Guide to the Human Genome
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Name: BIN3 Sequence: fasta or formatted (253aa) NCBI GI: 8923904
Description:

bridging integrator 3

Referenced in:

Myc and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         16           1
 C cysteine            0.4          1           1
 D aspartate           6.7         17           2
 E glutamate          10.3         26           2
 F phenylalanine       4.0         10           1
 G glycine             2.8          7           1
 H histidine           1.6          4           1
 I isoleucine          3.6          9           1
 K lysine              9.5         24           2
 L leucine            10.7         27           2
 M methionine          3.6          9           1
 N asparagine          2.8          7           1
 P proline             4.3         11           1
 Q glutamine           8.3         21           2
 R arginine            7.5         19           2
 S serine              6.3         16           1
 T threonine           2.8          7           1
 V valine              5.5         14           2
 W tryptophan          0.4          1           1
 Y tyrosine            2.8          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bridging integrator 3 
BIN2                  0.078   bridging integrator 2 
BIN1                  0.068   bridging integrator 1 isoform 10 
BIN1                  0.068   bridging integrator 1 isoform 9 
BIN1                  0.068   bridging integrator 1 isoform 7 
BIN1                  0.068   bridging integrator 1 isoform 6 
BIN1                  0.068   bridging integrator 1 isoform 5 
BIN1                  0.068   bridging integrator 1 isoform 4 
BIN1                  0.068   bridging integrator 1 isoform 8 
AMPH                  0.055   amphiphysin isoform 2 
AMPH                  0.055   amphiphysin isoform 1 
DNMBP                 0.049   dynamin binding protein 
BIN1                  0.049   bridging integrator 1 isoform 3 
BIN1                  0.049   bridging integrator 1 isoform 2 
BIN1                  0.049   bridging integrator 1 isoform 1 
CCDC88C               0.040   DVL-binding protein DAPLE 
MYH13                 0.040   myosin, heavy polypeptide 13, skeletal muscle [Homo...
CENPF                 0.038   centromere protein F 
CEP250                0.036   centrosomal protein 2 
RAD50                 0.036   RAD50 homolog isoform 2 
RAD50                 0.036   RAD50 homolog isoform 1 
PLEC1                 0.036   plectin 1 isoform 11 
PLEC1                 0.036   plectin 1 isoform 10 
PLEC1                 0.036   plectin 1 isoform 8 
PLEC1                 0.036   plectin 1 isoform 7 
PLEC1                 0.036   plectin 1 isoform 6 
PLEC1                 0.036   plectin 1 isoform 3 
PLEC1                 0.036   plectin 1 isoform 2 
PLEC1                 0.036   plectin 1 isoform 1 
MYH10                 0.034   myosin, heavy polypeptide 10, non-muscle 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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