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Search of human proteins with 50345831
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|50345831 forkhead box J3 [Homo sapiens]
(622 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|50345831 forkhead box J3 [Homo sapiens] 1291 0.0
gi|8923842 forkhead box J2 [Homo sapiens] 346 3e-95
gi|4885237 forkhead box C2 [Homo sapiens] 134 3e-31
gi|21618327 forkhead box I1 isoform a [Homo sapiens] 127 4e-29
gi|32307177 forkhead box G1 [Homo sapiens] 124 2e-28
gi|208431824 forkhead box I3 [Homo sapiens] 124 3e-28
gi|195947376 forkhead box I2 [Homo sapiens] 123 6e-28
gi|50301236 forkhead box J1 [Homo sapiens] 122 1e-27
gi|24497504 forkhead box A2 isoform 2 [Homo sapiens] 119 6e-27
gi|194394143 forkhead box A2 isoform 1 [Homo sapiens] 119 6e-27
gi|24497506 forkhead box A3 [Homo sapiens] 119 1e-26
gi|31563338 forkhead box K2 [Homo sapiens] 118 1e-26
gi|119395716 forkhead box C1 [Homo sapiens] 118 2e-26
gi|24497501 forkhead box A1 [Homo sapiens] 117 3e-26
gi|110735445 forkhead box F1 [Homo sapiens] 116 7e-26
gi|105554437 forkhead box B1 [Homo sapiens] 115 9e-26
gi|134142824 forkhead box D2 [Homo sapiens] 114 3e-25
gi|4758392 forkhead box D1 [Homo sapiens] 114 3e-25
gi|4557595 forkhead box F2 [Homo sapiens] 113 5e-25
gi|22779860 forkhead box L1 [Homo sapiens] 113 6e-25
gi|82546824 forkhead box K1 [Homo sapiens] 113 6e-25
gi|6912372 forkhead box D3 [Homo sapiens] 112 1e-24
gi|21618325 forkhead box E1 [Homo sapiens] 111 2e-24
gi|61966923 forkhead box B2 [Homo sapiens] 108 2e-23
gi|18959276 forkhead box D4-like 1 [Homo sapiens] 107 3e-23
gi|28973785 forkhead box S1 [Homo sapiens] 107 3e-23
gi|40549454 T-cell leukemia virus enhancer factor [Homo sapiens] 107 4e-23
gi|157042770 forkhead box D4-like 3 [Homo sapiens] 106 7e-23
gi|21618329 forkhead box I1 isoform b [Homo sapiens] 106 7e-23
gi|149944560 forkhead box D4-like 2 [Homo sapiens] 106 7e-23
>gi|50345831 forkhead box J3 [Homo sapiens]
Length = 622
Score = 1291 bits (3340), Expect = 0.0
Identities = 622/622 (100%), Positives = 622/622 (100%)
Query: 1 MGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGISKKNALL 60
MGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGISKKNALL
Sbjct: 1 MGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGISKKNALL 60
Query: 61 DPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGS 120
DPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGS
Sbjct: 61 DPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGS 120
Query: 121 GWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDVLPTRPKKRARSVERASTP 180
GWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDVLPTRPKKRARSVERASTP
Sbjct: 121 GWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDVLPTRPKKRARSVERASTP 180
Query: 181 YSIDSDSLGMECIISGSASPTLAINTVTNKVTLYNTDQDGSDSPRSSLNNSLSDQSLASV 240
YSIDSDSLGMECIISGSASPTLAINTVTNKVTLYNTDQDGSDSPRSSLNNSLSDQSLASV
Sbjct: 181 YSIDSDSLGMECIISGSASPTLAINTVTNKVTLYNTDQDGSDSPRSSLNNSLSDQSLASV 240
Query: 241 NLNSVGSVHSYTPVTSHPESVSQSLTPQQQPQYNLPERDKQLLFSEYNFEDLSASFRSLY 300
NLNSVGSVHSYTPVTSHPESVSQSLTPQQQPQYNLPERDKQLLFSEYNFEDLSASFRSLY
Sbjct: 241 NLNSVGSVHSYTPVTSHPESVSQSLTPQQQPQYNLPERDKQLLFSEYNFEDLSASFRSLY 300
Query: 301 KSVFEQSLSQQGLMNIPSESSQQSHTSCTYQHSPSSTVSTHPHSNQSSLSNSHGSGLNTT 360
KSVFEQSLSQQGLMNIPSESSQQSHTSCTYQHSPSSTVSTHPHSNQSSLSNSHGSGLNTT
Sbjct: 301 KSVFEQSLSQQGLMNIPSESSQQSHTSCTYQHSPSSTVSTHPHSNQSSLSNSHGSGLNTT 360
Query: 361 GSNSVAQVSLSHPQMHTQPSPHPPHRPHGLPQHPQRSPHPAPHPQQHSQLQSPHPQHPSP 420
GSNSVAQVSLSHPQMHTQPSPHPPHRPHGLPQHPQRSPHPAPHPQQHSQLQSPHPQHPSP
Sbjct: 361 GSNSVAQVSLSHPQMHTQPSPHPPHRPHGLPQHPQRSPHPAPHPQQHSQLQSPHPQHPSP 420
Query: 421 HQHIQHHPNHQHQTLTHQAPPPPQQVSCNSGVSNDWYATLDMLKESCRIASSVNWSDVDL 480
HQHIQHHPNHQHQTLTHQAPPPPQQVSCNSGVSNDWYATLDMLKESCRIASSVNWSDVDL
Sbjct: 421 HQHIQHHPNHQHQTLTHQAPPPPQQVSCNSGVSNDWYATLDMLKESCRIASSVNWSDVDL 480
Query: 481 SQFQGLMESMRQADLKNWSLDQVQFADLCSSLNQFFTQTGLIHSQSNVQQNVCHGAMHPT 540
SQFQGLMESMRQADLKNWSLDQVQFADLCSSLNQFFTQTGLIHSQSNVQQNVCHGAMHPT
Sbjct: 481 SQFQGLMESMRQADLKNWSLDQVQFADLCSSLNQFFTQTGLIHSQSNVQQNVCHGAMHPT 540
Query: 541 KPSQHIGTGNLYIDSRQNLPPSVMPPPGYPHIPQALSTPGTTMAGHHRAMNQQHMMPSQA 600
KPSQHIGTGNLYIDSRQNLPPSVMPPPGYPHIPQALSTPGTTMAGHHRAMNQQHMMPSQA
Sbjct: 541 KPSQHIGTGNLYIDSRQNLPPSVMPPPGYPHIPQALSTPGTTMAGHHRAMNQQHMMPSQA 600
Query: 601 FQMRRSLPPDDIQDDFDWDSIV 622
FQMRRSLPPDDIQDDFDWDSIV
Sbjct: 601 FQMRRSLPPDDIQDDFDWDSIV 622
>gi|8923842 forkhead box J2 [Homo sapiens]
Length = 574
Score = 346 bits (888), Expect = 3e-95
Identities = 247/676 (36%), Positives = 323/676 (47%), Gaps = 173/676 (25%)
Query: 16 MTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGISKK---NALLDPNTTLDQEEVQ 72
M S+LESSLTS+DWLPQLT+RA I+K + A G S+K + DPN TL ++E
Sbjct: 1 MASDLESSLTSIDWLPQLTLRATIEKLGSASQAGPPGSSRKCSPGSPTDPNATLSKDEAA 60
Query: 73 QHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSL 132
H+DGKP YSYA+LIT+AINSSP KKMTLSEIY+WICDNFPYY+ AG GWKNSIRHNLSL
Sbjct: 61 VHQDGKPRYSYATLITYAINSSPAKKMTLSEIYRWICDNFPYYKNAGIGWKNSIRHNLSL 120
Query: 133 NKCFLKVPRSKDDPGKGSYWAIDTNPKEDVLPTRPKKRARSVERASTPYSIDSDSLGMEC 192
NKCF KVPR +DDPGKGSYW IDT P D+ S +R P D L +
Sbjct: 121 NKCFRKVPRPRDDPGKGSYWTIDTCP--DI----------SRKRRHPP----DDDLSQD- 163
Query: 193 IISGSASPTLAINTVTNKVTLYNTDQDGSDSPRSSL----NNSLSDQSLASVNLNSVGSV 248
+ +Q+ S SPR + SL + ++L S S+
Sbjct: 164 ----------------------SPEQEASKSPRGGVAGSGEASLPPEGNPQMSLQSPTSI 201
Query: 249 HSYTPVTSHPE--SVSQSLTPQQQ-----PQYNLPERDKQLLFSEYNFEDLSASFRSLYK 301
SY+ T + +V+ + ++ P YN D + +SE NF+DLS SFR+LYK
Sbjct: 202 ASYSQGTGSVDGGAVAAGASGRESAEGPPPLYN-TNHDFKFSYSEINFQDLSWSFRNLYK 260
Query: 302 SVFEQSLSQQGLMNIPSESSQQSHTSCTYQHSPSSTVSTHPHSNQSSLSNSHGSGLNTTG 361
S+ E+S S + QH SS + P SN
Sbjct: 261 SMLEKS-------------------SSSSQHGFSSLLGDIPPSN---------------- 285
Query: 362 SNSVAQVSLSHPQMHTQPSPHPPHRPHGLPQHPQRSPHPAPHPQQHSQLQSPH------- 414
+ M+ Q P PP + Q PQ P + QQ + Q P
Sbjct: 286 ----------NYYMYQQQQPPPPQQQQQQQQPPQPPPQQSQPQQQQAPAQGPSAVGGAPP 335
Query: 415 ----------------------------PQHPSPHQHIQHHPNHQHQTLTH--QAPPPPQ 444
HP P QH +HP HQH +H Q PPPPQ
Sbjct: 336 LHTPSTDGCTPPGGKQAGAEGYGPPPVMAMHPPPLQHGGYHP-HQHHPHSHPAQQPPPPQ 394
Query: 445 -QVSCNSGVSN-------DWYATLDMLKESCRIASSVNWSDVDLSQFQGLMESMRQADLK 496
Q + ++N DW + +D LKES ++ + +NWS ++ SQF LMES+RQA+ K
Sbjct: 395 PQAQGQAPINNTGFAFPSDWCSNIDSLKESFKMVNRLNWSSIEQSQFSELMESLRQAEQK 454
Query: 497 NWSLDQVQFADLCSSLNQFFTQTGLIHSQSNVQQNVCHGAMHPTKPSQHIGTGNLYIDSR 556
NW+LDQ A+LC SLN F TQTG + Q G P P++ I +
Sbjct: 455 NWTLDQHHIANLCDSLNHFLTQTGHVPPQG--------GTHRPPAPAR-IADSCALTSGK 505
Query: 557 QNLPPSVMPPPGYPHIPQALSTPG-------TTMAGHHRAMNQQHMMPSQAFQMRRSLPP 609
Q S + G+P P P AG++R + HM+P R S+PP
Sbjct: 506 QESAMSQVNSYGHPQAPHLYPGPSPMYPIPTQDSAGYNRPAH--HMVP------RPSVPP 557
Query: 610 ----DDIQDDFDWDSI 621
++I DDFDWD I
Sbjct: 558 PGANEEIPDDFDWDLI 573
>gi|4885237 forkhead box C2 [Homo sapiens]
Length = 501
Score = 134 bits (336), Expect = 3e-31
Identities = 110/390 (28%), Positives = 165/390 (42%), Gaps = 63/390 (16%)
Query: 78 KPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFL 137
KPPYSY +LIT AI ++P+KK+TL+ IYQ+I D FP+YRE GW+NSIRHNLSLN+CF+
Sbjct: 72 KPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 131
Query: 138 KVPRSKDDPGKGSYWAIDTN-----------------PKEDVLPTRPKKR-------ARS 173
KVPR PGKGSYW +D + K+DV + ++ A S
Sbjct: 132 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEKEERAHLKEPPPAAS 191
Query: 174 VERASTPYSIDSDSLGMECII--SGSASPTL----AINTVTNKVTLYNTDQDGSDSPRSS 227
+TP+ D+ + ++ S +ASP L + T++ + L + + + +P S
Sbjct: 192 KGAPATPHLADAPKEAEKKVVIKSEAASPALPVITKVETLSPESALQGSPRSAASTPAGS 251
Query: 228 LNNSLSDQSLASVNLNSVGSVHSYTPVTSHPESVSQS---------LTPQQQPQYNLPER 278
+ SL + A+ N SV + + + P S + P P P
Sbjct: 252 PDGSLPEHHAAAPNGLPGFSVENIMTLRTSPPGGELSPGAGRAGLVVPPLALPYAAAP-- 309
Query: 279 DKQLLFSEYNFEDLSASFRSLYKSVFEQSLSQQGLMNIPSESSQQSHTSCTYQHSPSSTV 338
+ + + L A Y+ M++ + + + +H + +
Sbjct: 310 --PAAYGQPCAQGLEAGAAGGYQ-------CSMRAMSLYTGAERPAH--MCVPPALDEAL 358
Query: 339 STHPHSNQSSLSNSHGSGLNTTGSNSVAQVSLSHPQMHTQPSPHPPHRPHGLPQHPQRSP 398
S HP S L S LN A + H H H H P P P P
Sbjct: 359 SDHPSGPTSPL-----SALNLAAGQEGALAATGHHHQH-----HGHHHPQAPPPPPAPQP 408
Query: 399 HPAPHP-QQHSQLQSPHPQHPSPHQHIQHH 427
P P P +Q S + H H+ H
Sbjct: 409 QPTPQPGAAAAQAASWYLNHSGDLNHLPGH 438
>gi|21618327 forkhead box I1 isoform a [Homo sapiens]
Length = 378
Score = 127 bits (318), Expect = 4e-29
Identities = 81/204 (39%), Positives = 120/204 (58%), Gaps = 14/204 (6%)
Query: 68 QEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIR 127
QEE+ K +PPYSY++LI AI+ +P K++TLS+IYQ++ DNFP+Y ++ +GW+NSIR
Sbjct: 115 QEELM--KLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIR 172
Query: 128 HNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKE--DVLPTRPKKRARSVERASTPYSIDS 185
HNLSLN CF KVPR +DDPGKG+YW +D N ++ D R K++ +S +ST
Sbjct: 173 HNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSDVSSSTA----- 227
Query: 186 DSLGMECIISGSASPTLAINTVTNKVTLYNTDQDG-SDSPRSSLNNSLSDQSLASVNLNS 244
SL +E + S+ P + T + L G + SP + S + L+S
Sbjct: 228 -SLALE--KTESSLPVDSPKTTEPQDILDGASPGGTTSSPEKRPSPPPSGAPCLNSFLSS 284
Query: 245 VGSVHSYTPVTSHPESVSQSLTPQ 268
+ + S TSHP V+ L+P+
Sbjct: 285 MTAYVSGGSPTSHP-LVTPGLSPE 307
>gi|32307177 forkhead box G1 [Homo sapiens]
Length = 489
Score = 124 bits (312), Expect = 2e-28
Identities = 109/315 (34%), Positives = 149/315 (47%), Gaps = 35/315 (11%)
Query: 70 EVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHN 129
E + K KPP+SY +LI AI SP+K++TL+ IY++I NFPYYRE GW+NSIRHN
Sbjct: 173 EKKNGKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHN 232
Query: 130 LSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDVL---PTRPKKRARSVERASTPYSIDS- 185
LSLNKCF+KVPR DDPGKG+YW +D + +DV T +R + RA + +
Sbjct: 233 LSLNKCFVKVPRHYDDPGKGNYWMLDPS-SDDVFIGGTTGKLRRRSTTSRAKLAFKRGAR 291
Query: 186 -DSLGMECIISGSA-----SPTLAINTVTNKVTL-YNTDQDGSDS---PRSSL--NNSL- 232
S G+ + + SP L+++ TL YN S P SS+ NSL
Sbjct: 292 LTSTGLTFMDRAGSLYWPMSPFLSLHHPRASSTLSYNGTTSAYPSHPMPYSSVLTQNSLG 351
Query: 233 SDQSLASVNLNSVGS-VHSYTPVTSH-------PESVSQSLTPQQQPQYNLPERDKQLLF 284
++ S ++ N SV V+ P +H SV L+ Y+L LL
Sbjct: 352 NNHSFSTANGLSVDRLVNGEIPYATHHLTAAALAASVPCGLSVPCSGTYSLNPCSVNLLA 411
Query: 285 SEYNF--------EDLSASFRSLYKSVFEQSLSQQGLMNIPSESSQQSHTSCTYQHSPSS 336
+ ++ S S S+ S S Q +P ES + S S T S
Sbjct: 412 GQTSYFFPHVPHPSMTSQSSTSMSARAASSSTSPQAPSTLPCESLRPSLPSFTTGLS-GG 470
Query: 337 TVSTHPHSNQSSLSN 351
H NQ S SN
Sbjct: 471 LSDYFTHQNQGSSSN 485
Score = 40.4 bits (93), Expect = 0.005
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 8/56 (14%)
Query: 390 LPQHPQRSPHPAPHPQQHSQLQSPHPQHPSPHQHIQHHPNHQHQTLTHQAPPPPQQ 445
+P+ Q H A H +S HPQH H H HHP Q PPPPQQ
Sbjct: 24 VPEAVQNDNHHASHGHHNSH----HPQHHHHHHHHHHHPPPP----APQPPPPPQQ 71
Score = 39.3 bits (90), Expect = 0.011
Identities = 26/84 (30%), Positives = 28/84 (33%), Gaps = 5/84 (5%)
Query: 372 HPQMHTQPSPHPPHRPHGLPQHPQRSPHPAPHPQQHSQLQSPHPQHPSPHQHIQHHPNHQ 431
HPQ H H H H P P P P P QQ P PQ P +
Sbjct: 44 HPQHH-----HHHHHHHHHPPPPAPQPPPPPQQQQPPPPPPPAPQPPQTRGAPAADDDKG 98
Query: 432 HQTLTHQAPPPPQQVSCNSGVSND 455
Q L PPPP + G D
Sbjct: 99 PQQLLLPPPPPPPPAAALDGAKAD 122
>gi|208431824 forkhead box I3 [Homo sapiens]
Length = 420
Score = 124 bits (310), Expect = 3e-28
Identities = 55/98 (56%), Positives = 77/98 (78%), Gaps = 2/98 (2%)
Query: 78 KPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFL 137
+PPYSY++LI AI S+P++K+TLS IYQ++ D+FP+Y+ + +GW+NSIRHNLSLN CF
Sbjct: 145 RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQNSIRHNLSLNDCFK 204
Query: 138 KVPRSKDDPGKGSYWAIDTNPKE--DVLPTRPKKRARS 173
KVPR +DDPGKG+YW +D N ++ D R K++ RS
Sbjct: 205 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRS 242
>gi|195947376 forkhead box I2 [Homo sapiens]
Length = 318
Score = 123 bits (308), Expect = 6e-28
Identities = 50/80 (62%), Positives = 67/80 (83%)
Query: 78 KPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFL 137
+PPYSY++LI AI S+P +K+TLS+IYQ++ NFP+Y+ + +GW+NSIRHNLSLN CF
Sbjct: 102 RPPYSYSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFK 161
Query: 138 KVPRSKDDPGKGSYWAIDTN 157
KVPR +DDPGKG+YW +D N
Sbjct: 162 KVPRDEDDPGKGNYWTLDPN 181
>gi|50301236 forkhead box J1 [Homo sapiens]
Length = 421
Score = 122 bits (306), Expect = 1e-27
Identities = 57/93 (61%), Positives = 68/93 (73%)
Query: 78 KPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFL 137
KPPYSYA+LI A+ +S K+TLS IY+WI DNF Y+R A W+NSIRHNLSLNKCF+
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQNSIRHNLSLNKCFI 180
Query: 138 KVPRSKDDPGKGSYWAIDTNPKEDVLPTRPKKR 170
KVPR KD+PGKG +W ID E +L KKR
Sbjct: 181 KVPREKDEPGKGGFWRIDPQYAERLLSGAFKKR 213
>gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]
Length = 457
Score = 119 bits (299), Expect = 6e-27
Identities = 53/83 (63%), Positives = 62/83 (74%)
Query: 72 QQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLS 131
+ + KPPYSY SLIT AI SP K +TLSEIYQWI D FP+YR+ W+NSIRH+LS
Sbjct: 153 RSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLS 212
Query: 132 LNKCFLKVPRSKDDPGKGSYWAI 154
N CFLKVPRS D PGKGS+W +
Sbjct: 213 FNDCFLKVPRSPDKPGKGSFWTL 235
Score = 37.7 bits (86), Expect = 0.032
Identities = 37/156 (23%), Positives = 53/156 (33%), Gaps = 6/156 (3%)
Query: 333 SPSSTVSTHPHSNQSSLSNSHGSGLNTTGSNSVAQVSLSHPQMHTQPSPHPPHRPH--GL 390
+P+ T S PHS+ S GL A +LS P+ P H G
Sbjct: 297 TPAGTES--PHSSASPCQEHKRGGLGELKGTPAA--ALSPPEPAPSPGQQQQAAAHLLGP 352
Query: 391 PQHPQRSPHPAPHPQQHSQLQSPHPQHPSPHQHIQHHPNHQHQTLTHQAPPPPQQVSCNS 450
P HP P P+ H P + QHH +H H +QV
Sbjct: 353 PHHPGLPPEAHLKPEHHYAFNHPFSINNLMSSEQQHHHSHHHHQPHKMDLKAYEQVMHYP 412
Query: 451 GVSNDWYATLDMLKESCRIASSVNWSDVDLSQFQGL 486
G + +L M + + + D S +QG+
Sbjct: 413 GYGSPMPGSLAMGPVTNKTGLDASPLAADTSYYQGV 448
>gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]
Length = 463
Score = 119 bits (299), Expect = 6e-27
Identities = 53/83 (63%), Positives = 62/83 (74%)
Query: 72 QQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLS 131
+ + KPPYSY SLIT AI SP K +TLSEIYQWI D FP+YR+ W+NSIRH+LS
Sbjct: 159 RSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLS 218
Query: 132 LNKCFLKVPRSKDDPGKGSYWAI 154
N CFLKVPRS D PGKGS+W +
Sbjct: 219 FNDCFLKVPRSPDKPGKGSFWTL 241
Score = 37.7 bits (86), Expect = 0.032
Identities = 37/156 (23%), Positives = 53/156 (33%), Gaps = 6/156 (3%)
Query: 333 SPSSTVSTHPHSNQSSLSNSHGSGLNTTGSNSVAQVSLSHPQMHTQPSPHPPHRPH--GL 390
+P+ T S PHS+ S GL A +LS P+ P H G
Sbjct: 303 TPAGTES--PHSSASPCQEHKRGGLGELKGTPAA--ALSPPEPAPSPGQQQQAAAHLLGP 358
Query: 391 PQHPQRSPHPAPHPQQHSQLQSPHPQHPSPHQHIQHHPNHQHQTLTHQAPPPPQQVSCNS 450
P HP P P+ H P + QHH +H H +QV
Sbjct: 359 PHHPGLPPEAHLKPEHHYAFNHPFSINNLMSSEQQHHHSHHHHQPHKMDLKAYEQVMHYP 418
Query: 451 GVSNDWYATLDMLKESCRIASSVNWSDVDLSQFQGL 486
G + +L M + + + D S +QG+
Sbjct: 419 GYGSPMPGSLAMGPVTNKTGLDASPLAADTSYYQGV 454
>gi|24497506 forkhead box A3 [Homo sapiens]
Length = 350
Score = 119 bits (297), Expect = 1e-26
Identities = 54/77 (70%), Positives = 60/77 (77%)
Query: 78 KPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFL 137
KPPYSY SLIT AI +P K +TLSEIYQWI D FPYYRE W+NSIRH+LS N CF+
Sbjct: 117 KPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFV 176
Query: 138 KVPRSKDDPGKGSYWAI 154
KV RS D PGKGSYWA+
Sbjct: 177 KVARSPDKPGKGSYWAL 193
>gi|31563338 forkhead box K2 [Homo sapiens]
Length = 660
Score = 118 bits (296), Expect = 1e-26
Identities = 67/152 (44%), Positives = 87/152 (57%), Gaps = 16/152 (10%)
Query: 76 DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKC 135
D KPPYSYA LI AI +P K++TL+ IY I N+PYYR A GW+NSIRHNLSLN+
Sbjct: 256 DSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRY 315
Query: 136 FLKVPRSKDDPGKGSYWAIDTNPKEDVLPTR-PKKRARSVERASTPYSIDSDSLGMECII 194
F+KVPRS+++PGKGS+W ID + ++ K+R R V TP LG
Sbjct: 316 FIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTP-------LGPLSSR 368
Query: 195 SGSASPTLAINTVTNKVTLYNTDQDGSDSPRS 226
S ASP N + + G+ +P S
Sbjct: 369 SAPASP--------NHAGVLSAHSSGAQTPES 392
>gi|119395716 forkhead box C1 [Homo sapiens]
Length = 553
Score = 118 bits (295), Expect = 2e-26
Identities = 51/78 (65%), Positives = 63/78 (80%)
Query: 78 KPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFL 137
KPPYSY +LIT AI ++P KK+TL+ IYQ+I D FP+YR+ GW+NSIRHNLSLN+CF+
Sbjct: 78 KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFV 137
Query: 138 KVPRSKDDPGKGSYWAID 155
KVPR PGKGSYW +D
Sbjct: 138 KVPRDDKKPGKGSYWTLD 155
>gi|24497501 forkhead box A1 [Homo sapiens]
Length = 472
Score = 117 bits (293), Expect = 3e-26
Identities = 52/83 (62%), Positives = 61/83 (73%)
Query: 72 QQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLS 131
+ + KPPYSY SLIT AI +P K +TLSEIYQWI D FPYYR+ W+NSIRH+LS
Sbjct: 164 RSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLS 223
Query: 132 LNKCFLKVPRSKDDPGKGSYWAI 154
N CF+KV RS D PGKGSYW +
Sbjct: 224 FNDCFVKVARSPDKPGKGSYWTL 246
>gi|110735445 forkhead box F1 [Homo sapiens]
Length = 379
Score = 116 bits (290), Expect = 7e-26
Identities = 62/157 (39%), Positives = 88/157 (56%), Gaps = 8/157 (5%)
Query: 35 MRAAIQKSDATQNAHGTGISKKNALLDPNTTLDQEEVQQH----KDGKPPYSYASLITFA 90
M +A +K G G A +DP ++ + + + + KPPYSY +LI A
Sbjct: 1 MSSAPEKQQPPHGGGGGGGGGGGAAMDPASSGPSKAKKTNAGIRRPEKPPYSYIALIVMA 60
Query: 91 INSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGS 150
I SSP K++TLSEIYQ++ FP++R + GWKNS+RHNLSLN+CF+K+P+ PGKG
Sbjct: 61 IQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGH 120
Query: 151 YWAIDTNP----KEDVLPTRPKKRARSVERASTPYSI 183
YW ID +E RP+ R + YS+
Sbjct: 121 YWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMYSM 157
>gi|105554437 forkhead box B1 [Homo sapiens]
Length = 325
Score = 115 bits (289), Expect = 9e-26
Identities = 50/81 (61%), Positives = 61/81 (75%)
Query: 74 HKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLN 133
+ D KPPYSY SL AI SSP+K + LSEIY++I D FPYYRE W+NS+RHNLS N
Sbjct: 9 YSDQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFN 68
Query: 134 KCFLKVPRSKDDPGKGSYWAI 154
CF+K+PR D PGKGS+WA+
Sbjct: 69 DCFIKIPRRPDQPGKGSFWAL 89
>gi|134142824 forkhead box D2 [Homo sapiens]
Length = 495
Score = 114 bits (285), Expect = 3e-25
Identities = 50/78 (64%), Positives = 61/78 (78%)
Query: 78 KPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFL 137
KPPYSY +LIT AI SPKK++TLSEI ++I FPYYRE W+NSIRHNLSLN CF+
Sbjct: 127 KPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFV 186
Query: 138 KVPRSKDDPGKGSYWAID 155
K+PR +PGKG+YW +D
Sbjct: 187 KIPREPGNPGKGNYWTLD 204
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 114 bits (285), Expect = 3e-25
Identities = 50/78 (64%), Positives = 61/78 (78%)
Query: 78 KPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFL 137
KPPYSY +LIT AI SPKK++TLSEI ++I FPYYRE W+NSIRHNLSLN CF+
Sbjct: 125 KPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFV 184
Query: 138 KVPRSKDDPGKGSYWAID 155
K+PR +PGKG+YW +D
Sbjct: 185 KIPREPGNPGKGNYWTLD 202
>gi|4557595 forkhead box F2 [Homo sapiens]
Length = 444
Score = 113 bits (283), Expect = 5e-25
Identities = 49/78 (62%), Positives = 61/78 (78%)
Query: 78 KPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFL 137
KPPYSY +LI AI SSP K++TLSEIYQ++ FP++R A GWKNS+RHNLSLN+CF+
Sbjct: 100 KPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFI 159
Query: 138 KVPRSKDDPGKGSYWAID 155
K+P+ PGKG YW ID
Sbjct: 160 KLPKGLGRPGKGHYWTID 177
>gi|22779860 forkhead box L1 [Homo sapiens]
Length = 345
Score = 113 bits (282), Expect = 6e-25
Identities = 48/78 (61%), Positives = 61/78 (78%)
Query: 78 KPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFL 137
KPPYSY +LI AI +P++++TL+ IYQ+I D FP+Y + GW+NSIRHNLSLN CF+
Sbjct: 49 KPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFV 108
Query: 138 KVPRSKDDPGKGSYWAID 155
KVPR K PGKGSYW +D
Sbjct: 109 KVPREKGRPGKGSYWTLD 126
>gi|82546824 forkhead box K1 [Homo sapiens]
Length = 733
Score = 113 bits (282), Expect = 6e-25
Identities = 60/127 (47%), Positives = 81/127 (63%), Gaps = 8/127 (6%)
Query: 76 DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKC 135
+ KPP+SYA LI AI+S+ +++TLS IY I ++PYYR A GW+NSIRHNLSLN+
Sbjct: 303 ESKPPFSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQNSIRHNLSLNRY 362
Query: 136 FLKVPRSKDDPGKGSYWAIDTNPKEDVLPTR-PKKRARSVERASTPYSIDSDSLGMECII 194
F+KVPRS+++PGKGS+W ID + ++ K+R R V TP+ S
Sbjct: 363 FIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFGPLSSR------- 415
Query: 195 SGSASPT 201
S ASPT
Sbjct: 416 SAPASPT 422
>gi|6912372 forkhead box D3 [Homo sapiens]
Length = 478
Score = 112 bits (280), Expect = 1e-24
Identities = 49/83 (59%), Positives = 63/83 (75%)
Query: 78 KPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFL 137
KPPYSY +LIT AI SP+KK+TLS I ++I + FPYYRE W+NSIRHNLSLN CF+
Sbjct: 141 KPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFV 200
Query: 138 KVPRSKDDPGKGSYWAIDTNPKE 160
K+PR +PGKG+YW +D ++
Sbjct: 201 KIPREPGNPGKGNYWTLDPQSED 223
>gi|21618325 forkhead box E1 [Homo sapiens]
Length = 373
Score = 111 bits (277), Expect = 2e-24
Identities = 52/108 (48%), Positives = 75/108 (69%), Gaps = 5/108 (4%)
Query: 77 GKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCF 136
GKPPYSY +LI AI +P++++TL IY++I + FP+YR+ W+NSIRHNL+LN CF
Sbjct: 52 GKPPYSYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCF 111
Query: 137 LKVPRSKDDPGKGSYWAIDTNPKEDVLPT----RPKKRARSVERASTP 180
LK+PR PGKG+YWA+D N ED+ + R +KR + + ++ P
Sbjct: 112 LKIPREAGRPGKGNYWALDPN-AEDMFESGSFLRRRKRFKRSDLSTYP 158
>gi|61966923 forkhead box B2 [Homo sapiens]
Length = 432
Score = 108 bits (269), Expect = 2e-23
Identities = 46/81 (56%), Positives = 59/81 (72%)
Query: 74 HKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLN 133
+ D KPPYSY SL AI S +K + LS+IY++I + FPYYRE W+NS+RHNLS N
Sbjct: 9 YSDQKPPYSYISLTAMAIQHSAEKMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNLSFN 68
Query: 134 KCFLKVPRSKDDPGKGSYWAI 154
CF+K+PR D PGKGS+WA+
Sbjct: 69 DCFIKIPRRPDQPGKGSFWAL 89
Score = 42.4 bits (98), Expect = 0.001
Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 373 PQMHTQPSPHPPHRPHGLPQHPQRSPHPAPH-----PQQHSQLQSP-HPQHPSPHQ 422
PQ P P PPH H Q P +P P PH PQQ Q P P HP Q
Sbjct: 163 PQPPPPPPPPPPHMVHYFHQQPPTAPQPPPHLPSQPPQQPPQQSQPQQPSHPGKMQ 218
Score = 40.4 bits (93), Expect = 0.005
Identities = 25/70 (35%), Positives = 27/70 (38%), Gaps = 11/70 (15%)
Query: 381 PHPPHRPHGLPQHPQRSPHPAPHPQQHSQLQSPHPQHPSPHQHIQHHPNHQHQTLTHQAP 440
PH H PH H H A H H P P P P H+ H+ HQ Q P
Sbjct: 138 PHHHHHPHHHHHH-----HAAAHHHHHHHPPQPPPPPPPPPPHMVHY-FHQQPPTAPQPP 191
Query: 441 P-----PPQQ 445
P PPQQ
Sbjct: 192 PHLPSQPPQQ 201
Score = 37.0 bits (84), Expect = 0.054
Identities = 31/110 (28%), Positives = 37/110 (33%), Gaps = 18/110 (16%)
Query: 341 HPHSNQSSLSNSHGSGLNTTGSNSVAQVSLSHPQMHTQPSPHPPHRP-------HGLPQH 393
H H + S ++ G+G G + HP H P H H H PQ
Sbjct: 116 HTHLHAGSTKSAPGAG---PGGHL-------HPHHHHHPHHHHHHHAAAHHHHHHHPPQP 165
Query: 394 PQRSPHPAPHPQQHSQLQSPHPQHPSPHQHIQHHPNHQHQTLTHQAPPPP 443
P P P PH + Q P P PH Q P Q Q P P
Sbjct: 166 PPPPPPPPPHMVHYFHQQPPTAPQPPPHLPSQ-PPQQPPQQSQPQQPSHP 214
Score = 35.8 bits (81), Expect = 0.12
Identities = 22/75 (29%), Positives = 25/75 (33%), Gaps = 13/75 (17%)
Query: 372 HPQMHTQPSPHPPHRPHGLPQHPQRSPHPAPHPQQHSQLQSPHPQHPSPHQHIQHHPNHQ 431
H +H + P G HP HP H H H + H H HHP
Sbjct: 116 HTHLHAGSTKSAPGAGPGGHLHPHHHHHPHHH----------HHHHAAAHHHHHHHPP-- 163
Query: 432 HQTLTHQAPPPPQQV 446
Q PPPP V
Sbjct: 164 -QPPPPPPPPPPHMV 177
>gi|18959276 forkhead box D4-like 1 [Homo sapiens]
Length = 408
Score = 107 bits (267), Expect = 3e-23
Identities = 50/94 (53%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Query: 62 PNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSG 121
P + E+ +Q KPPYSY +LIT AI SP K++TLS I +I FPYYR
Sbjct: 93 PRSAAASEDARQ--PAKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPA 150
Query: 122 WKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAID 155
W+NSIRHNLSLN CF+K+PR PGKG+YW++D
Sbjct: 151 WQNSIRHNLSLNDCFVKIPREPGHPGKGTYWSLD 184
Score = 30.0 bits (66), Expect = 6.6
Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 9/53 (16%)
Query: 398 PHPAPHPQQHSQLQSPHP---------QHPSPHQHIQHHPNHQHQTLTHQAPP 441
PHP P P H+ L +P P P P + P + L H PP
Sbjct: 215 PHPFPLPAAHAALHNPRPGPLLGAPALPQPVPGAYPNTAPGRRPYALLHPHPP 267
>gi|28973785 forkhead box S1 [Homo sapiens]
Length = 330
Score = 107 bits (267), Expect = 3e-23
Identities = 48/78 (61%), Positives = 58/78 (74%)
Query: 78 KPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFL 137
KPPYSY +LI AI SSP ++ TLS IY++I F +YR GW+NSIRHNLSLN+CF+
Sbjct: 18 KPPYSYIALIAMAIQSSPGQRATLSGIYRYIMGRFAFYRHNRPGWQNSIRHNLSLNECFV 77
Query: 138 KVPRSKDDPGKGSYWAID 155
KVPR PGKGSYW +D
Sbjct: 78 KVPRDDRKPGKGSYWTLD 95
>gi|40549454 T-cell leukemia virus enhancer factor [Homo sapiens]
Length = 431
Score = 107 bits (266), Expect = 4e-23
Identities = 82/285 (28%), Positives = 125/285 (43%), Gaps = 43/285 (15%)
Query: 68 QEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIR 127
Q ++ KPPYS++ LI AI SP K + + EIY WI D+FPY+ A +GWKNS+R
Sbjct: 102 QNPEKKSATSKPPYSFSLLIYMAIEHSPNKCLPVKEIYSWILDHFPYFATAPTGWKNSVR 161
Query: 128 HNLSLNKCFLKVPRSKDD-PGKGSYWAIDTNPKEDVLPTRPKKRARSVERASTPYSIDSD 186
HNLSLNKCF KV RS GKGS W +D K +++ K+ P+S S
Sbjct: 162 HNLSLNKCFQKVERSHGKVNGKGSLWCVDPEYKPNLIQALKKQ----------PFSSASS 211
Query: 187 SLGMECIISGSASPTLAINTVTNKVTLYNTDQDGSDSPRSSLNNSLSDQSLASVN----- 241
+GS SP + + + D + L N+ +Q +
Sbjct: 212 Q-------NGSLSPHYLSSVIKQNQVRNLKESDIDAAAAMMLLNTSIEQGILECEKPLPL 264
Query: 242 LNSVGSVHSYTPVTSHP--------ESVSQSLTPQQQPQYNLPERDKQLLFSEYNFEDLS 293
++ SY HP +S++ S+ P++ Y+ Q S + LS
Sbjct: 265 KTALQKKRSYGNAFHHPSAVRLQESDSLATSIDPKEDHNYSASSMAAQRCASRSSVSSLS 324
Query: 294 ASFRSLYKSVFEQSLSQQGLMNIPSESSQQSH----TSCTYQHSP 334
S +Y+ + + S ++ S+ S+ H T Y+ P
Sbjct: 325 -SVDEVYEFIPKNS-------HVGSDGSEGFHSEEDTDVDYEDDP 361
>gi|157042770 forkhead box D4-like 3 [Homo sapiens]
Length = 417
Score = 106 bits (264), Expect = 7e-23
Identities = 49/94 (52%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Query: 62 PNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSG 121
P + E+ +Q KPPYSY +LIT AI +P K++TLS I +I FPYYR
Sbjct: 94 PRSAAASEDARQ--PAKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPA 151
Query: 122 WKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAID 155
W+NSIRHNLSLN CF+K+PR PGKG+YW++D
Sbjct: 152 WQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLD 185
>gi|21618329 forkhead box I1 isoform b [Homo sapiens]
Length = 283
Score = 106 bits (264), Expect = 7e-23
Identities = 47/79 (59%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Query: 68 QEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIR 127
QEE+ K +PPYSY++LI AI+ +P K++TLS+IYQ++ DNFP+Y ++ +GW+NSIR
Sbjct: 115 QEELM--KLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIR 172
Query: 128 HNLSLNKCFLKVPRSKDDP 146
HNLSLN CF KVPR +DDP
Sbjct: 173 HNLSLNDCFKKVPRDEDDP 191
>gi|149944560 forkhead box D4-like 2 [Homo sapiens]
Length = 416
Score = 106 bits (264), Expect = 7e-23
Identities = 49/94 (52%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Query: 62 PNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSG 121
P + E+ +Q KPPYSY +LIT AI +P K++TLS I +I FPYYR
Sbjct: 94 PRSAAASEDARQ--PAKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPA 151
Query: 122 WKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAID 155
W+NSIRHNLSLN CF+K+PR PGKG+YW++D
Sbjct: 152 WQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLD 185
Score = 30.4 bits (67), Expect = 5.1
Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 9/52 (17%)
Query: 398 PHPAPHPQQHSQLQSPH---------PQHPSPHQHIQHHPNHQHQTLTHQAP 440
PHP P P H+ L +PH P P P + P + L H P
Sbjct: 216 PHPFPLPAAHAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHP 267
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.125 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,326,152
Number of Sequences: 37866
Number of extensions: 1554540
Number of successful extensions: 12710
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 263
Number of HSP's successfully gapped in prelim test: 590
Number of HSP's that attempted gapping in prelim test: 8005
Number of HSP's gapped (non-prelim): 3382
length of query: 622
length of database: 18,247,518
effective HSP length: 108
effective length of query: 514
effective length of database: 14,157,990
effective search space: 7277206860
effective search space used: 7277206860
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.