Guide to the Human Genome
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Name: ZBTB3 Sequence: fasta or formatted (574aa) NCBI GI: 13376146
Description:

zinc finger and BTB domain containing 3

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         54           3
 C cysteine            1.7         10           1
 D aspartate           4.7         27           1
 E glutamate           7.3         42           3
 F phenylalanine       3.7         21           2
 G glycine             7.8         45           3
 H histidine           2.8         16           1
 I isoleucine          1.6          9           1
 K lysine              3.5         20           2
 L leucine             9.1         52           3
 M methionine          1.2          7           1
 N asparagine          1.0          6           1
 P proline            11.1         64           2
 Q glutamine           4.0         23           2
 R arginine            5.4         31           2
 S serine             10.1         58           3
 T threonine           5.6         32           2
 V valine              6.1         35           2
 W tryptophan          1.0          6           1
 Y tyrosine            2.8         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger and BTB domain containing 3 
ZNF238                0.212   zinc finger protein 238 isoform 1 
ZNF238                0.212   zinc finger protein 238 isoform 2 
ZBTB42                0.169   zinc finger and BTB domain containing 42 
ZBTB7A                0.081   zinc finger and BTB domain containing 7A 
ZBTB5                 0.080   zinc finger and BTB domain containing 5 
ZBTB17                0.076   zinc finger and BTB domain containing 17 
HIC1                  0.076   hypermethylated in cancer 1 isoform 2 
HIC1                  0.076   hypermethylated in cancer 1 isoform 1 
HIC2                  0.071   hypermethylated in cancer 2 
ZBTB46                0.069   zinc finger and BTB domain containing 46 
BCL6B                 0.067   B-cell CLL/lymphoma 6, member B (zinc finger protein...
ZBTB44                0.065   zinc finger and BTB domain containing 44 
ZNF509                0.062   zinc finger protein 509 
ZBTB8A                0.060   zinc finger and BTB domain containing 8A 
ZBTB8B                0.055   zinc finger and BTB domain containing 8B 
ZBTB9                 0.055   zinc finger and BTB domain containing 9 
BCL6                  0.054   B-cell lymphoma 6 protein isoform 2 
MYNN                  0.054   myoneurin 
ZNF131                0.053   zinc finger protein 131 
BCL6                  0.049   B-cell lymphoma 6 protein isoform 1 
BCL6                  0.049   B-cell lymphoma 6 protein isoform 1 
ZBTB22                0.049   zinc finger and BTB domain containing 22 
ZBTB22                0.049   zinc finger and BTB domain containing 22 
ZBTB40                0.049   zinc finger and BTB domain containing 40 
ZBTB40                0.049   zinc finger and BTB domain containing 40 
ZBTB1                 0.048   zinc finger and BTB domain containing 1 isoform 1 [...
ZBTB1                 0.048   zinc finger and BTB domain containing 1 isoform 2 [...
KLHL34                0.047   kelch-like 34 
ZBTB10                0.045   zinc finger and BTB domain containing 10 isoform b ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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