Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RPL14 Sequence: fasta or formatted (215aa) NCBI GI: 78000183
Description:

ribosomal protein L14

Referenced in:

Ribosomes

Other entries for this name:
alt mRNA [215aa] ribosomal protein L14
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            20.9         45          10
 C cysteine            0.9          2           1
 D aspartate           3.3          7           1
 E glutamate           1.9          4           1
 F phenylalanine       3.7          8           1
 G glycine             4.2          9           1
 H histidine           1.4          3           1
 I isoleucine          3.7          8           2
 K lysine             17.2         37           2
 L leucine             3.3          7           2
 M methionine          2.8          6           1
 N asparagine          1.9          4           1
 P proline             6.5         14           1
 Q glutamine           6.5         14           1
 R arginine            6.0         13           2
 S serine              2.3          5           1
 T threonine           4.2          9           1
 V valine              7.0         15           1
 W tryptophan          1.4          3           1
 Y tyrosine            0.9          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein L14 
RPL14                 1.000   ribosomal protein L14 
HIST1H1B              0.065   histone cluster 1, H1b 
FAM71E2               0.060   hypothetical protein LOC284418 
HIST1H1E              0.060   histone cluster 1, H1e 
BASP1                 0.048   brain abundant, membrane attached signal protein 1 [...
NACA                  0.043   nascent polypeptide-associated complex alpha subuni...
HIST1H1C              0.040   histone cluster 1, H1c 
LOC100130174          0.038   PREDICTED: hypothetical protein 
AMOT                  0.038   angiomotin isoform 2 
AMOT                  0.038   angiomotin isoform 1 
RPL4                  0.038   ribosomal protein L4 
TAF4                  0.038   TBP-associated factor 4 
NEFH                  0.038   neurofilament, heavy polypeptide 200kDa 
HIST1H1D              0.038   histone cluster 1, H1d 
FAM48B1               0.035   hypothetical protein LOC100130302 
NCL                   0.035   nucleolin 
C1orf113              0.035   SH3 domain-containing protein C1orf113 isoform 1 [H...
C1orf113              0.035   SH3 domain-containing protein C1orf113 isoform 2 [H...
TRDN                  0.035   triadin 
HOXA13                0.033   homeobox A13 
LOC100130174          0.030   PREDICTED: hypothetical protein 
LOC100130174          0.030   PREDICTED: hypothetical protein 
LOC100287688          0.030   PREDICTED: hypothetical protein XP_002342270 
TPRX1                 0.030   tetra-peptide repeat homeobox 
PNMAL2                0.030   PNMA-like 2 
BSN                   0.028   bassoon protein 
H1F0                  0.028   H1 histone family, member 0 
NOLC1                 0.025   nucleolar and coiled-body phosphoprotein 1 
TCOF1                 0.025   Treacher Collins-Franceschetti syndrome 1 isoform f...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press