++    + +E+  +   V  LR+    FD++ +G +  AELR
Sbjct: 175 QHIKMRMGGRVDFEEFVELIG--PKLREETAHMLGVRELRIAFREFDRDRDGRITVAELR 232

Query: 157 H-VLATLGEKMTEAEVEQLLAGQE-DANGCINYEAFV 191
             V A LGE +   E++++L   + + +G ++++ FV
Sbjct: 233 EAVPALLGEPLAGPELDEMLREVDLNGDGTVDFDEFV 269


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.132    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,883,793
Number of Sequences: 37866
Number of extensions: 540049
Number of successful extensions: 20645
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 364
Number of HSP's that attempted gapping in prelim test: 9063
Number of HSP's gapped (non-prelim): 7828
length of query: 197
length of database: 18,247,518
effective HSP length: 97
effective length of query: 100
effective length of database: 14,574,516
effective search space: 1457451600
effective search space used: 1457451600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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