NKX2-5 30614

Name: NKX2-5	Sequence: fasta or formatted (324aa)		NCBI GI: 4758090
Description: NK2 transcription factor related, locus 5		Referenced in: Homeobox and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 16.0 52 3 C cysteine 2.2 7 1 D aspartate 3.1 10 1 E glutamate 5.2 17 1 F phenylalanine 3.1 10 1 G glycine 6.2 20 2 H histidine 0.3 1 1 I isoleucine 1.5 5 1 K lysine 4.6 15 2 L leucine 8.6 28 1 M methionine 0.6 2 1 N asparagine 3.4 11 3 P proline 12.7 41 7 Q glutamine 5.2 17 3 R arginine 7.7 25 4 S serine 6.5 21 2 T threonine 3.1 10 1 V valine 4.6 15 1 W tryptophan 0.6 2 1 Y tyrosine 4.6 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 NK2 transcription factor related, locus 5 NKX2-3 0.341 NK2 transcription factor related, locus 3 NKX2-6 0.278 NK2 transcription factor related, locus 6 NKX2-4 0.187 NK2 homeobox 4 NKX2-8 0.178 NK2 homeobox 8 NKX2-2 0.171 NK2 transcription factor related, locus 2 NKX2-1 0.165 thyroid transcription factor 1 isoform 1 NKX2-1 0.165 thyroid transcription factor 1 isoform 2 NKX3-2 0.129 NK3 homeobox 2 HMX1 0.112 homeo box (H6 family) 1 MSX1 0.097 msh homeobox 1 NKX3-1 0.090 NK3 homeobox 1 LBX2 0.090 ladybird homeobox 2 HMX3 0.090 H6 family homeobox 3 LBX1 0.090 ladybird homeobox 1 MSX2 0.090 msh homeobox 2 HMX2 0.086 H6 family homeobox 2 DLX4 0.082 distal-less homeobox 4 isoform a TLX2 0.082 T-cell leukemia homeobox 2 DLX3 0.080 distal-less homeobox 3 BSX 0.080 brain specific homeobox RAX 0.080 retina and anterior neural fold homeobox PDX1 0.079 pancreatic and duodenal homeobox 1 DLX1 0.079 distal-less homeobox 1 isoform 1 NKX1-1 0.079 PREDICTED: NK1 homeobox 1 TLX3 0.079 T-cell leukemia homeobox 3 HOXA3 0.077 homeobox A3 isoform a HOXA3 0.077 homeobox A3 isoform a NKX1-1 0.077 PREDICTED: HPX-153 homeobox DLX2 0.077 distal-less homeobox 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.