NKX3-1 11648

Name: NKX3-1	Sequence: fasta or formatted (234aa)		NCBI GI: 19923352
Description: NK3 homeobox 1		Referenced in: Homeobox and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 21 2 C cysteine 0.4 1 1 D aspartate 2.6 6 1 E glutamate 9.8 23 2 F phenylalanine 2.6 6 1 G glycine 5.6 13 2 H histidine 2.1 5 1 I isoleucine 1.7 4 1 K lysine 6.0 14 1 L leucine 9.8 23 2 M methionine 0.4 1 1 N asparagine 2.1 5 1 P proline 10.3 24 2 Q glutamine 6.4 15 1 R arginine 8.5 20 2 S serine 9.8 23 2 T threonine 5.1 12 1 V valine 2.6 6 1 W tryptophan 1.3 3 1 Y tyrosine 3.8 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 NK3 homeobox 1 NKX3-2 0.217 NK3 homeobox 2 NKX2-3 0.151 NK2 transcription factor related, locus 3 NKX2-8 0.149 NK2 homeobox 8 NKX2-6 0.140 NK2 transcription factor related, locus 6 BARHL1 0.137 BarH-like homeobox 1 NKX2-1 0.135 thyroid transcription factor 1 isoform 1 NKX2-1 0.135 thyroid transcription factor 1 isoform 2 NKX2-4 0.135 NK2 homeobox 4 NKX2-5 0.126 NK2 transcription factor related, locus 5 BARHL2 0.126 BarH-like homeobox 2 HHEX 0.122 hematopoietically expressed homeobox NKX1-2 0.122 NK1 homeobox 2 HMX2 0.120 H6 family homeobox 2 HMX1 0.120 homeo box (H6 family) 1 NKX1-2 0.118 PREDICTED: NK1 homeobox 2 NKX1-2 0.118 PREDICTED: NK1 homeobox 2 NKX1-2 0.118 PREDICTED: NK1 homeobox 2 NKX2-2 0.118 NK2 transcription factor related, locus 2 HOXD3 0.115 homeobox D3 TLX3 0.115 T-cell leukemia homeobox 3 TLX2 0.115 T-cell leukemia homeobox 2 MNX1 0.115 homeo box HB9 GBX2 0.115 gastrulation brain homeo box 2 NKX1-1 0.113 PREDICTED: NK1 homeobox 1 HOXA3 0.111 homeobox A3 isoform a HOXA3 0.111 homeobox A3 isoform a HMX3 0.111 H6 family homeobox 3 MSX2 0.111 msh homeobox 2 TLX1 0.111 T-cell leukemia homeobox 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.