Guide to the Human Genome
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Name: LOC100286995 Sequence: fasta or formatted (503aa) NCBI GI: 239751954
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {503aa} PREDICTED: hypothetical protein XP_002344221
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         44           2
 C cysteine            2.0         10           1
 D aspartate           3.4         17           1
 E glutamate           4.6         23           2
 F phenylalanine       3.4         17           3
 G glycine            11.5         58           3
 H histidine           3.4         17           2
 I isoleucine          2.6         13           1
 K lysine              3.0         15           1
 L leucine            13.3         67           3
 M methionine          1.0          5           1
 N asparagine          1.4          7           1
 P proline             9.7         49           1
 Q glutamine           5.4         27           2
 R arginine            6.6         33           2
 S serine              8.0         40           2
 T threonine           4.2         21           2
 V valine              5.4         27           1
 W tryptophan          1.8          9           1
 Y tyrosine            0.8          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100292304          1.000   PREDICTED: hypothetical protein 
LOC100286995          0.999   PREDICTED: hypothetical protein XP_002344221 
KDM6B                 0.018   lysine (K)-specific demethylase 6B 
FGFRL1                0.013   fibroblast growth factor receptor-like 1 precursor [...
FGFRL1                0.013   fibroblast growth factor receptor-like 1 precursor [...
FGFRL1                0.013   fibroblast growth factor receptor-like 1 precursor [...
FLJ37078              0.013   hypothetical protein LOC222183 
HSF4                  0.012   heat shock transcription factor 4 isoform b 
DDX51                 0.012   DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 
PHOX2A                0.010   paired-like homeobox 2a 
SAMD11                0.010   sterile alpha motif domain containing 11 
GOLSYN                0.009   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.009   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.009   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.009   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.009   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.009   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.009   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.009   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.009   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.009   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.009   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.009   Golgi-localized syntaphilin-related protein isoform...
TTBK1                 0.009   tau tubulin kinase 1 
ZFC3H1                0.009   proline/serine-rich coiled-coil 2 
LOC100128905          0.008   PREDICTED: hypothetical protein 
LOC100128905          0.008   PREDICTED: hypothetical protein 
MDS1                  0.008   myelodysplasia syndrome protein 1 
IRS2                  0.008   insulin receptor substrate 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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