Guide to the Human Genome
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Name: MICALCL Sequence: fasta or formatted (695aa) NCBI GI: 118918413
Description:

MICAL C-terminal like

Referenced in:

LIM Domain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         47           2
 C cysteine            0.7          5           1
 D aspartate           4.5         31           1
 E glutamate          10.1         70           3
 F phenylalanine       2.4         17           1
 G glycine             5.0         35           2
 H histidine           1.6         11           2
 I isoleucine          2.2         15           1
 K lysine              8.1         56           2
 L leucine            10.8         75           3
 M methionine          1.4         10           1
 N asparagine          2.3         16           1
 P proline            10.6         74          14
 Q glutamine           6.5         45           1
 R arginine            7.2         50           3
 S serine             11.7         81           4
 T threonine           3.3         23           1
 V valine              3.5         24           1
 W tryptophan          0.9          6           1
 Y tyrosine            0.6          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MICAL C-terminal like 
MICAL3                0.133   microtubule associated monoxygenase, calponin and L...
MICAL1                0.069   microtubule associated monoxygenase, calponin and L...
MICAL1                0.069   microtubule associated monoxygenase, calponin and L...
MICALL2               0.060   MICAL-like 2 isoform 1 
MICALL1               0.054   molecule interacting with Rab13 
EHBP1                 0.049   EH domain binding protein 1 isoform 3 
EHBP1                 0.049   EH domain binding protein 1 isoform 3 
EHBP1                 0.049   EH domain binding protein 1 isoform 2 
EHBP1                 0.049   EH domain binding protein 1 isoform 1 
EHBP1L1               0.043   tangerin 
INCENP                0.031   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.030   inner centromere protein antigens 135/155kDa isofor...
GOLGA4                0.029   golgi autoantigen, golgin subfamily a, 4 
TCHH                  0.027   trichohyalin 
SRRM1                 0.026   serine/arginine repetitive matrix 1 
MAP7D1                0.026   MAP7 domain containing 1 
BZRAP1                0.024   peripheral benzodiazepine receptor-associated prote...
LOC283685             0.024   PREDICTED: golgi autoantigen, golgin subfamily a-li...
MYPOP                 0.024   Myb protein P42POP 
C16orf45              0.024   hypothetical protein LOC89927 isoform 1 
MLLT4                 0.024   myeloid/lymphoid or mixed-lineage leukemia (trithora...
PCLO                  0.024   piccolo isoform 2 
PCLO                  0.024   piccolo isoform 1 
BZRAP1                0.024   peripheral benzodiazepine receptor-associated prote...
JMY                   0.023   junction-mediating and regulatory protein 
LOC283685             0.023   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LMOD2                 0.023   leiomodin 2 (cardiac) 
SWAP70                0.022   SWAP-70 protein 
PCNT                  0.022   pericentrin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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