MDS1 31009

Name: MDS1	Sequence: fasta or formatted (169aa)		NCBI GI: 4826828
Description: myelodysplasia syndrome protein 1		Referenced in: Kruppel-related Zinc Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 12 1 C cysteine 1.8 3 1 D aspartate 4.1 7 2 E glutamate 8.3 14 2 F phenylalanine 3.0 5 1 G glycine 8.3 14 1 H histidine 1.2 2 1 I isoleucine 5.3 9 1 K lysine 5.3 9 1 L leucine 6.5 11 1 M methionine 2.4 4 1 N asparagine 3.6 6 2 P proline 10.1 17 1 Q glutamine 2.4 4 1 R arginine 5.9 10 2 S serine 10.1 17 2 T threonine 3.0 5 1 V valine 5.3 9 1 W tryptophan 1.8 3 1 Y tyrosine 4.7 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 myelodysplasia syndrome protein 1 PRDM16 0.317 PR domain containing 16 isoform 2 PRDM16 0.317 PR domain containing 16 isoform 1 PRDM2 0.067 retinoblastoma protein-binding zinc finger protein ... PRDM2 0.067 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.067 retinoblastoma protein-binding zinc finger protein i... PRDM5 0.052 PR domain containing 5 PRDM12 0.049 PR domain containing 12 PRDM4 0.034 PR domain containing 4 BCORL1 0.030 BCL6 co-repressor-like 1 ZBTB3 0.027 zinc finger and BTB domain containing 3 LOC100292304 0.024 PREDICTED: hypothetical protein LOC100286995 0.024 PREDICTED: hypothetical protein LOC100286995 0.024 PREDICTED: hypothetical protein XP_002344221 PRDM7 0.024 PR domain containing 7 isoform 1 PRDM7 0.024 PR domain containing 7 isoform 2 PRDM9 0.024 PR domain containing 9 LOC100132247 0.021 hypothetical protein LOC100132247 LOC728888 0.021 PREDICTED: similar to acyl-CoA synthetase medium-ch... NPIPL3 0.018 nuclear pore complex interacting protein-like 3 [Ho... MLL2 0.015 myeloid/lymphoid or mixed-lineage leukemia 2 TRIOBP 0.015 TRIO and F-actin binding protein isoform 6 ITGB1BP2 0.015 integrin beta 1 binding protein 2 MAFB 0.015 transcription factor MAFB PRDM6 0.015 PR domain containing 6 MICALCL 0.015 MICAL C-terminal like NPIP 0.015 nuclear pore complex interacting protein TXNDC2 0.012 thioredoxin domain-containing 2 isoform 1 TXNDC2 0.012 thioredoxin domain-containing 2 isoform 2 TXNDC2 0.012 thioredoxin domain-containing 2 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.