Guide to the Human Genome
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Name: ITGB1BP2 Sequence: fasta or formatted (347aa) NCBI GI: 6912438
Description:

integrin beta 1 binding protein 2

Referenced in:

Integrins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         24           1
 C cysteine            4.3         15           2
 D aspartate           6.1         21           3
 E glutamate           8.6         30           7
 F phenylalanine       3.2         11           1
 G glycine             7.2         25           1
 H histidine           3.7         13           2
 I isoleucine          2.9         10           1
 K lysine              4.9         17           2
 L leucine             9.2         32           2
 M methionine          2.3          8           1
 N asparagine          2.9         10           1
 P proline             7.8         27           1
 Q glutamine           5.5         19           1
 R arginine            4.0         14           2
 S serine              7.8         27           3
 T threonine           3.7         13           1
 V valine              5.8         20           3
 W tryptophan          2.3          8           1
 Y tyrosine            0.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   integrin beta 1 binding protein 2 
CHORDC1               0.391   cysteine and histidine-rich domain-containing prote...
CHORDC1               0.329   cysteine and histidine-rich domain-containing prote...
SUGT1                 0.023   suppressor of G2 allele of SKP1 isoform a 
SUGT1                 0.023   suppressor of G2 allele of SKP1 isoform b 
ZNF526                0.016   zinc finger protein 526 
MED13L                0.014   mediator complex subunit 13-like 
CYB5R4                0.013   cytochrome b5 reductase 4 
MEGF11                0.011   multiple EGF-like-domains 11 
RBM28                 0.011   RNA binding motif protein 28 
APP                   0.011   amyloid beta A4 protein isoform c precursor 
APP                   0.011   amyloid beta A4 protein isoform b precursor 
APP                   0.011   amyloid beta A4 protein isoform a precursor 
APP                   0.011   amyloid beta A4 protein isoform e precursor 
APP                   0.011   amyloid beta A4 protein isoform f precursor 
EHMT2                 0.011   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.011   euchromatic histone-lysine N-methyltransferase 2 is...
USP19                 0.011   ubiquitin thioesterase 19 
FBXO46                0.011   F-box protein 46 
NCL                   0.010   nucleolin 
KCTD1                 0.010   potassium channel tetramerisation domain containing...
NAP1L5                0.010   nucleosome assembly protein 1-like 5 
N4BP1                 0.010   Nedd4 binding protein 1 
TNRC18                0.010   trinucleotide repeat containing 18 
MYST4                 0.010   MYST histone acetyltransferase (monocytic leukemia)...
DAXX                  0.008   death-domain associated protein isoform a 
DAXX                  0.008   death-domain associated protein isoform a 
DAXX                  0.008   death-domain associated protein isoform b 
APC2                  0.008   adenomatosis polyposis coli 2 
ATAD2                 0.008   ATPase family, AAA domain containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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