C9orf47 31359

Name: C9orf47	Sequence: fasta or formatted (202aa)		NCBI GI: 50080156
Description: hypothetical protein LOC286223 isoform 1		Not currently referenced in the text
Other entries for this name: alt prot {183aa} hypothetical protein LOC286223 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 16 1 C cysteine 0.5 1 1 D aspartate 5.4 11 1 E glutamate 5.0 10 1 F phenylalanine 3.0 6 1 G glycine 8.9 18 3 H histidine 1.5 3 1 I isoleucine 3.0 6 1 K lysine 3.0 6 1 L leucine 8.4 17 3 M methionine 2.0 4 1 N asparagine 3.0 6 1 P proline 12.9 26 2 Q glutamine 5.0 10 1 R arginine 10.4 21 3 S serine 6.9 14 2 T threonine 5.0 10 2 V valine 5.0 10 1 W tryptophan 3.0 6 1 Y tyrosine 0.5 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC286223 isoform 1 C9orf47 0.860 hypothetical protein LOC286223 isoform 2 PRB1 0.048 proline-rich protein BstNI subfamily 1 isoform 2 pre... COL7A1 0.045 alpha 1 type VII collagen precursor GGN 0.043 gametogenetin PWWP2A 0.035 PWWP domain containing 2A isoform b PWWP2A 0.035 PWWP domain containing 2A isoform a PRB1 0.035 proline-rich protein BstNI subfamily 1 isoform 1 pre... PRB1 0.035 proline-rich protein BstNI subfamily 1 isoform 3 pre... PRG4 0.035 proteoglycan 4 isoform D PRG4 0.035 proteoglycan 4 isoform C PRG4 0.035 proteoglycan 4 isoform B PRG4 0.035 proteoglycan 4 isoform A PRB2 0.035 proline-rich protein BstNI subfamily 2 NACA 0.035 nascent polypeptide-associated complex alpha subuni... ANKRD18A 0.033 PREDICTED: ankyrin repeat domain 18A ANKRD18A 0.033 PREDICTED: ankyrin repeat domain 18A IQSEC2 0.033 IQ motif and Sec7 domain 2 isoform 2 IQSEC2 0.033 IQ motif and Sec7 domain 2 isoform1 PRB4 0.030 proline-rich protein BstNI subfamily 4 precursor [Ho... COL1A1 0.028 alpha 1 type I collagen preproprotein RBMXL2 0.028 testes-specific heterogenous nuclear ribonucleoprot... PRB3 0.028 proline-rich protein BstNI subfamily 3 precursor [H... LOC651856 0.028 PREDICTED: similar to hCG2023245 SETD1A 0.028 SET domain containing 1A C2orf55 0.028 hypothetical protein LOC343990 KLHDC7B 0.028 kelch domain containing 7B COL3A1 0.025 collagen type III alpha 1 preproprotein MUC7 0.025 mucin 7, secreted precursor MUC7 0.025 mucin 7, secreted precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.