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Search of human proteins with 4885381
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4885381 histone cluster 1, H1b [Homo sapiens]
(226 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4885381 histone cluster 1, H1b [Homo sapiens] 427 e-120
gi|4885379 histone cluster 1, H1e [Homo sapiens] 337 5e-93
gi|4885377 histone cluster 1, H1d [Homo sapiens] 311 2e-85
gi|4885375 histone cluster 1, H1c [Homo sapiens] 299 1e-81
gi|4885373 histone cluster 1, H1a [Homo sapiens] 253 1e-67
gi|20544168 histone cluster 1, H1t [Homo sapiens] 173 9e-44
gi|4885371 H1 histone family, member 0 [Homo sapiens] 114 5e-26
gi|5174449 H1 histone family, member X [Homo sapiens] 96 3e-20
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 77 1e-14
gi|24475863 H1 histone family, member O, oocyte-specific [Homo s... 71 9e-13
gi|32401437 H1 histone family, member N, testis-specific [Homo s... 64 1e-10
gi|111548666 SNF2 histone linker PHD RING helicase isoform a [Ho... 59 3e-09
gi|27436873 SNF2 histone linker PHD RING helicase isoform b [Hom... 59 3e-09
gi|55743106 alpha 3 type VI collagen isoform 5 precursor [Homo s... 54 1e-07
gi|55743098 alpha 3 type VI collagen isoform 1 precursor [Homo s... 54 1e-07
gi|240255535 alpha 3 type VI collagen isoform 4 precursor [Homo ... 54 1e-07
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 54 1e-07
gi|153070260 myristoylated alanine-rich protein kinase C substra... 54 1e-07
gi|78000183 ribosomal protein L14 [Homo sapiens] 51 7e-07
gi|78000181 ribosomal protein L14 [Homo sapiens] 51 7e-07
gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo... 51 9e-07
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 50 2e-06
gi|239758117 PREDICTED: hypothetical protein [Homo sapiens] 49 3e-06
gi|104526627 triadin [Homo sapiens] 49 3e-06
gi|56676330 HP1-BP74 [Homo sapiens] 49 3e-06
gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo ... 49 5e-06
gi|150170670 piccolo isoform 2 [Homo sapiens] 48 6e-06
gi|150378539 piccolo isoform 1 [Homo sapiens] 48 6e-06
gi|29244924 chromodomain helicase DNA binding protein 6 [Homo sa... 48 6e-06
gi|153791662 coiled-coil domain containing 71 [Homo sapiens] 48 8e-06
>gi|4885381 histone cluster 1, H1b [Homo sapiens]
Length = 226
Score = 427 bits (1097), Expect = e-120
Identities = 226/226 (100%), Positives = 226/226 (100%)
Query: 1 MSETAPAETATPAPVEKSPAKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGL 60
MSETAPAETATPAPVEKSPAKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGL
Sbjct: 1 MSETAPAETATPAPVEKSPAKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGL 60
Query: 61 SLAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAK 120
SLAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAK
Sbjct: 61 SLAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAK 120
Query: 121 PKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAA 180
PKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAA
Sbjct: 121 PKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAA 180
Query: 181 AKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKKK 226
AKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKKK
Sbjct: 181 AKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKKK 226
>gi|4885379 histone cluster 1, H1e [Homo sapiens]
Length = 219
Score = 337 bits (864), Expect = 5e-93
Identities = 188/222 (84%), Positives = 193/222 (86%), Gaps = 6/222 (2%)
Query: 1 MSETAPAETATPAPVEKSPAKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGL 60
MSETAPA A PAP EK+P KKKA K A GAAKRKA+GPPVSELITKAVAASKER+G+
Sbjct: 1 MSETAPAAPAAPAPAEKTPVKKKARKSA---GAAKRKASGPPVSELITKAVAASKERSGV 57
Query: 61 SLAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAK 120
SLAALKKALAA GYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAK
Sbjct: 58 SLAALKKALAAAGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAK 117
Query: 121 PKAKKAGAAKAKKPAGAT--PKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAK 178
PKAKKAGAAKAKKPAGA PKKA AA KK+ KKTPKKAKKPAAA K AKSPKKAK
Sbjct: 118 PKAKKAGAAKAKKPAGAAKKPKKATGAATPKKSAKKTPKKAKKPAAAAGAKKAKSPKKAK 177
Query: 179 AAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKK 220
AAKPKKA KSPAK KAVKPKAAKPK AKPKAAKPK A AKK
Sbjct: 178 -AAKPKKAPKSPAKAKAVKPKAAKPKTAKPKAAKPKKAAAKK 218
>gi|4885377 histone cluster 1, H1d [Homo sapiens]
Length = 221
Score = 311 bits (798), Expect = 2e-85
Identities = 179/230 (77%), Positives = 188/230 (81%), Gaps = 13/230 (5%)
Query: 1 MSETAPAETATPAPVEKSPAKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGL 60
MSETAP PAP EK+P KKKA K AGA A KRKA+GPPVSELITKAVAASKER+G+
Sbjct: 1 MSETAPLAPTIPAPAEKTPVKKKAKK--AGATAGKRKASGPPVSELITKAVAASKERSGV 58
Query: 61 SLAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAK 120
SLAALKKALAA GYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGE K
Sbjct: 59 SLAALKKALAAAGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEGK 118
Query: 121 PKAKKAGAAKAKKPAGATPKKAKKAAGA---KKAVKKTPKKAKKPA-AAGVKKVAKSPKK 176
PKAKKAGAAK +KPAGA KK KK AGA KK++KKTPKK KKPA AAG KKVAKS KK
Sbjct: 119 PKAKKAGAAKPRKPAGAA-KKPKKVAGAATPKKSIKKTPKKVKKPATAAGTKKVAKSAKK 177
Query: 177 AKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKKK 226
K +PKKA KSPA K KA KPKAAKPK+ KPK KAKKAA KKK
Sbjct: 178 VK-TPQPKKAAKSPA-----KAKAPKPKAAKPKSGKPKVTKAKKAAPKKK 221
>gi|4885375 histone cluster 1, H1c [Homo sapiens]
Length = 213
Score = 299 bits (765), Expect = 1e-81
Identities = 171/217 (78%), Positives = 176/217 (81%), Gaps = 9/217 (4%)
Query: 1 MSETAPAETATPAPVEKSPAKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGL 60
MSETAPA A P EK+P KKKA KKA G RKA+GPPVSELITKAVAASKER+G+
Sbjct: 1 MSETAPAAPAAAPPAEKAPVKKKAAKKAGGT---PRKASGPPVSELITKAVAASKERSGV 57
Query: 61 SLAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAK 120
SLAALKKALAA GYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAK
Sbjct: 58 SLAALKKALAAAGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAK 117
Query: 121 PKAKKAGAAKAKKPAGATPKKAKKAAGA--KKAVKKTPKKAKKPAAAGV-KKVAKSPKKA 177
PK KKAG K KKP GA K K A GA KK+ KKTPKKAKKPAAA V KKVAKSPKKA
Sbjct: 118 PKVKKAGGTKPKKPVGAAKKPKKAAGGATPKKSAKKTPKKAKKPAAATVTKKVAKSPKKA 177
Query: 178 KAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPK 214
K AKPKKA KS A KAVKPKAAKPK KPK A PK
Sbjct: 178 K-VAKPKKAAKSAA--KAVKPKAAKPKVVKPKKAAPK 211
>gi|4885373 histone cluster 1, H1a [Homo sapiens]
Length = 215
Score = 253 bits (645), Expect = 1e-67
Identities = 147/220 (66%), Positives = 160/220 (72%), Gaps = 6/220 (2%)
Query: 1 MSETAPAETATPAPVEKSPAKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGL 60
MSET P A A EK A KKA K A A A+K+K GP VSELI +A ++SKER G+
Sbjct: 1 MSETVPPAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGV 60
Query: 61 SLAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAK 120
SLAALKKALAA GYDVEKNNSRIKLG+KSLVSKGTLVQTKGTGASGSFKLNKKA+S E K
Sbjct: 61 SLAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETK 120
Query: 121 PKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAA 180
P A K A K GA+ KK KKA GA K KTPKKAKKPAA +K +K+PKK K
Sbjct: 121 PGASK--VATKTKATGAS-KKLKKATGASKKSVKTPKKAKKPAA--TRKSSKNPKKPK-T 174
Query: 181 AKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKK 220
KPKK KSPAK KAVKPKAAK + KPK AKPK A KK
Sbjct: 175 VKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKK 214
>gi|20544168 histone cluster 1, H1t [Homo sapiens]
Length = 207
Score = 173 bits (439), Expect = 9e-44
Identities = 111/216 (51%), Positives = 138/216 (63%), Gaps = 12/216 (5%)
Query: 1 MSETAPAETATP--APVEKSPAKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERN 58
MSET PA +A+ A +EK P KK+ +K AG +A RK VS+LIT+A++ S+ER
Sbjct: 1 MSETVPAASASAGVAAMEKLPTKKRG-RKPAGLISASRKVPNLSVSKLITEALSVSQERV 59
Query: 59 GLSLAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGE 118
G+SL ALKKALAA GYDVEKNNSRIKL LKSLV+KG LVQT+GTGASGSFKL+KK
Sbjct: 60 GMSLVALKKALAAAGYDVEKNNSRIKLSLKSLVNKGILVQTRGTGASGSFKLSKKVIPKS 119
Query: 119 AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAK 178
+ KAKK+ +AK KK + K+ K A KT K+AKKP A K +S +KAK
Sbjct: 120 TRSKAKKSVSAKTKKLVLSRDSKSPKTA-------KTNKRAKKPRAT-TPKTVRSGRKAK 171
Query: 179 AAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPK 214
AK K+ KSP K +A K K + + A K
Sbjct: 172 -GAKGKQQQKSPVKARASKSKLTQHHEVNVRKATSK 206
>gi|4885371 H1 histone family, member 0 [Homo sapiens]
Length = 194
Score = 114 bits (286), Expect = 5e-26
Identities = 90/228 (39%), Positives = 111/228 (48%), Gaps = 45/228 (19%)
Query: 8 ETATPAPVEKSPAKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGLSLAALKK 67
E +T AP K P + KA+KK+ P S++I A+ A K R G S +++K
Sbjct: 3 ENSTSAPAAK-PKRAKASKKSTDH---------PKYSDMIVAAIQAEKNRAGSSRQSIQK 52
Query: 68 ALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAKPKAKKAG 127
+ + E +S+IKL +K LV+ G L QTKG GASGSF+L K
Sbjct: 53 YIKSHYKVGENADSQIKLSIKRLVTTGVLKQTKGVGASGSFRLAKSDE------------ 100
Query: 128 AAKAKKPAGATPKKAKKAAGAKKAVKK--TPKKAKKPAAAGVKKVAKSPK-------KAK 178
PKK+ KK +KK TPKKA KP A K K PK K K
Sbjct: 101 -----------PKKSVAFKKTKKEIKKVATPKKASKPKKAASKAPTKKPKATPVKKAKKK 149
Query: 179 AAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKKK 226
AA PKKA K P KA KA+KPK AKP KPKA + K A KKK
Sbjct: 150 LAATPKKA-KKPKTVKAKPVKASKPKKAKP--VKPKAKSSAKRAGKKK 194
>gi|5174449 H1 histone family, member X [Homo sapiens]
Length = 213
Score = 95.5 bits (236), Expect = 3e-20
Identities = 72/211 (34%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 8 ETATPAPVEKSPAKKKATKKAAGAGA---------AKRKATGPPVSELITKAVAASKERN 58
E A P + AKK KA G+ A +K+K S+L+ + + ERN
Sbjct: 6 EEALPVTTAEGMAKK--VTKAGGSAALSPSKKRKNSKKKNQPGKYSQLVVETIRRLGERN 63
Query: 59 GLSLAAL-KKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASG 117
G SLA + +A +D + + +K +K+LV TL+Q KGTGA+GSFKLN+K G
Sbjct: 64 GSSLAKIYTEAKKVPWFDQQNGRTYLKYSIKALVQNDTLLQVKGTGANGSFKLNRKKLEG 123
Query: 118 EAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKA 177
+ + A A A K A AAG+++A KK P + +KP KK A + K
Sbjct: 124 GGERRGAPAAATAPAPTAHKAKKAAPGAAGSRRADKK-PARGQKPEQRSHKKGAGAKKDK 182
Query: 178 KAAAKPKKATKSPAKPKAVKPKAAK-PKAAK 207
AK A KA KP K PK K
Sbjct: 183 GGKAKKTAAAGGKKVKKAAKPSVPKVPKGRK 213
Score = 33.9 bits (76), Expect = 0.12
Identities = 29/76 (38%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 5 APAETATPAPVEKSPAKKKATKKAAGAGAA-KRKATG-PPVSELITKAVAASKERNGLSL 62
APA PAP KKA AAG+ A K+ A G P K A K++ G +
Sbjct: 130 APAAATAPAPTAHKA--KKAAPGAAGSRRADKKPARGQKPEQRSHKKGAGAKKDKGGKA- 186
Query: 63 AALKKALAAGGYDVEK 78
KK AAGG V+K
Sbjct: 187 ---KKTAAAGGKKVKK 199
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 77.0 bits (188), Expect = 1e-14
Identities = 70/224 (31%), Positives = 101/224 (45%), Gaps = 13/224 (5%)
Query: 5 APAETATPAPVEKSPAKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGLSLAA 64
+PAE +P KSPAK++A K +A P + KA + +KE A
Sbjct: 540 SPAEVKSPEKA-KSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEA 598
Query: 65 LKKALAAGGYDVE-KNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAKPKA 123
A E K+ + K +K V++ S + + K ++ K
Sbjct: 599 KSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKE 658
Query: 124 KKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAK- 182
+ KAK P A K +KA KA K+P+KAK P VK+ AKSP+KAK+ K
Sbjct: 659 EAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSP----VKEEAKSPEKAKSPVKE 714
Query: 183 ----PKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAA 222
P+KA KSP K +A P+ AK K +A P+ AK+ + A
Sbjct: 715 EAKSPEKA-KSPVKEEAKTPEKAK-SPVKEEAKSPEKAKSPEKA 756
Score = 71.2 bits (173), Expect = 7e-13
Identities = 67/234 (28%), Positives = 99/234 (42%), Gaps = 20/234 (8%)
Query: 2 SETAPAE-TATPAPVEKSPAKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGL 60
+++ PAE A+P KSP K++A A K +A P + KA + +KE
Sbjct: 501 TKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEE--- 557
Query: 61 SLAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAK 120
K A + E+ S ++ + K + S + K EAK
Sbjct: 558 ----AKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAK 613
Query: 121 PKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKA--- 177
A+ K + + A K +KA K K+P+KAK P K+ AKSP+KA
Sbjct: 614 SPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPE----KEEAKSPEKAKSP 669
Query: 178 -KAAAKPKKATKSPAKPKAVKPKAA----KPKAAKPKAAKPKAAKAKKAAAKKK 226
KA AK + KSP K +A P+ A K +A P+ AK + K+ K K
Sbjct: 670 VKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAK 723
Score = 63.2 bits (152), Expect = 2e-10
Identities = 67/228 (29%), Positives = 95/228 (41%), Gaps = 37/228 (16%)
Query: 5 APAETATPAPVEKSPAKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGLSLAA 64
+PAE +P KSP K++A A K +A P + KA + +KE
Sbjct: 594 SPAEAKSPEKA-KSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEE------- 645
Query: 65 LKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAKPKAK 124
EK S K KS + V+ + K ++ KA+
Sbjct: 646 --------AKSPEKAKSPEKEEAKSPEKAKSPVKAEA----------KSPEKAKSPVKAE 687
Query: 125 KAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAK-- 182
KAK P K +KA K K+P+KAK P VK+ AK+P+KAK+ K
Sbjct: 688 AKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSP----VKEEAKTPEKAKSPVKEE 743
Query: 183 ---PKKATKSPAKPKAVKPKAAKPKA-AKPKAAKPKAAKAKKAAAKKK 226
P+KA KSP K K + K+ + K AK +A P +KA + K
Sbjct: 744 AKSPEKA-KSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVK 790
Score = 62.0 bits (149), Expect = 4e-10
Identities = 65/235 (27%), Positives = 93/235 (39%), Gaps = 14/235 (5%)
Query: 5 APAETATPAPVE-KSPAKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGLSLA 63
+P + +P E KSP K K+ KA K K+ ++ KA + KE S
Sbjct: 662 SPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEE-AKSPE 720
Query: 64 ALKKALAAGGYDVEKNNSRIKLGLKS-----LVSKGTLVQTKGTGASGSFKLNKKAASGE 118
K + EK S +K KS K + K A K ++ + +
Sbjct: 721 KAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADK 780
Query: 119 AKPKAKKA------GAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAK 172
KAK KAK P K +K K+ VK K+ +KP VK+ K
Sbjct: 781 FPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPK 840
Query: 173 SPKKAKAAAKPK-KATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKKK 226
++ KA A PK + K K +A K +A KPK + K + K K AKK+
Sbjct: 841 KAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKE 895
Score = 52.4 bits (124), Expect = 3e-07
Identities = 70/243 (28%), Positives = 98/243 (40%), Gaps = 27/243 (11%)
Query: 6 PAETATPAPVE-KSPAKKKATKKAAGAGAAKRKATGP-------PVSELITKAVAASKER 57
P + +P E KSP K K+ +KA +A P P + KA + KE
Sbjct: 733 PEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEE 792
Query: 58 ---NGLSLAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKA 114
+ + LK+ A ++ K +K +K K V+ K +
Sbjct: 793 VKSPEKAKSPLKEDAKAPEKEIPKKEE-VKSPVKE-EEKPQEVKVKEPPKKAEEEKAPAT 850
Query: 115 ASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSP 174
E K +KK A K + P PK +K A + K++ +AKK A KKV
Sbjct: 851 PKTEEKKDSKKEEAPKKEAPK---PKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPE 907
Query: 175 KKA------KAAAKPKKAT----KSPAKPKAVKP-KAAKPKAAKPKAAKPKAAKAKKAAA 223
K+A K AKPK+ T K P KA +P K A+ K A P+ K KAKK
Sbjct: 908 KEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEE 967
Query: 224 KKK 226
K K
Sbjct: 968 KPK 970
Score = 50.8 bits (120), Expect = 9e-07
Identities = 69/243 (28%), Positives = 96/243 (39%), Gaps = 26/243 (10%)
Query: 6 PAETATPAPVE-KSPAKKKAT----KKAAGAGAAKRKATGPPVSELITKAVAASKERNGL 60
P + +P E KSP K K+ KA K++ PV E + K +
Sbjct: 782 PEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKE--EEKPQEVKVKEPP 839
Query: 61 SLAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAK 120
A +KA A + EK +S+ + K K + + K + +A EA+
Sbjct: 840 KKAEEEKAPATPKTE-EKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAE 898
Query: 121 PKAK-----KAGAAKAKKPAGATPKK----AKKAAGAKKAVKKTPKKAKKPAAAGVKKVA 171
K K K AK + A PK+ AKK KA K+ K A+K AA KK
Sbjct: 899 DKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKA-KEPSKPAEKKEAAPEKKDT 957
Query: 172 KSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPKAAK--------PKAAKPKAAKAKKAAA 223
K K K KPK K+ K + + +KPKA K K +KP + AA
Sbjct: 958 KEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDKAA 1017
Query: 224 KKK 226
K K
Sbjct: 1018 KGK 1020
Score = 45.8 bits (107), Expect = 3e-05
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 15/119 (12%)
Query: 112 KKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVA 171
++A GE + K+ A A A+P+K K+ ++A K+P +AK P K A
Sbjct: 492 EEAEGGEEETKSPPAEEA-------ASPEKEAKSPVKEEA--KSPAEAKSPEKEEAKSPA 542
Query: 172 --KSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPKA--AKPKAAKPKAAKAKKAAAKKK 226
KSP+KAK+ A K+ KSP + K+ + + AK A P+ AK A + K+ A+ K
Sbjct: 543 EVKSPEKAKSPA--KEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAK 599
Score = 44.7 bits (104), Expect = 7e-05
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 16/159 (10%)
Query: 78 KNNSRIKLGLKSLVSKGTLV---QTKGTGASGSFKLNKKAASGEAKPKAKKAGA---AKA 131
K+ +IK+ KS K T++ QT+ T + ++ + E + K ++ G A+
Sbjct: 439 KSEEKIKVVEKS--EKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEG 496
Query: 132 KKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGV--KKVAKSPKKAKAAAKPKKATKS 189
+ +P + A+ K+A ++AK PA A K+ AKSP + K+ P+KA KS
Sbjct: 497 GEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKS---PEKA-KS 552
Query: 190 PAKPKAVKPKAAK-PKAAKPKA-AKPKAAKAKKAAAKKK 226
PAK +A P AK P+ + K+ A+ K+ + K+ AK++
Sbjct: 553 PAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEE 591
>gi|24475863 H1 histone family, member O, oocyte-specific [Homo
sapiens]
Length = 346
Score = 70.9 bits (172), Expect = 9e-13
Identities = 77/275 (28%), Positives = 119/275 (43%), Gaps = 51/275 (18%)
Query: 2 SETAPAETATPAPVEKSPAKKKATKKAAGAGAAKRKATG-------PPVSELITKAVAAS 54
S+ +P+ T+T A +SP +K G + PPV ++ +A+ A
Sbjct: 8 SDISPSSTST-AGSSRSPESEKPGPSHGGVPPGGPSHSSLPVGRRHPPVLRMVLEALQAG 66
Query: 55 KERNGLSLAALKKALAAG--GYDVEKNNSRIKLGLKSLVSKGTLVQ---TKGTGASGSFK 109
++R G S+AA+K + DV + +K L + + +G L + +K GA+GSFK
Sbjct: 67 EQRRGTSVAAIKLYILHKYPTVDVLRFKYLLKQALATGMRRGLLARPLNSKARGATGSFK 126
Query: 110 L---------NKKAASGEAKPKAKKAGAAKAKKPAGATPK-----KAKKAAGAKKAVKKT 155
L +K A A +A +A KKP+ A K KKAA V+K
Sbjct: 127 LVPKHKKKIQPRKMAPATAPRRAGEAKGKGPKKPSEAKEDPPNVGKVKKAAKRPAKVQKP 186
Query: 156 P-------KKAKKPAAAGVKKVAKSPKKAKAAAKPKKATKSPAKPKAVKPKAA------- 201
P +KA+K A A+S + K KP KA ++P+ + KA
Sbjct: 187 PPKPGAATEKARKQGGAAKDTRAQSGEARKVPPKPDKAMRAPSSAGGLSRKAKAKGSRSS 246
Query: 202 -------KPKAAKPKAAKPKAAKAKKAAA---KKK 226
+ A+ K++KP A+K K AA KKK
Sbjct: 247 QGDAEAYRKTKAESKSSKPTASKVKNGAASPTKKK 281
Score = 47.0 bits (110), Expect = 1e-05
Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 29/153 (18%)
Query: 99 TKGTGASGSFKLNKKAASGEAK---PKAKKAGAAKAKKPAGATPKKAK-----KAAGAKK 150
T+ G + +A SGEA+ PK KA +A AG +KAK + G +
Sbjct: 194 TEKARKQGGAAKDTRAQSGEARKVPPKPDKA--MRAPSSAGGLSRKAKAKGSRSSQGDAE 251
Query: 151 AVKKTPKKAK--KPAAAGVKKVAKSPKKAKAAAK----------------PKKATKSPAK 192
A +KT ++K KP A+ VK A SP K K AK P K + S
Sbjct: 252 AYRKTKAESKSSKPTASKVKNGAASPTKKKVVAKAKAPKAGQGPNTKAAAPAKGSGSKVV 311
Query: 193 PKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKK 225
P + K PK + KA P A + K ++++
Sbjct: 312 PAHLSRKTEAPKGPR-KAGLPIKASSSKVSSQR 343
Score = 41.2 bits (95), Expect = 7e-04
Identities = 52/180 (28%), Positives = 70/180 (38%), Gaps = 23/180 (12%)
Query: 12 PAPVEKSPAKKKAT----KKAAGAGAAKRKATG-----PPVSELITKAVAASKERNGLSL 62
PA V+K P K A +K GA R +G PP + KA+ A GLS
Sbjct: 180 PAKVQKPPPKPGAATEKARKQGGAAKDTRAQSGEARKVPPKPD---KAMRAPSSAGGLSR 236
Query: 63 AALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAKPK 122
A K + D E K +S SK T + K AS + KK + PK
Sbjct: 237 KAKAKGSRSSQGDAEAYR---KTKAESKSSKPTASKVKNGAASPT---KKKVVAKAKAPK 290
Query: 123 AKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAK 182
A + KA PA + K A ++K + K P AG+ A S K + A+
Sbjct: 291 AGQGPNTKAAAPAKGSGSKVVPAHLSRKT-----EAPKGPRKAGLPIKASSSKVSSQRAE 345
Score = 33.9 bits (76), Expect = 0.12
Identities = 54/203 (26%), Positives = 77/203 (37%), Gaps = 13/203 (6%)
Query: 13 APVEKSPAKKKATKKAAGA-------GAAKRKATGPPVSELITKAVAASKERNGLSLAAL 65
AP AK K KK + A G K+ A P + A+ E+ A
Sbjct: 145 APRRAGEAKGKGPKKPSEAKEDPPNVGKVKKAAKRPAKVQKPPPKPGAATEKARKQGGAA 204
Query: 66 KKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQ-TKGTGASGSFKLNKKAASGEAKPKAK 124
K A G + K + +++ S G L + K G+ S + +A+ K+
Sbjct: 205 KDTRAQSG-EARKVPPKPDKAMRAPSSAGGLSRKAKAKGSRSSQGDAEAYRKTKAESKSS 263
Query: 125 KAGAAKAKKPAGATPKK--AKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAK 182
K A+K K A + KK KA A KA + KA PA KV + K A
Sbjct: 264 KPTASKVKNGAASPTKKKVVAKAK-APKAGQGPNTKAAAPAKGSGSKVVPAHLSRKTEA- 321
Query: 183 PKKATKSPAKPKAVKPKAAKPKA 205
PK K+ KA K + +A
Sbjct: 322 PKGPRKAGLPIKASSSKVSSQRA 344
>gi|32401437 H1 histone family, member N, testis-specific [Homo
sapiens]
Length = 255
Score = 63.5 bits (153), Expect = 1e-10
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 31/204 (15%)
Query: 19 PAKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGLSLAALKKALAAGGYDVEK 78
PA+K + G ++ + VS+L+ +A++ K GL+LAALKK L GY+V +
Sbjct: 41 PAEKTVGGPSRGCSSSVLR-----VSQLVLQAISTHK---GLTLAALKKELRNAGYEVRR 92
Query: 79 NNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAKPKAKKAGAAKAKKPAGAT 138
+ R + +K TL++ G+ A+G F++ K KP+ +KP A
Sbjct: 93 KSGRHEAPRGQ--AKATLLRVSGSDAAGYFRVWK-----VPKPR---------RKPGRAR 136
Query: 139 PKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAKPKKATKSPAKPKAVKP 198
++ +A A ++ ++ ++P + K+ +KA+ + K+ A +A +
Sbjct: 137 QEEGTRAPWRTPAAPRSSRRRRQP-------LRKAARKAREVWRRNARAKAKANARARRT 189
Query: 199 KAAKPKAAKPKAAKPKAAKAKKAA 222
+ A+P+A +P A+ K AA
Sbjct: 190 RRARPRAKEPPCARAKEEAGATAA 213
Score = 32.3 bits (72), Expect = 0.34
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 18/91 (19%)
Query: 104 ASGSFKLNKKAA-SGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKP 162
A K N +A + A+P+AK+ A+AK+ AGAT G +AVK+
Sbjct: 176 ARAKAKANARARRTRRARPRAKEPPCARAKEEAGATAAD----EGRGQAVKE-------- 223
Query: 163 AAAGVKKVAKSPKKAKAAAKPKKATKSPAKP 193
+S K + ++KP++ + P KP
Sbjct: 224 -----DTTPRSGKDKRRSSKPREEKQEPKKP 249
>gi|111548666 SNF2 histone linker PHD RING helicase isoform a [Homo
sapiens]
Length = 1687
Score = 58.9 bits (141), Expect = 3e-09
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 35 KRKATGPPVSELITKAVAASKERNGLSLAALKKALAA-GGYDVEKNNSRIKLGLKSLVSK 93
K K PP +I AV + G+S+ ++ K +++ YDV++N S +K LK L+ +
Sbjct: 434 KEKVQCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQRNRSLLKRMLKCLIFE 493
Query: 94 GTLVQTKGTGASGSFKLNKKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVK 153
G + Q KG G SG+F L K + K KK +K T K K ++
Sbjct: 494 GLVKQIKGHGFSGTFTLGKNYKEEDICDKTKKQAVGSPRKIQKETRKSGNKDTDSEYLPS 553
Query: 154 KTPK----------KAKKPAAAGVKKVAKSPKKAKA 179
T K+++ + KK+ S KK K+
Sbjct: 554 DTSDDDDDPYYYYYKSRRNRSKLRKKLVPSTKKGKS 589
>gi|27436873 SNF2 histone linker PHD RING helicase isoform b [Homo
sapiens]
Length = 1659
Score = 58.9 bits (141), Expect = 3e-09
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 35 KRKATGPPVSELITKAVAASKERNGLSLAALKKALAA-GGYDVEKNNSRIKLGLKSLVSK 93
K K PP +I AV + G+S+ ++ K +++ YDV++N S +K LK L+ +
Sbjct: 434 KEKVQCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQRNRSLLKRMLKCLIFE 493
Query: 94 GTLVQTKGTGASGSFKLNKKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVK 153
G + Q KG G SG+F L K + K KK +K T K K ++
Sbjct: 494 GLVKQIKGHGFSGTFTLGKNYKEEDICDKTKKQAVGSPRKIQKETRKSGNKDTDSEYLPS 553
Query: 154 KTPK----------KAKKPAAAGVKKVAKSPKKAKA 179
T K+++ + KK+ S KK K+
Sbjct: 554 DTSDDDDDPYYYYYKSRRNRSKLRKKLVPSTKKGKS 589
>gi|55743106 alpha 3 type VI collagen isoform 5 precursor [Homo
sapiens]
Length = 2971
Score = 53.9 bits (128), Expect = 1e-07
Identities = 42/98 (42%), Positives = 49/98 (50%), Gaps = 13/98 (13%)
Query: 120 KPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKA 179
+P K A A KPA A P AK A V+ P A KPA A K VA P A
Sbjct: 2696 QPSVKPAAA----KPAPAKPVAAKPVATKMATVR--PPVAVKPATA-AKPVAAKP----A 2744
Query: 180 AAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAK 217
A +P A + AKP A KP+ +P+AAKP A KP K
Sbjct: 2745 AVRPPAA--AAAKPVATKPEVPRPQAAKPAATKPATTK 2780
Score = 49.3 bits (116), Expect = 3e-06
Identities = 37/104 (35%), Positives = 44/104 (42%), Gaps = 21/104 (20%)
Query: 119 AKPKAKKAGAAK--AKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKK 176
AKP K AAK A K A P A K A A K V P + PAAA K VA
Sbjct: 2704 AKPAPAKPVAAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRPPAAAAAKPVA----- 2758
Query: 177 AKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKK 220
KP+ +P+AAKP A KP KP +++
Sbjct: 2759 --------------TKPEVPRPQAAKPAATKPATTKPMVKMSRE 2788
Score = 44.3 bits (103), Expect = 9e-05
Identities = 33/108 (30%), Positives = 40/108 (37%), Gaps = 21/108 (19%)
Query: 139 PKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKA----KAAAKPKKATKSPAKPK 194
P + + P KP K V + K + + KP A +PAKP
Sbjct: 2653 PNNVTSSPTSNPVTTTKPVTTTKPVTTTTKPVTTTTKPVTIINQPSVKPAAAKPAPAKPV 2712
Query: 195 AVKP-----------------KAAKPKAAKPKAAKPKAAKAKKAAAKK 225
A KP AAKP AAKP A +P AA A K A K
Sbjct: 2713 AAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRPPAAAAAKPVATK 2760
Score = 43.1 bits (100), Expect = 2e-04
Identities = 39/99 (39%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 133 KPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAKPKKATKS-PA 191
KP + + K A AK A K A KP A + V + A KP A K A
Sbjct: 2689 KPVTIINQPSVKPAAAKPAPAKPV--AAKPVATKMATV-----RPPVAVKPATAAKPVAA 2741
Query: 192 KPKAVKP---KAAKPKAAKPKAAKPKAAK--AKKAAAKK 225
KP AV+P AAKP A KP+ +P+AAK A K A K
Sbjct: 2742 KPAAVRPPAAAAAKPVATKPEVPRPQAAKPAATKPATTK 2780
>gi|55743098 alpha 3 type VI collagen isoform 1 precursor [Homo
sapiens]
Length = 3177
Score = 53.9 bits (128), Expect = 1e-07
Identities = 42/98 (42%), Positives = 49/98 (50%), Gaps = 13/98 (13%)
Query: 120 KPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKA 179
+P K A A KPA A P AK A V+ P A KPA A K VA P A
Sbjct: 2902 QPSVKPAAA----KPAPAKPVAAKPVATKMATVR--PPVAVKPATA-AKPVAAKP----A 2950
Query: 180 AAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAK 217
A +P A + AKP A KP+ +P+AAKP A KP K
Sbjct: 2951 AVRPPAA--AAAKPVATKPEVPRPQAAKPAATKPATTK 2986
Score = 49.3 bits (116), Expect = 3e-06
Identities = 37/104 (35%), Positives = 44/104 (42%), Gaps = 21/104 (20%)
Query: 119 AKPKAKKAGAAK--AKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKK 176
AKP K AAK A K A P A K A A K V P + PAAA K VA
Sbjct: 2910 AKPAPAKPVAAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRPPAAAAAKPVA----- 2964
Query: 177 AKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKK 220
KP+ +P+AAKP A KP KP +++
Sbjct: 2965 --------------TKPEVPRPQAAKPAATKPATTKPMVKMSRE 2994
Score = 44.3 bits (103), Expect = 9e-05
Identities = 33/108 (30%), Positives = 40/108 (37%), Gaps = 21/108 (19%)
Query: 139 PKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKA----KAAAKPKKATKSPAKPK 194
P + + P KP K V + K + + KP A +PAKP
Sbjct: 2859 PNNVTSSPTSNPVTTTKPVTTTKPVTTTTKPVTTTTKPVTIINQPSVKPAAAKPAPAKPV 2918
Query: 195 AVKP-----------------KAAKPKAAKPKAAKPKAAKAKKAAAKK 225
A KP AAKP AAKP A +P AA A K A K
Sbjct: 2919 AAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRPPAAAAAKPVATK 2966
Score = 43.1 bits (100), Expect = 2e-04
Identities = 39/99 (39%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 133 KPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAKPKKATKS-PA 191
KP + + K A AK A K A KP A + V + A KP A K A
Sbjct: 2895 KPVTIINQPSVKPAAAKPAPAKPV--AAKPVATKMATV-----RPPVAVKPATAAKPVAA 2947
Query: 192 KPKAVKP---KAAKPKAAKPKAAKPKAAK--AKKAAAKK 225
KP AV+P AAKP A KP+ +P+AAK A K A K
Sbjct: 2948 KPAAVRPPAAAAAKPVATKPEVPRPQAAKPAATKPATTK 2986
>gi|240255535 alpha 3 type VI collagen isoform 4 precursor [Homo
sapiens]
Length = 2570
Score = 53.9 bits (128), Expect = 1e-07
Identities = 42/98 (42%), Positives = 49/98 (50%), Gaps = 13/98 (13%)
Query: 120 KPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKA 179
+P K A A KPA A P AK A V+ P A KPA A K VA P A
Sbjct: 2295 QPSVKPAAA----KPAPAKPVAAKPVATKMATVR--PPVAVKPATA-AKPVAAKP----A 2343
Query: 180 AAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAK 217
A +P A + AKP A KP+ +P+AAKP A KP K
Sbjct: 2344 AVRPPAA--AAAKPVATKPEVPRPQAAKPAATKPATTK 2379
Score = 49.3 bits (116), Expect = 3e-06
Identities = 37/104 (35%), Positives = 44/104 (42%), Gaps = 21/104 (20%)
Query: 119 AKPKAKKAGAAK--AKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKK 176
AKP K AAK A K A P A K A A K V P + PAAA K VA
Sbjct: 2303 AKPAPAKPVAAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRPPAAAAAKPVA----- 2357
Query: 177 AKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKK 220
KP+ +P+AAKP A KP KP +++
Sbjct: 2358 --------------TKPEVPRPQAAKPAATKPATTKPMVKMSRE 2387
Score = 44.3 bits (103), Expect = 9e-05
Identities = 33/108 (30%), Positives = 40/108 (37%), Gaps = 21/108 (19%)
Query: 139 PKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKA----KAAAKPKKATKSPAKPK 194
P + + P KP K V + K + + KP A +PAKP
Sbjct: 2252 PNNVTSSPTSNPVTTTKPVTTTKPVTTTTKPVTTTTKPVTIINQPSVKPAAAKPAPAKPV 2311
Query: 195 AVKP-----------------KAAKPKAAKPKAAKPKAAKAKKAAAKK 225
A KP AAKP AAKP A +P AA A K A K
Sbjct: 2312 AAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRPPAAAAAKPVATK 2359
Score = 43.1 bits (100), Expect = 2e-04
Identities = 39/99 (39%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 133 KPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAKPKKATKS-PA 191
KP + + K A AK A K A KP A + V + A KP A K A
Sbjct: 2288 KPVTIINQPSVKPAAAKPAPAKPV--AAKPVATKMATV-----RPPVAVKPATAAKPVAA 2340
Query: 192 KPKAVKP---KAAKPKAAKPKAAKPKAAK--AKKAAAKK 225
KP AV+P AAKP A KP+ +P+AAK A K A K
Sbjct: 2341 KPAAVRPPAAAAAKPVATKPEVPRPQAAKPAATKPATTK 2379
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 53.9 bits (128), Expect = 1e-07
Identities = 65/226 (28%), Positives = 95/226 (42%), Gaps = 50/226 (22%)
Query: 5 APAETATPAPVE-KSPAKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGLSLA 63
APA +A A V+ KK ++ A AG K + G K A KE
Sbjct: 39 APALSAAAAGVKILGSGDKKLRRQKAAAGGKKARLRGQ-------KGAVAGKEAR----Q 87
Query: 64 ALKKALAAGGYDVEKNNSR--IKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAKP 121
+KA AGG + + G KSL +G + +G K AA+G KP
Sbjct: 88 HWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRG---------QKAAATGSKKP 138
Query: 122 K--AKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVK-KVAKSPKKAK 178
+ A+K+ AA +K + AGA+KA AAAGVK + + P+KA
Sbjct: 139 RWRAQKSAAAGSKN----------RGAGAQKAA----------AAAGVKSQGGEKPQKAA 178
Query: 179 AAAKPKKATKSP----AKPKAVKPKAAKPKAAKPKAAKPKAAKAKK 220
AA ++ K P AK + + K + + AK + K + + KK
Sbjct: 179 AAGAKSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRRKK 224
Score = 53.9 bits (128), Expect = 1e-07
Identities = 64/242 (26%), Positives = 90/242 (37%), Gaps = 40/242 (16%)
Query: 21 KKKATKKAAGAGAAKRKATGPPVSELIT---KAVAASKERNGLSLAALKKALAAGGYDVE 77
KK K A GA R+ G + KA K R G S K L G +
Sbjct: 223 KKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAA 282
Query: 78 KNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKL---NKKAASGEAKP-----KAKKAGAA 129
++ + + G KG G G L N + G KP KA KA AA
Sbjct: 283 LAGAK----RRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAA 338
Query: 130 KAKKPAGATPKKAKKAAGAKKAVKKTPKKAK--KPAAAGVKKVAKSPKKAKAAAKPK--- 184
K+ G K A ++K ++ KK + K +AAG K KK AK +
Sbjct: 339 GTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAKRRGDG 398
Query: 185 -----------KATKSPA---------KPKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAK 224
+A K+PA KP+ PKAAK + K ++ K + + A+
Sbjct: 399 RKKPRWQNPRRRAQKAPAAKPRGGGSKKPRRRGPKAAKSRGGKSRSGGGKKPRRRGQKAR 458
Query: 225 KK 226
+K
Sbjct: 459 QK 460
Score = 49.7 bits (117), Expect = 2e-06
Identities = 59/215 (27%), Positives = 88/215 (40%), Gaps = 27/215 (12%)
Query: 30 GAGAAKRKATGPPVSELITKAVAASKERNGLSLAALKKALAAGGYDVEKNNSRIKLGLKS 89
G G K + G + TKA AA +R G +KA G +K R K +
Sbjct: 319 GRGGKKPRRRG----QKATKAAAAGTKRGG---GGQQKAAVVGVKSRKKQRRRGKKPRRQ 371
Query: 90 LVSKGTLVQTKGTGASGSFKLNKKAASGEAKPK-------AKKAGAAK-----AKKPAGA 137
S +++G G + K+ G KP+ A+KA AAK +KKP
Sbjct: 372 KASAAG-AKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRRR 430
Query: 138 TPKKAK------KAAGAKKAVKKTPKKAKKPAAAGVK-KVAKSPKKAKAAAKPKKATKSP 190
PK AK ++ G KK ++ K +K A AG + + K + KA+A K+
Sbjct: 431 GPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKASAAGTKSRGGG 490
Query: 191 AKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKK 225
K + K + + A+ K AA AK K+
Sbjct: 491 LKSHSGKNLWRRGQKAEAAGEKATAAGAKSRGRKQ 525
Score = 43.9 bits (102), Expect = 1e-04
Identities = 57/210 (27%), Positives = 86/210 (40%), Gaps = 24/210 (11%)
Query: 21 KKKATKKAAGAGAAKRKAT---GPPVSELITKAVA--ASKERNGLSLAALKKALAAGGYD 75
KK +KAAG GA RK G + KA A A+ +G +K AAG
Sbjct: 614 KKAWRQKAAGTGAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAGSES 673
Query: 76 V------EKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAK----PKAKK 125
++ +R K + S+G Q G + + KK G+++ K++
Sbjct: 674 SAAAAVGQEAEARKKPRRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRG 733
Query: 126 AGAAKAKKPAGATPKKAKKAAGAKKAVKKT--PKKAKKPAAAGVKKVAKSPKKAKAAAKP 183
+G AK++ GA K +G K A K+ AK+ G K ++S +KA A
Sbjct: 734 SGGAKSRGSGGA-----KSRSGKKAAASKSHGGGGAKRRRGGGAK--SRSGEKAVTAGGQ 786
Query: 184 KKATKSPAKPKAVKPKAAKPKAAKPKAAKP 213
K A KP VK + + + A KP
Sbjct: 787 KAAAAGGKKPPRVKSRGGRGQKAAAGGKKP 816
Score = 39.7 bits (91), Expect = 0.002
Identities = 65/240 (27%), Positives = 89/240 (37%), Gaps = 32/240 (13%)
Query: 6 PAETATPAPVEKSP--AKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGLSLA 63
P + P + P AK + K +G G R+ + KA A E G
Sbjct: 419 PRGGGSKKPRRRGPKAAKSRGGKSRSGGGKKPRRRG----QKARQKAAEAGAESRGDKKQ 474
Query: 64 ALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAAS-GEAKPK 122
+KA AAG SR GLKS K + + A+G A S G +P+
Sbjct: 475 GRQKASAAG------TKSRGG-GLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRGRKQPR 527
Query: 123 AKKAGAAKAKKPAGATPKKAKKAAGAKKAVK--------------KTPKKAKKPAAAGVK 168
+K A AK G + + ++ A A A P++ + AAA
Sbjct: 528 RQKPAVAGAKSRVGGSKSRQRQKAVAAGATSHGGGGNKQSRGGGGNKPRQWGQTAAAAKT 587
Query: 169 KVA--KSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKKK 226
+ K P KAAA K+ KA + KAA A K KP K AAA +K
Sbjct: 588 RGGGDKQPGWQKAAAGVTKSRSGDGGKKAWRQKAAGTGAKSRK--KPWRRGQKDAAAAEK 645
Score = 39.7 bits (91), Expect = 0.002
Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 24 ATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGLSLAALK-KALAAGGYDVEKNNSR 82
A +KA AGA R P + AVA +K R G S + + KA+AAG ++
Sbjct: 509 AGEKATAAGAKSRGRKQPRRQK---PAVAGAKSRVGGSKSRQRQKAVAAGATSHGGGGNK 565
Query: 83 IKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAKPKAKKA--GAAKAKKPAGATPK 140
G G + G A+ + K G+ +P +KA G K++ G
Sbjct: 566 QSRG-----GGGNKPRQWGQTAAAA----KTRGGGDKQPGWQKAAAGVTKSRSGDGGKKA 616
Query: 141 KAKKAAG-AKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAKPKKATKSPAKPKAVKPK 199
+KAAG K+ KK ++ +K AAA K A + K + K A
Sbjct: 617 WRQKAAGTGAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAGSESSAA 676
Query: 200 AAKPKAAKPKAAKPKAAKAK 219
AA + A+ + KP+ +AK
Sbjct: 677 AAVGQEAEAR-KKPRRRRAK 695
Score = 34.7 bits (78), Expect = 0.068
Identities = 41/141 (29%), Positives = 53/141 (37%), Gaps = 30/141 (21%)
Query: 115 ASGEAKPKAKKAGAAKAKKPA-----GATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKK 169
A+G A P A GAA A+ P A P + AAG K K ++ AAAG KK
Sbjct: 12 AAGRAGPGAP-LGAALARTPVELAAESAAPALSAAAAGVKILGSGDKKLRRQKAAAGGKK 70
Query: 170 VAKSPKKAKAAAK---------------------PKKATKSPAKP---KAVKPKAAKPKA 205
+K A K +KA + K + KP+ KA
Sbjct: 71 ARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRGQKA 130
Query: 206 AKPKAAKPKAAKAKKAAAKKK 226
A + KP+ K AAA K
Sbjct: 131 AATGSKKPRWRAQKSAAAGSK 151
Score = 32.3 bits (72), Expect = 0.34
Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 20/124 (16%)
Query: 21 KKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGLSLAALKKALAAGGYDVEKNN 80
KK K+ G G AK + +G S + +K R+G AA K G
Sbjct: 716 KKPRLGKSRGGGGAKSRGSGGAKS----RGSGGAKSRSGKKAAASKSHGGGGAKRRRGGG 771
Query: 81 SRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAKPKAKKAGAAKAKKPAGATPK 140
++ + G K++ + G K AA+G KP K+ + +K A K
Sbjct: 772 AKSRSGEKAVTAGG----------------QKAAAAGGKKPPRVKSRGGRGQKAAAGGKK 815
Query: 141 KAKK 144
++
Sbjct: 816 PLRR 819
>gi|153070260 myristoylated alanine-rich protein kinase C substrate
[Homo sapiens]
Length = 332
Score = 53.9 bits (128), Expect = 1e-07
Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 12/224 (5%)
Query: 5 APAETATP----APVEKSPAKKKATKKAAGAGAAKRKATGPPVSEL-ITKAVAASKERNG 59
AP A+P AP E A+ + A G A+ +T P +E T + + +
Sbjct: 95 APEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKK 154
Query: 60 LSLAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEA 119
+ KK+ G+ +KN G ++ + + G + + AASGE
Sbjct: 155 KKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQ 214
Query: 120 KPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKA 179
+ AA + AG P++AK A A +K P + AA KV + KKA+
Sbjct: 215 AAAPGEEAAAGEEGAAGGDPQEAKPQEAA-VAPEKPPASDETKAAEEPSKVEE--KKAEE 271
Query: 180 AAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAAA 223
A A ++P+ A P A + A P A +P AA A A A
Sbjct: 272 AGASAAACEAPS---AAGPGAPPEQEAAP-AEEPAAAAASSACA 311
Score = 50.1 bits (118), Expect = 2e-06
Identities = 70/250 (28%), Positives = 96/250 (38%), Gaps = 38/250 (15%)
Query: 3 ETAPAETATPAPVE-----KSPAKKKATKKAAGAGAAKRKAT--GPPVSELITKAVAASK 55
+ +PA + A E +PA K AAG+GAA A G P + +A A+
Sbjct: 44 DASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPV 103
Query: 56 ERN----------GLSLAALKKALAAG----------GYDVEKNNSRIKLGLKSLVSKGT 95
E+ G AA +A +A G +N K K K
Sbjct: 104 EKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFK-- 161
Query: 96 LVQTKGTGASG-SFKLNKKAA--SGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAV 152
K SG SFK NKK A GEA+ A + G +A A A +A A+G + A
Sbjct: 162 ----KSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAA 217
Query: 153 KKTPKKAKKPAAAGVKKVAKSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAK 212
A + AAG P+ +AA P+K S A +P + K A+ A
Sbjct: 218 PGEEAAAGEEGAAGGDPQEAKPQ--EAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGAS 275
Query: 213 PKAAKAKKAA 222
A +A AA
Sbjct: 276 AAACEAPSAA 285
Score = 44.3 bits (103), Expect = 9e-05
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Query: 116 SGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKK--PAAAGVKKVAKS 173
+G+A P A ++GA + + G+ P K+ A + +P A+K PAAA + S
Sbjct: 42 NGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGAS 101
Query: 174 PKKAKAAAKPKKATKSPAKPKAVKPKAAK--PKAAKPKAAKPKAAKAKKAAAKKK 226
P + +A A+ + A P P A + +AA + PKA KKK
Sbjct: 102 PVEKEAPAEGEAA--EPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKK 154
Score = 42.0 bits (97), Expect = 4e-04
Identities = 55/205 (26%), Positives = 78/205 (38%), Gaps = 21/205 (10%)
Query: 10 ATPAPVEKSPAKKKA------TKKAAGAGAAKRKATGPPVSELITKAVAASK-ERNGLSL 62
ATP+P ++P KKK + K +G K K E A K E G +
Sbjct: 142 ATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAA 201
Query: 63 AALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAKPK 122
AA +A AA G G + G ++AA KP
Sbjct: 202 AAAAEAGAASGEQAAAPGEEAAAG-----------EEGAAGGDPQEAKPQEAAVAPEKPP 250
Query: 123 AKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAK 182
A A A++P+ KKA++A GA A + P A P A ++ A + + A AAA
Sbjct: 251 ASDETKA-AEEPSKVEEKKAEEA-GASAAACEAPSAAG-PGAPPEQEAAPAEEPAAAAAS 307
Query: 183 PKKATKSPAKPKAVKPKAAKPKAAK 207
A S P+A +AA+
Sbjct: 308 SACAAPSQEAQPECSPEAPPAEAAE 332
Score = 33.1 bits (74), Expect = 0.20
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 40 GPPVSELITKAVAASKERNGLSLAALKKALAAGGYDVEKNNSRIKLG---LKSLVSKGTL 96
G S+ K AA+ ER G + A + A G + N +K+ + G
Sbjct: 2 GAQFSKTAAKGEAAA-ERPGEAAVASSPSKANG-----QENGHVKVNGDASPAAAESGAK 55
Query: 97 VQTKGTGASGSFKLNKKAASGEAKPKAKKAGAAKAKKP-------AGATPKKAKKAAGAK 149
+ + G++ + + AA+G A AA+ +P AGA+P + + A +
Sbjct: 56 EELQANGSAPAADKEEPAAAGSG---AASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGE 112
Query: 150 KAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAKPKKATKSPAKPK 194
A +P A+ AA+ + S KA+ A P + ++P K K
Sbjct: 113 AAEPGSPTAAEGEAASAAS--STSSPKAEDGATPSPSNETPKKKK 155
Score = 33.1 bits (74), Expect = 0.20
Identities = 35/136 (25%), Positives = 51/136 (37%), Gaps = 9/136 (6%)
Query: 98 QTKGTGASGSFKLNK--KAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKT 155
Q T A G + +AA + KA K A+P A+ A + +
Sbjct: 4 QFSKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGS 63
Query: 156 PKKAKKPAAAGVKKVAKSPKKAK-----AAAKPKKATKSPAKPKAVKPKAAKPKAAKPKA 210
A K A A SP A+ AAA P+ K + +AA+P P A
Sbjct: 64 APAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEP--GSPTA 121
Query: 211 AKPKAAKAKKAAAKKK 226
A+ +AA A + + K
Sbjct: 122 AEGEAASAASSTSSPK 137
>gi|78000183 ribosomal protein L14 [Homo sapiens]
Length = 215
Score = 51.2 bits (121), Expect = 7e-07
Identities = 36/87 (41%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 140 KKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSP-KKAKAAAKPKKATKSPAKPKAVKP 198
KK +KAA K + KK P AAA AK P KK AA+K A K PA+ +
Sbjct: 128 KKLQKAALLKASPKKAPGTKGTAAAAAAAAAAKVPAKKITAASKKAPAQKVPAQKATGQK 187
Query: 199 KAAKPKAAKPKAAKPKAAKAKKAAAKK 225
A PKA K + A + A A KA+ KK
Sbjct: 188 AAPAPKAQKGQKAPAQKAPAPKASGKK 214
Score = 43.1 bits (100), Expect = 2e-04
Identities = 38/101 (37%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 109 KLNKKAASGEAKPKAKKAGAAKA--KKPAGA--TPKKAKKAAGAKKAVKKTPKKAKKPAA 164
K+ + E K K +KA KA KK G T A AA AK KK +KK A
Sbjct: 117 KMRNRIIKNEVK-KLQKAALLKASPKKAPGTKGTAAAAAAAAAAKVPAKKITAASKKAPA 175
Query: 165 AGVKKVAKSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPKA 205
V + +KA A K +K K+PA+ KA PKA+ KA
Sbjct: 176 QKVPAQKATGQKAAPAPKAQKGQKAPAQ-KAPAPKASGKKA 215
Score = 38.9 bits (89), Expect = 0.004
Identities = 41/118 (34%), Positives = 48/118 (40%), Gaps = 10/118 (8%)
Query: 112 KKAASGEAKPKAK---KAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVK 168
KK + E K K + KAKK K K +K +PKKA P G
Sbjct: 93 KKIEARERKAKMTDFDRFKVMKAKKMRNRIIKNEVKKLQKAALLKASPKKA--PGTKGTA 150
Query: 169 KVAKSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAA-KPKAAKAKKAAAKK 225
A A AAAK + A KA K KA KAA PKA K +KA A+K
Sbjct: 151 AAAA----AAAAAKVPAKKITAASKKAPAQKVPAQKATGQKAAPAPKAQKGQKAPAQK 204
Score = 37.4 bits (85), Expect = 0.011
Identities = 40/115 (34%), Positives = 46/115 (40%), Gaps = 13/115 (11%)
Query: 125 KAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAK------SPKKAK 178
K A + K A +KAK + V K K + VKK+ K SPKKA
Sbjct: 85 KWAATRWAKKIEARERKAKMTDFDRFKVMKAKKMRNRIIKNEVKKLQKAALLKASPKKAP 144
Query: 179 ------AAAKPKKATKSPAKP-KAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKKK 226
AAA A K PAK A KA K KA KAA A KA +K
Sbjct: 145 GTKGTAAAAAAAAAAKVPAKKITAASKKAPAQKVPAQKATGQKAAPAPKAQKGQK 199
>gi|78000181 ribosomal protein L14 [Homo sapiens]
Length = 215
Score = 51.2 bits (121), Expect = 7e-07
Identities = 36/87 (41%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 140 KKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSP-KKAKAAAKPKKATKSPAKPKAVKP 198
KK +KAA K + KK P AAA AK P KK AA+K A K PA+ +
Sbjct: 128 KKLQKAALLKASPKKAPGTKGTAAAAAAAAAAKVPAKKITAASKKAPAQKVPAQKATGQK 187
Query: 199 KAAKPKAAKPKAAKPKAAKAKKAAAKK 225
A PKA K + A + A A KA+ KK
Sbjct: 188 AAPAPKAQKGQKAPAQKAPAPKASGKK 214
Score = 43.1 bits (100), Expect = 2e-04
Identities = 38/101 (37%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 109 KLNKKAASGEAKPKAKKAGAAKA--KKPAGA--TPKKAKKAAGAKKAVKKTPKKAKKPAA 164
K+ + E K K +KA KA KK G T A AA AK KK +KK A
Sbjct: 117 KMRNRIIKNEVK-KLQKAALLKASPKKAPGTKGTAAAAAAAAAAKVPAKKITAASKKAPA 175
Query: 165 AGVKKVAKSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPKA 205
V + +KA A K +K K+PA+ KA PKA+ KA
Sbjct: 176 QKVPAQKATGQKAAPAPKAQKGQKAPAQ-KAPAPKASGKKA 215
Score = 38.9 bits (89), Expect = 0.004
Identities = 41/118 (34%), Positives = 48/118 (40%), Gaps = 10/118 (8%)
Query: 112 KKAASGEAKPKAK---KAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVK 168
KK + E K K + KAKK K K +K +PKKA P G
Sbjct: 93 KKIEARERKAKMTDFDRFKVMKAKKMRNRIIKNEVKKLQKAALLKASPKKA--PGTKGTA 150
Query: 169 KVAKSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAA-KPKAAKAKKAAAKK 225
A A AAAK + A KA K KA KAA PKA K +KA A+K
Sbjct: 151 AAAA----AAAAAKVPAKKITAASKKAPAQKVPAQKATGQKAAPAPKAQKGQKAPAQK 204
Score = 37.4 bits (85), Expect = 0.011
Identities = 40/115 (34%), Positives = 46/115 (40%), Gaps = 13/115 (11%)
Query: 125 KAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAK------SPKKAK 178
K A + K A +KAK + V K K + VKK+ K SPKKA
Sbjct: 85 KWAATRWAKKIEARERKAKMTDFDRFKVMKAKKMRNRIIKNEVKKLQKAALLKASPKKAP 144
Query: 179 ------AAAKPKKATKSPAKP-KAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKKK 226
AAA A K PAK A KA K KA KAA A KA +K
Sbjct: 145 GTKGTAAAAAAAAAAKVPAKKITAASKKAPAQKVPAQKATGQKAAPAPKAQKGQK 199
>gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo
sapiens]
Length = 1158
Score = 50.8 bits (120), Expect = 9e-07
Identities = 42/115 (36%), Positives = 53/115 (46%), Gaps = 13/115 (11%)
Query: 118 EAKPKAKKA--GAAKAKKP--AGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKS 173
E P+ +KA G K+P A P + K G K K PK K+ ++ +
Sbjct: 61 EPTPRVRKAQAGGKPGKRPGTAAEVPPEKTKDKGKKGKKDKGPKVPKE----SLEGSPRP 116
Query: 174 PKKAKAAAKPKKATKSPAK--PKAVK-PKAAKPKAAKPKAAKPKAAKAKKAAAKK 225
PKK K KP KATK P + PKA K PK PKA K KP A K + K+
Sbjct: 117 PKKGKE--KPPKATKKPKEKPPKATKKPKEKPPKATKKPKEKPPKATKKPPSGKR 169
Score = 45.1 bits (105), Expect = 5e-05
Identities = 38/102 (37%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Query: 130 KAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAKPKKATK- 188
+A P TP+ K AG K K P A + K K KK K PK++ +
Sbjct: 55 EAPPPPEPTPRVRKAQAGGKPG--KRPGTAAEVPPEKTKDKGKKGKKDKGPKVPKESLEG 112
Query: 189 SPAKPKAVK---PKAAK-PKAAKPKAAKPKAAKAKKAAAKKK 226
SP PK K PKA K PK PKA K K KA K K
Sbjct: 113 SPRPPKKGKEKPPKATKKPKEKPPKATKKPKEKPPKATKKPK 154
Score = 42.7 bits (99), Expect = 3e-04
Identities = 38/106 (35%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 112 KKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAK-KPAAAGVKKV 170
+ + E P+ K K KK G PK K++ + + PKK K KP A K
Sbjct: 78 RPGTAAEVPPEKTKDKGKKGKKDKG--PKVPKESL---EGSPRPPKKGKEKPPKATKKPK 132
Query: 171 AKSPKKA-KAAAKPKKATKSPAKPKAVKPKAAK--PKAAKPKAAKP 213
K PK K KP KATK KPK PKA K P +P P
Sbjct: 133 EKPPKATKKPKEKPPKATK---KPKEKPPKATKKPPSGKRPPILAP 175
Score = 36.2 bits (82), Expect = 0.023
Identities = 29/101 (28%), Positives = 37/101 (36%), Gaps = 9/101 (8%)
Query: 98 QTKGTGASGSF----KLNKKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVK 153
+TK G G K+ K++ G +P K K K P K K KK +
Sbjct: 89 KTKDKGKKGKKDKGPKVPKESLEGSPRPPKK----GKEKPPKATKKPKEKPPKATKKPKE 144
Query: 154 KTPKKAKKPAAAGVKKVAKSPK-KAKAAAKPKKATKSPAKP 193
K PK KKP K K P K P + + P P
Sbjct: 145 KPPKATKKPKEKPPKATKKPPSGKRPPILAPSETLEWPLPP 185
Score = 29.6 bits (65), Expect = 2.2
Identities = 27/117 (23%), Positives = 38/117 (32%), Gaps = 3/117 (2%)
Query: 77 EKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAKPKAKKAGAAKAKKPAG 136
EK + K G K KG V + S K +A K K+ KKP
Sbjct: 88 EKTKDKGKKGKKD---KGPKVPKESLEGSPRPPKKGKEKPPKATKKPKEKPPKATKKPKE 144
Query: 137 ATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAKPKKATKSPAKP 193
PK KK K P K+P + + P + P++ + P
Sbjct: 145 KPPKATKKPKEKPPKATKKPPSGKRPPILAPSETLEWPLPPPPSPGPEELPQEGGAP 201
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 50.1 bits (118), Expect = 2e-06
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 6/115 (5%)
Query: 118 EAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKK---TP-KKAKKPAAAGVKKVAKS 173
+ KPKA K K + KK +K K+ KK TP KK +KP VKK K
Sbjct: 627 DVKPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKK 686
Query: 174 PKKAKAAAKPKKATKSPAKPKAVKPKAAK--PKAAKPKAAKPKAAKAKKAAAKKK 226
K + +PKK K PK VK + K K K + +PK K KK
Sbjct: 687 EIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKK 741
Score = 50.1 bits (118), Expect = 2e-06
Identities = 43/123 (34%), Positives = 54/123 (43%), Gaps = 9/123 (7%)
Query: 109 KLNKKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKK-AKKPAAAGV 167
K +K E K + KK + KK KK KK VKK KK KK
Sbjct: 670 KKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPK 729
Query: 168 KKVAKSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPK----AAKPKAAKAKKAAA 223
K++ K PK AK ++ P K KP A+KPK K + + K A KPK K K
Sbjct: 730 KEIKKLPKDAKKSSTPLSEAK---KPAALKPKVPKKEESVKKDSVAAGKPK-EKGKIKVI 785
Query: 224 KKK 226
KK+
Sbjct: 786 KKE 788
Score = 49.7 bits (117), Expect = 2e-06
Identities = 43/121 (35%), Positives = 51/121 (42%), Gaps = 11/121 (9%)
Query: 109 KLNKKAASGEAKPK---AKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAA 165
K +K E KPK KK + KK PKK K K VKK KK +K
Sbjct: 663 KEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKE-- 720
Query: 166 GVKKVAKSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKK 225
VKK K PKK + KK K K +A KP A KPK K + + K + A
Sbjct: 721 -VKKEEKEPKK-----EIKKLPKDAKKSSTPLSEAKKPAALKPKVPKKEESVKKDSVAAG 774
Query: 226 K 226
K
Sbjct: 775 K 775
Score = 46.6 bits (109), Expect = 2e-05
Identities = 42/119 (35%), Positives = 49/119 (41%), Gaps = 13/119 (10%)
Query: 118 EAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKA 177
E K K KK A K K +K KK KK VKK KK +K K PK+
Sbjct: 651 EEKEKPKKEVAKKEDKTPIKKEEKPKKEE-VKKEVKKEIKKEEKKEPKKEVKKETPPKEV 709
Query: 178 KAAAKP------KKATKSPAKPKAVKPKAAK------PKAAKPKAAKPKAAKAKKAAAK 224
K K KK K P K PK AK +A KP A KPK K +++ K
Sbjct: 710 KKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKKPAALKPKVPKKEESVKK 768
Score = 42.4 bits (98), Expect = 3e-04
Identities = 40/131 (30%), Positives = 55/131 (41%), Gaps = 13/131 (9%)
Query: 109 KLNKKAASGEA-KPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPK-----KAKKP 162
KL ++A S E+ KP AK + +K + + K +K K K K KP
Sbjct: 534 KLKQRADSRESLKPAAKPLPSKSVRKESKEETPEVTKVNHVEKPPKVESKEKVMVKKDKP 593
Query: 163 AAAGVK-KVAKSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPKA------AKPKAAKPKA 215
K V + +K P KA + + VKPKAAK K KP+ K +
Sbjct: 594 IKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKKEEK 653
Query: 216 AKAKKAAAKKK 226
K KK AKK+
Sbjct: 654 EKPKKEVAKKE 664
Score = 40.0 bits (92), Expect = 0.002
Identities = 62/223 (27%), Positives = 86/223 (38%), Gaps = 30/223 (13%)
Query: 2 SETAPAETAT-------PAPVEKSPAKKKATK---KAAGAGAAKRKATGPPVSELITKAV 51
+ET P+ T P+PV+ A+K+AT KAA K++ P + K
Sbjct: 596 TETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKKEEKEK 655
Query: 52 AASKERNGLSLAALKKALAAGGYDVEKN-NSRIKLGLKSLVSKGTLVQTKGTGASGSFKL 110
+ +KK +V+K IK K K +T K
Sbjct: 656 PKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKK 715
Query: 111 NKK--AASGEAKPK---------AKKAGA--AKAKKPAGATPKKAKKAAGAKKAVKKTPK 157
+K E +PK AKK+ ++AKKPA PK KK +++VKK
Sbjct: 716 EEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKKPAALKPKVPKK----EESVKKDSV 771
Query: 158 KAKKPAAAGVKKVAKSPKKAKAAAKPKKATKSPAKPKAVKPKA 200
A KP G KV K K+ KAA A + A AV A
Sbjct: 772 AAGKPKEKGKIKVIK--KEGKAAEAVAAAVGTGATTAAVMAAA 812
Score = 40.0 bits (92), Expect = 0.002
Identities = 35/126 (27%), Positives = 50/126 (39%), Gaps = 17/126 (13%)
Query: 87 LKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAA 146
LK + + T + GT S + K + G++KP A + KPAG K +
Sbjct: 2235 LKKDLKEKTKTKKPGTKTKSSSPVKK--SDGKSKP------LAASPKPAGLKESSDKVSR 2286
Query: 147 GAKKAVKKTPKKAKKPAAAGVKKVAKSPKK---------AKAAAKPKKATKSPAKPKAVK 197
A K++ +KA KP K A+ +K A A+ K AT P K K
Sbjct: 2287 VASPKKKESVEKAAKPTTTPEVKAARGEEKDKETKNAANASASKSAKTATAGPGTTKTTK 2346
Query: 198 PKAAKP 203
A P
Sbjct: 2347 SSAVPP 2352
Score = 39.7 bits (91), Expect = 0.002
Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 130 KAKKPAGATPKKA--KKAAGAKKAVKKTPKKAK-KPAAAGVKKVAKSPKKAKA---AAKP 183
K KKP T + KK+ G K + +PK A K ++ V +VA SPKK ++ AAKP
Sbjct: 2244 KTKKPGTKTKSSSPVKKSDGKSKPLAASPKPAGLKESSDKVSRVA-SPKKKESVEKAAKP 2302
Query: 184 K-----KATKSPAKPKAVK--PKAAKPKAAKPKAAKPKAAKAKKAAA 223
KA + K K K A+ K+AK A P K K++A
Sbjct: 2303 TTTPEVKAARGEEKDKETKNAANASASKSAKTATAGPGTTKTTKSSA 2349
Score = 38.5 bits (88), Expect = 0.005
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 150 KAVKKTPKKAKKPAAAGVKKVAKSP-KKAKAAAKPKKATKSPAKPKAVKPKAAKPKAAKP 208
KA+KK K+ K G K + SP KK+ +KP A+ PA K K ++ + K
Sbjct: 2233 KALKKDLKEKTKTKKPGTKTKSSSPVKKSDGKSKPLAASPKPAGLKESSDKVSRVASPKK 2292
Query: 209 KAAKPKAAK 217
K + KAAK
Sbjct: 2293 KESVEKAAK 2301
>gi|239758117 PREDICTED: hypothetical protein [Homo sapiens]
Length = 465
Score = 49.3 bits (116), Expect = 3e-06
Identities = 60/197 (30%), Positives = 80/197 (40%), Gaps = 18/197 (9%)
Query: 21 KKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGLSLAAL--KKAL-----AAGG 73
K+ +KAA AGA R G KA A + G + +L KK AAG
Sbjct: 150 KQPRRQKAAVAGAKSRGGEGKKPQRRGQKAATAGAKSRGGGVRSLGGKKMRRGQKGAAGA 209
Query: 74 YDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAKPKAKKAGAAKAKK 133
+ G K+ S G QT A+ K KK K A AA K
Sbjct: 210 KRCGGGKQPRRRGQKASKSGGVRCQTPQKAAAQGVKSRKKLRQRGQKAAAAGQEAAAGKT 269
Query: 134 PAGATPKKAKKAAGAKKAVKKTPK-KAKKPAAAGVKKVAKSPKKAKAAAKPKKATKSPAK 192
G K + G KK ++K + + +K AAAG KK P+KA AA ++ K +
Sbjct: 270 CGGGGEKH--RGGGDKKPLRKNSRWRGQKAAAAGGKK----PQKAAAAGGERR--KKLRR 321
Query: 193 PKAVKPKAAKPKAAKPK 209
KA +A PK KP+
Sbjct: 322 QKAAVARAKSPK--KPR 336
Score = 45.4 bits (106), Expect = 4e-05
Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 29/233 (12%)
Query: 23 KATKKAAGAGAAKRKATG-------PPVSELITKA-----VAASKERNGLSLAALKKALA 70
+A +++ A AA+ ++TG PP E T++ ++ R+G + +
Sbjct: 86 RAQRRSIQAAAAQEQSTGRGCLGKEPPSQESWTRSDPRRCLSQDAVRSGSRVCRSRPQTR 145
Query: 71 AGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKA---ASGEAKPKAKKAG 127
GG + G KS +G Q +G A+ + ++ + G K + + G
Sbjct: 146 GGGGKQPRRQKAAVAGAKSRGGEGKKPQRRGQKAATAGAKSRGGGVRSLGGKKMRRGQKG 205
Query: 128 AAKAKKPAGAT-PKKAKKAAGAKKAVK-KTPKKAKKPAAAGVKKVAKSPKKAKAAAKPKK 185
AA AK+ G P++ + A V+ +TP+KA KK+ + +KA AA +
Sbjct: 206 AAGAKRCGGGKQPRRRGQKASKSGGVRCQTPQKAAAQGVKSRKKLRQRGQKAAAAGQEAA 265
Query: 186 ATKS------------PAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKKK 226
A K+ KP + KAA KP+ A A +KK
Sbjct: 266 AGKTCGGGGEKHRGGGDKKPLRKNSRWRGQKAAAAGGKKPQKAAAAGGERRKK 318
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 49.3 bits (116), Expect = 3e-06
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 109 KLNKKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVK 168
+++K + KP+ K K+ K +K KKA K +K +K K
Sbjct: 142 EIHKDKTEKQEKPERKIQTKVTHKEKEKGKEKVREKEKPEKKATHK--EKIEKKEKPETK 199
Query: 169 KVAKSPKKAKAAAKPKKATKSPAK---PKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKK 225
+AK KKAK A K ++ TK K + VK AAK K + +KPK + K+ AA
Sbjct: 200 TLAKEQKKAKTAEKSEEKTKKEVKGGKQEKVKQTAAKVKEVQKTPSKPKEKEDKEKAAVS 259
Query: 226 K 226
K
Sbjct: 260 K 260
Score = 45.4 bits (106), Expect = 4e-05
Identities = 62/241 (25%), Positives = 88/241 (36%), Gaps = 22/241 (9%)
Query: 2 SETAPAETATPAPVEKSPAKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGLS 61
++T E EKS K K K+ G K K T V E + K + KE+
Sbjct: 198 TKTLAKEQKKAKTAEKSEEKTK--KEVKGGKQEKVKQTAAKVKE-VQKTPSKPKEKEDKE 254
Query: 62 LAALKKALAAGGYDVEKN------NSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAA 115
AA+ K Y + + +K G + + S L +K
Sbjct: 255 KAAVSKHEQKDQYAFCRYMIDIFVHGDLKPGQSPAIPPPLPTEQASRPTPASPALEEK-- 312
Query: 116 SGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPK 175
GE K KK + KK KK++K A KK P KA + VK A++
Sbjct: 313 EGEKKKAEKKVTSETKKKEKEDIKKKSEKET-AIDVEKKEPGKASETKQGTVKIAAQAAA 371
Query: 176 KAKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAK----------PKAAKAKKAAAKK 225
K + K TK PA+ + K K + K + AK K KAK AK+
Sbjct: 372 KKDEKKEDSKKTKKPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPSDKQVKAKTERAKE 431
Query: 226 K 226
+
Sbjct: 432 E 432
Score = 44.3 bits (103), Expect = 9e-05
Identities = 63/238 (26%), Positives = 91/238 (38%), Gaps = 24/238 (10%)
Query: 8 ETATPAPVEKSPAKK--KATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGLSLAAL 65
+T PA VE+ KK K K A + K++ + P ++ K A +E +S+
Sbjct: 382 KTKKPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPSDKQVKAKTERAKEEIGAVSI--- 438
Query: 66 KKALAAGGYD-----VEKNNSRIKLGLKSLVSKGTL-VQTKGTGASGSFKLNK------- 112
KKA+ + VE+ + K G S + K ++ K S K +
Sbjct: 439 KKAVPGKKEEKTTKTVEQEIRKEKSGKTSSILKDKEPIKGKEEKVPASLKEKEPETKKDE 498
Query: 113 --KAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKV 170
A E KPK + K +KP K+AK A K + K + + K
Sbjct: 499 KMSKAGKEVKPKPPQLQGKKEEKPEPQIKKEAKPAISEKVQIHKQDIVKPEKTVSHGKPE 558
Query: 171 AKSPKKAKAAAKPKKATKSPAKPKAVKPKAAKP--KAAKPKAAKPKAAKAKKAAAKKK 226
K K+ KA K A P K KA + P K KPK PK + KKK
Sbjct: 559 EKVLKQVKAVTIEKTAKPKPTK-KAEHREREPPSIKTDKPKPT-PKGTSEVTESGKKK 614
Score = 41.2 bits (95), Expect = 7e-04
Identities = 41/113 (36%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 112 KKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKK-TPKKAKKPAAAGVKKV 170
KK + E +K KA + T K A +AA AKK KK KK KKPA K
Sbjct: 336 KKKSEKETAIDVEKKEPGKASETKQGTVKIAAQAA-AKKDEKKEDSKKTKKPAEVEQPKG 394
Query: 171 AKSPKKAK---AAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKK 220
K KK K A PKK P+ K VK K + K + KA KK
Sbjct: 395 KKQEKKEKHVEPAKSPKKEHSVPS-DKQVKAKTERAKEEIGAVSIKKAVPGKK 446
Score = 30.4 bits (67), Expect = 1.3
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 23/164 (14%)
Query: 73 GYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAKPKA-KKAGAAKA 131
G EK +IK K +S+ + + K K + G+ + K K+ A
Sbjct: 516 GKKEEKPEPQIKKEAKPAISEKVQIHKQDI-----VKPEKTVSHGKPEEKVLKQVKAVTI 570
Query: 132 KKPAGATPKKAKKAAGAKK--------AVKKTPKKAKKPAAAGVKKVAKSPKKAKAAA-- 181
+K A PK KKA ++ K TPK + +G KK S K++K A
Sbjct: 571 EKTA--KPKPTKKAEHREREPPSIKTDKPKPTPKGTSEVTESGKKKTEISEKESKEKADM 628
Query: 182 ----KPKKATKSPAKPKAVKPKAAKP-KAAKPKAAKPKAAKAKK 220
+ K +T+ + KA KP + +K P + KAK+
Sbjct: 629 KHLREEKVSTRKESLQLHNVTKAEKPARVSKDVEDVPASKKAKE 672
>gi|56676330 HP1-BP74 [Homo sapiens]
Length = 553
Score = 48.9 bits (115), Expect = 3e-06
Identities = 59/233 (25%), Positives = 91/233 (39%), Gaps = 16/233 (6%)
Query: 8 ETATPAPVEKSPAKKKATKKAAGAGAAKRKATGPPVSE-----LITKAVAASKERNGLSL 62
+ A VE+ ++ K A+G K+ P + I A+AA E S
Sbjct: 302 KNALQRAVERGQLEQITGKGASGTFQLKKSGEKPLLGGSLMEYAILSAIAAMNEPKTCST 361
Query: 63 AALKKALAAGGYDVEKNNSR--IKLGLKSLVSKGTLVQTKGTGASGSFKL--NKKAASGE 118
ALKK + N +K L+ G + Q G G SG+F+L + G
Sbjct: 362 TALKKYVLENHPGTNSNYQMHLLKKTLQKCEKNGWMEQISGKGFSGTFQLCFPYYPSPGV 421
Query: 119 AKPKAKKAGAA---KAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPA-AAGVKKVAKSP 174
PK + + + + + + ++ ++ KKTP AK P AA VK+ P
Sbjct: 422 LFPKKEPDDSRDEDEDEDESSEEDSEDEEPPPKRRLQKKTP--AKSPGKAASVKQRGSKP 479
Query: 175 KKAKAAAKPKKATKSPAK-PKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKKK 226
+AA+ KA P K P K A K + + KP +KK A +
Sbjct: 480 APKVSAAQRGKARPLPKKAPPKAKTPAKKTRPSSTVIKKPSGGSSKKPATSAR 532
Score = 47.4 bits (111), Expect = 1e-05
Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 41 PPVSELITKAVAASKERNGLSLAALKKALAAG--GYDVEKNNSRIKLGLKSLVSKGTLVQ 98
P + ++T+A+ A +++G S+ A++K + ++E+ +K LK +++G + Q
Sbjct: 159 PKMDAILTEAIKACFQKSGASVVAIRKYIIHKYPSLELERRGYLLKQALKRELNRGVIKQ 218
Query: 99 TKGTGASGSFKLNKKAASGEAKPKAKK 125
KG GASGSF + +K+ K + +K
Sbjct: 219 VKGKGASGSFVVVQKSRKTPQKSRNRK 245
Score = 37.4 bits (85), Expect = 0.011
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 113 KAASGE---AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKK 169
KAAS + +KP K + A + K A PKKA A KTP K +P++ +KK
Sbjct: 468 KAASVKQRGSKPAPKVSAAQRGK--ARPLPKKAPPKA-------KTPAKKTRPSSTVIKK 518
Query: 170 VAKSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPK 204
+ K K A +K K P K K+ K+ + K
Sbjct: 519 PSGGSSK-KPATSARKEVKLPGKGKSTMKKSFRVK 552
Score = 30.0 bits (66), Expect = 1.7
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 83 IKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGE 118
+K L+ V +G L Q G GASG+F+L K SGE
Sbjct: 301 LKNALQRAVERGQLEQITGKGASGTFQLKK---SGE 333
>gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo
sapiens]
Length = 351
Score = 48.5 bits (114), Expect = 5e-06
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 8/200 (4%)
Query: 26 KKAAGAGAAKRKATGP--PVSELITKAVAASKERNGLSLAALKKALAAGGYDVEKNNSRI 83
++ AG G + P P L+ + + +R + A + KA + G + K R
Sbjct: 49 QRPAGRGPCATLRSHPITPAPALLLLSHSLPAQRRSMQ-ATVAKAGSPGRGRLGKEPRRR 107
Query: 84 KLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAKPKAKKAGAAKAKKPAGATPKKAK 143
+ +S + G+ + G+ KP+ + AAK++ G P+ K
Sbjct: 108 ESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQK 167
Query: 144 KAAGAKKAVKKTPKKAKKPAAAGVKKVAK-SPKKAKAAAKPKKATKSPAKPKAVKPKAAK 202
A K +K ++ ++ AAAG KK+ K + K++ K A KP+ +
Sbjct: 168 AAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPR----RRRG 223
Query: 203 PKAAKPKAAKPKAAKAKKAA 222
KAAK + K + +KAA
Sbjct: 224 QKAAKSRGGGDKKLERQKAA 243
Score = 38.9 bits (89), Expect = 0.004
Identities = 43/150 (28%), Positives = 58/150 (38%), Gaps = 22/150 (14%)
Query: 21 KKKATKKAAGAGAAKRK--------ATGPPVSELITKAVAASKERNGLSLAAL------- 65
KK +KAAGAGA K + A +L A A S+ G AA
Sbjct: 161 KKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRR 220
Query: 66 ----KKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEA-K 120
K A + GG D K R K L + S+G +G N K+ G K
Sbjct: 221 RRGQKAAKSRGGGD--KKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEK 278
Query: 121 PKAKKAGAAKAKKPAGATPKKAKKAAGAKK 150
P+ A AK++ G P+KA+ G +
Sbjct: 279 PQKAAAAGAKSRGGRGEKPQKAEAGQGQNR 308
Score = 32.3 bits (72), Expect = 0.34
Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Query: 144 KAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAKPKKATKSPAKPKAVKPKAAKP 203
+ G KK ++ K AK G K P+ KAA K + P + A
Sbjct: 138 RGGGDKKPRRRGQKAAKSRGGGG-----KKPRGQKAAGAGAKKHRKPRRRGERAAAAGGK 192
Query: 204 KAAKPKAAKPKAAKAKKAAA 223
K K AAK + KK AA
Sbjct: 193 KLQKAAAAKSRGGGGKKTAA 212
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 48.1 bits (113), Expect = 6e-06
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Query: 117 GEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKK 176
G K A++AG K K + G K + P AK P AK P +
Sbjct: 445 GPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGS--AKPPSQ 502
Query: 177 AKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKA 221
+ KP PAKP +P + KP + +P +AKP A + A
Sbjct: 503 QPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPA 547
Score = 48.1 bits (113), Expect = 6e-06
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Query: 116 SGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPK 175
+G K A++ G K K + G K + P AK P+ K P
Sbjct: 454 AGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGS--TKPPP 511
Query: 176 KAKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAK 224
+ AKP KP + +P +AKP A +P AKP A ++ K ++
Sbjct: 512 QQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQ 560
Score = 44.3 bits (103), Expect = 9e-05
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Query: 111 NKKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAA-AGVKK 169
++K+ G AKP A+ +G K T K + G K + AK PA G +K
Sbjct: 321 HEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEK 380
Query: 170 VAKSPKKAKAAAKPKKATKSPAK-PKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKKK 226
+ KA A+P K+PA+ P KP + KP A +P KA K
Sbjct: 381 PSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTK 438
Score = 39.3 bits (90), Expect = 0.003
Identities = 36/134 (26%), Positives = 49/134 (36%), Gaps = 36/134 (26%)
Query: 116 SGEAKPKAKKAGAAKAKKPAG-------------------ATPK---------KAKKAAG 147
+G KP +++ G +P G TPK KA G
Sbjct: 376 TGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPG 435
Query: 148 AKKAVKKTPKKAKKPA-AAGVKKVA-------KSPKKAKAAAKPKKATKSPAKPKAVKPK 199
K + P K PA AG K + K P + AKP PAKP +P
Sbjct: 436 PTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPG 495
Query: 200 AAKPKAAKPKAAKP 213
+AKP + +P + KP
Sbjct: 496 SAKPPSQQPGSTKP 509
Score = 38.9 bits (89), Expect = 0.004
Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 9/106 (8%)
Query: 117 GEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPA--AAGVKKVAKSP 174
G AKP ++ G+AK + K + G K + P K P+ K A+ P
Sbjct: 485 GPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQP 544
Query: 175 KKAKAAA----KPKKATKS--PAKPKAVKPKAAKPKA-AKPKAAKP 213
AK +A KP T S P +P V P A +P + PK P
Sbjct: 545 SPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQGLPKTICP 590
Score = 38.5 bits (88), Expect = 0.005
Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 125 KAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAG--VKKVAKSPKKAKAAAK 182
K KP P K A K P AK PA K +A+ P K +
Sbjct: 295 KPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQ 354
Query: 183 PKKATKSPAKPKA-VKPKAAKPKAAKPKAAKP 213
P TK PA+P KP A + + KP + +P
Sbjct: 355 PPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQP 386
Score = 36.2 bits (82), Expect = 0.023
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 7/105 (6%)
Query: 116 SGEAKPKAKKAGAAKAK-KPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVA--- 171
SG KP A++ G K +P G T A+ AK ++T + G K +A
Sbjct: 336 SGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPP 395
Query: 172 ---KSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKP 213
K+P + AKP KP A +P P A P
Sbjct: 396 GVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTP 440
Score = 35.8 bits (81), Expect = 0.031
Identities = 38/138 (27%), Positives = 51/138 (36%), Gaps = 46/138 (33%)
Query: 117 GEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVA----- 171
G AKP A++ G+ +KP+ P KA V KTP + PA ++V
Sbjct: 367 GPAKPPAQQTGS---EKPSSEQP--GPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPL 421
Query: 172 ------KSPKKA------------------------KAAA------KPKKATKSPAKPKA 195
+SP KA K +A KP PAKP
Sbjct: 422 AQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPP 481
Query: 196 VKPKAAKPKAAKPKAAKP 213
+P AKP +P +AKP
Sbjct: 482 QQPGPAKPPPQQPGSAKP 499
Score = 35.4 bits (80), Expect = 0.040
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 115 ASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSP 174
++G+A P K+ K + A A K KA A VK+T + K P K + P
Sbjct: 982 STGQAPPAPAKSIPVKKETKAPAAEKLEPKAEQAP-TVKRTETEKKPPPIKDSKSLTAEP 1040
Query: 175 KKAKAAAKPKKATKSPAKPKAVKP 198
+K A P K KSP KP++ P
Sbjct: 1041 QK---AVLPTKLEKSP-KPESTCP 1060
Score = 34.7 bits (78), Expect = 0.068
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 4/105 (3%)
Query: 126 AGAAKAKKPAGATPKK---AKKAAGAKKAVKKTPKKAKKPAAAGVKKV-AKSPKKAKAAA 181
A + + +P +PKK K+ KK P K+P G AK P +A + +
Sbjct: 671 AVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLS 730
Query: 182 KPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKKK 226
KP + + K A K +PK KP ++A K
Sbjct: 731 KPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTK 775
Score = 31.6 bits (70), Expect = 0.58
Identities = 30/119 (25%), Positives = 43/119 (36%), Gaps = 18/119 (15%)
Query: 120 KPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKP------------AAAGV 167
KP K+ G + TPK K +K P KP A +
Sbjct: 217 KPIPKQQGPGRDPLQQDGTPKSISSQQPEK--IKSQPPGTGKPIQGPTQTPQTDHAKLPL 274
Query: 168 KKVAKSPKKAKA----AAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAA 222
++ A P+ +A K + SP+KP +P KP A +P K + AK A
Sbjct: 275 QRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPA 333
Score = 30.4 bits (67), Expect = 1.3
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 119 AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAA-GVKKVAKSPKKA 177
++P+ K+A + + + P +K + P K PA G +K P A
Sbjct: 279 SRPQTKQADIVRGESVKPSLPSPSKPPI-------QQPTPGKPPAQQPGHEK--SQPGPA 329
Query: 178 KAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKA 215
K A+P TK P A +P KP P KP A
Sbjct: 330 KPPAQPSGLTK----PLAQQPGTVKPPVQPPGTTKPPA 363
Score = 28.1 bits (61), Expect = 6.4
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 143 KKAAGAKKA-VKKTPK-KAKKPAAAGVKKVAKSPKKAKAAAKPKKATKSPAKPKAVKPKA 200
K+A G A V +P+ K K V+KS + + + K A KA +PK
Sbjct: 643 KRALGGDLAPVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKK 702
Query: 201 AKPKAAKPKAAKPKAAKAKK 220
P +P +AKAK+
Sbjct: 703 PPPLVKQPTLHGSPSAKAKQ 722
Score = 28.1 bits (61), Expect = 6.4
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 12/81 (14%)
Query: 146 AGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPKA 205
+G +K+ P ++ P + G P K+ A P +PAK VK + P A
Sbjct: 958 SGPGAPMKQAPAPSQPPTSQG-------PPKSTGQAPP-----APAKSIPVKKETKAPAA 1005
Query: 206 AKPKAAKPKAAKAKKAAAKKK 226
K + +A K+ +KK
Sbjct: 1006 EKLEPKAEQAPTVKRTETEKK 1026
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 48.1 bits (113), Expect = 6e-06
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Query: 117 GEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKK 176
G K A++AG K K + G K + P AK P AK P +
Sbjct: 445 GPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGS--AKPPSQ 502
Query: 177 AKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKA 221
+ KP PAKP +P + KP + +P +AKP A + A
Sbjct: 503 QPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPA 547
Score = 48.1 bits (113), Expect = 6e-06
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Query: 116 SGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPK 175
+G K A++ G K K + G K + P AK P+ K P
Sbjct: 454 AGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGS--TKPPP 511
Query: 176 KAKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAK 224
+ AKP KP + +P +AKP A +P AKP A ++ K ++
Sbjct: 512 QQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQ 560
Score = 44.3 bits (103), Expect = 9e-05
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Query: 111 NKKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAA-AGVKK 169
++K+ G AKP A+ +G K T K + G K + AK PA G +K
Sbjct: 321 HEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEK 380
Query: 170 VAKSPKKAKAAAKPKKATKSPAK-PKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKKK 226
+ KA A+P K+PA+ P KP + KP A +P KA K
Sbjct: 381 PSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTK 438
Score = 39.3 bits (90), Expect = 0.003
Identities = 36/134 (26%), Positives = 49/134 (36%), Gaps = 36/134 (26%)
Query: 116 SGEAKPKAKKAGAAKAKKPAG-------------------ATPK---------KAKKAAG 147
+G KP +++ G +P G TPK KA G
Sbjct: 376 TGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPG 435
Query: 148 AKKAVKKTPKKAKKPA-AAGVKKVA-------KSPKKAKAAAKPKKATKSPAKPKAVKPK 199
K + P K PA AG K + K P + AKP PAKP +P
Sbjct: 436 PTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPG 495
Query: 200 AAKPKAAKPKAAKP 213
+AKP + +P + KP
Sbjct: 496 SAKPPSQQPGSTKP 509
Score = 38.9 bits (89), Expect = 0.004
Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 9/106 (8%)
Query: 117 GEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPA--AAGVKKVAKSP 174
G AKP ++ G+AK + K + G K + P K P+ K A+ P
Sbjct: 485 GPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQP 544
Query: 175 KKAKAAA----KPKKATKS--PAKPKAVKPKAAKPKA-AKPKAAKP 213
AK +A KP T S P +P V P A +P + PK P
Sbjct: 545 SPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQGLPKTICP 590
Score = 38.5 bits (88), Expect = 0.005
Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 125 KAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAG--VKKVAKSPKKAKAAAK 182
K KP P K A K P AK PA K +A+ P K +
Sbjct: 295 KPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQ 354
Query: 183 PKKATKSPAKPKA-VKPKAAKPKAAKPKAAKP 213
P TK PA+P KP A + + KP + +P
Sbjct: 355 PPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQP 386
Score = 36.2 bits (82), Expect = 0.023
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 7/105 (6%)
Query: 116 SGEAKPKAKKAGAAKAK-KPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVA--- 171
SG KP A++ G K +P G T A+ AK ++T + G K +A
Sbjct: 336 SGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPP 395
Query: 172 ---KSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKP 213
K+P + AKP KP A +P P A P
Sbjct: 396 GVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTP 440
Score = 35.8 bits (81), Expect = 0.031
Identities = 38/138 (27%), Positives = 51/138 (36%), Gaps = 46/138 (33%)
Query: 117 GEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVA----- 171
G AKP A++ G+ +KP+ P KA V KTP + PA ++V
Sbjct: 367 GPAKPPAQQTGS---EKPSSEQP--GPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPL 421
Query: 172 ------KSPKKA------------------------KAAA------KPKKATKSPAKPKA 195
+SP KA K +A KP PAKP
Sbjct: 422 AQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPP 481
Query: 196 VKPKAAKPKAAKPKAAKP 213
+P AKP +P +AKP
Sbjct: 482 QQPGPAKPPPQQPGSAKP 499
Score = 35.4 bits (80), Expect = 0.040
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 115 ASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSP 174
++G+A P K+ K + A A K KA A VK+T + K P K + P
Sbjct: 982 STGQAPPAPAKSIPVKKETKAPAAEKLEPKAEQAP-TVKRTETEKKPPPIKDSKSLTAEP 1040
Query: 175 KKAKAAAKPKKATKSPAKPKAVKP 198
+K A P K KSP KP++ P
Sbjct: 1041 QK---AVLPTKLEKSP-KPESTCP 1060
Score = 34.7 bits (78), Expect = 0.068
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 4/105 (3%)
Query: 126 AGAAKAKKPAGATPKK---AKKAAGAKKAVKKTPKKAKKPAAAGVKKV-AKSPKKAKAAA 181
A + + +P +PKK K+ KK P K+P G AK P +A + +
Sbjct: 671 AVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLS 730
Query: 182 KPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKKK 226
KP + + K A K +PK KP ++A K
Sbjct: 731 KPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTK 775
Score = 31.6 bits (70), Expect = 0.58
Identities = 30/119 (25%), Positives = 43/119 (36%), Gaps = 18/119 (15%)
Query: 120 KPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKP------------AAAGV 167
KP K+ G + TPK K +K P KP A +
Sbjct: 217 KPIPKQQGPGRDPLQQDGTPKSISSQQPEK--IKSQPPGTGKPIQGPTQTPQTDHAKLPL 274
Query: 168 KKVAKSPKKAKA----AAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAA 222
++ A P+ +A K + SP+KP +P KP A +P K + AK A
Sbjct: 275 QRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPA 333
Score = 30.4 bits (67), Expect = 1.3
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 119 AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAA-GVKKVAKSPKKA 177
++P+ K+A + + + P +K + P K PA G +K P A
Sbjct: 279 SRPQTKQADIVRGESVKPSLPSPSKPPI-------QQPTPGKPPAQQPGHEK--SQPGPA 329
Query: 178 KAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKA 215
K A+P TK P A +P KP P KP A
Sbjct: 330 KPPAQPSGLTK----PLAQQPGTVKPPVQPPGTTKPPA 363
Score = 28.1 bits (61), Expect = 6.4
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 143 KKAAGAKKA-VKKTPK-KAKKPAAAGVKKVAKSPKKAKAAAKPKKATKSPAKPKAVKPKA 200
K+A G A V +P+ K K V+KS + + + K A KA +PK
Sbjct: 643 KRALGGDLAPVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKK 702
Query: 201 AKPKAAKPKAAKPKAAKAKK 220
P +P +AKAK+
Sbjct: 703 PPPLVKQPTLHGSPSAKAKQ 722
Score = 28.1 bits (61), Expect = 6.4
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 12/81 (14%)
Query: 146 AGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPKA 205
+G +K+ P ++ P + G P K+ A P +PAK VK + P A
Sbjct: 958 SGPGAPMKQAPAPSQPPTSQG-------PPKSTGQAPP-----APAKSIPVKKETKAPAA 1005
Query: 206 AKPKAAKPKAAKAKKAAAKKK 226
K + +A K+ +KK
Sbjct: 1006 EKLEPKAEQAPTVKRTETEKK 1026
>gi|29244924 chromodomain helicase DNA binding protein 6 [Homo
sapiens]
Length = 2715
Score = 48.1 bits (113), Expect = 6e-06
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 14/130 (10%)
Query: 97 VQTKGTGASGSFKLNKKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTP 156
++ G G +G K KK G+ + GAAK K PK+ ++ K+ P
Sbjct: 82 MEDSGGGGTGVKKKRKKKEPGDQE------GAAKGSKDREPKPKRKREPKEPKE-----P 130
Query: 157 KKAKKPAAAGVKKVAKSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAA 216
+KAK+P A K K PK+ A K +K ++ +A + ++ AA+ K+ K
Sbjct: 131 RKAKEPKKA---KEHKEPKQKDGAKKARKPREASGTKEAKEKRSCTDSAARTKSRKASKE 187
Query: 217 KAKKAAAKKK 226
+ KKK
Sbjct: 188 QGPTPVEKKK 197
>gi|153791662 coiled-coil domain containing 71 [Homo sapiens]
Length = 467
Score = 47.8 bits (112), Expect = 8e-06
Identities = 51/152 (33%), Positives = 67/152 (44%), Gaps = 13/152 (8%)
Query: 88 KSLVSKGTLVQT-KGTGAS---GSFKLNK-KAASGEAKPKAKKAGAAKAKKPAGA-TPKK 141
+ SKG T KG GA GS +K A+G + K G+A K A A +
Sbjct: 229 RKTTSKGPKCLTRKGPGAGPRRGSGHQSKTNRATGSPSVRRMKGGSALGTKTAQAKVART 288
Query: 142 AKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAKPKKA------TKSPAKPKA 195
KAA A+ V +T KA K A K+ KAKAA KA K+ AK KA
Sbjct: 289 LAKAARAQAKVARTQAKAAKARAKAKAAQVKAKAKAKAAQVKAKAKVMAAWAKAKAKAKA 348
Query: 196 VKPKAAKPKAAKPKAAKPK-AAKAKKAAAKKK 226
V+ KA + +PK +AKA+ +K
Sbjct: 349 VRAKAKVARTQPRGRGRPKGSAKARTTRKGQK 380
Score = 45.4 bits (106), Expect = 4e-05
Identities = 57/206 (27%), Positives = 77/206 (37%), Gaps = 13/206 (6%)
Query: 18 SPAK-KKATKKAAGAGAAK--RKATGPPVSELITKAVAASKERNGLSLAALKKALAAGGY 74
SP K +K++ K G K RK T L K A R S K A G
Sbjct: 208 SPLKLRKSSGKGPGNPRPKAPRKTTSKGPKCLTRKGPGAGPRRG--SGHQSKTNRATGSP 265
Query: 75 DVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSF-KLNKKAASGEAKPKAKKAGAAKAKK 133
V + LG K+ +K K A + KAA AK KA + AKAK
Sbjct: 266 SVRRMKGGSALGTKTAQAKVARTLAKAARAQAKVARTQAKAAKARAKAKAAQV-KAKAKA 324
Query: 134 PAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAKPKKATKSPAKP 193
A KAK A KA KAK A KVA++ + + K ++ K
Sbjct: 325 KAAQVKAKAKVMAAWAKA------KAKAKAVRAKAKVARTQPRGRGRPKGSAKARTTRKG 378
Query: 194 KAVKPKAAKPKAAKPKAAKPKAAKAK 219
+ +P+ K + + AK K +
Sbjct: 379 QKNRPETVGQKRKRAEEAKDLPPKKR 404
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.298 0.113 0.291
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,112,175
Number of Sequences: 37866
Number of extensions: 373058
Number of successful extensions: 7504
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 323
Number of HSP's successfully gapped in prelim test: 488
Number of HSP's that attempted gapping in prelim test: 3278
Number of HSP's gapped (non-prelim): 2745
length of query: 226
length of database: 18,247,518
effective HSP length: 99
effective length of query: 127
effective length of database: 14,498,784
effective search space: 1841345568
effective search space used: 1841345568
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.