NKX2-6 12563

Name: NKX2-6	Sequence: fasta or formatted (219aa)		NCBI GI: 210147470
Description: NK2 transcription factor related, locus 6		Referenced in: Homeobox and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.9 26 2 C cysteine 1.8 4 1 D aspartate 1.8 4 1 E glutamate 3.7 8 1 F phenylalanine 2.3 5 1 G glycine 13.2 29 3 H histidine 2.3 5 1 I isoleucine 0.5 1 1 K lysine 3.7 8 1 L leucine 7.8 17 1 M methionine 0.9 2 1 N asparagine 1.8 4 1 P proline 10.5 23 1 Q glutamine 6.8 15 2 R arginine 9.6 21 2 S serine 7.3 16 1 T threonine 3.7 8 1 V valine 5.5 12 1 W tryptophan 0.9 2 1 Y tyrosine 4.1 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 NK2 transcription factor related, locus 6 NKX2-5 0.411 NK2 transcription factor related, locus 5 NKX2-3 0.399 NK2 transcription factor related, locus 3 NKX2-2 0.265 NK2 transcription factor related, locus 2 NKX2-4 0.260 NK2 homeobox 4 NKX2-1 0.253 thyroid transcription factor 1 isoform 1 NKX2-1 0.253 thyroid transcription factor 1 isoform 2 NKX2-8 0.225 NK2 homeobox 8 NKX3-2 0.190 NK3 homeobox 2 HMX3 0.153 H6 family homeobox 3 HMX1 0.151 homeo box (H6 family) 1 HMX2 0.148 H6 family homeobox 2 NKX3-1 0.146 NK3 homeobox 1 NKX1-1 0.144 PREDICTED: NK1 homeobox 1 NKX1-1 0.144 PREDICTED: NK1 homeobox 1 MSX1 0.142 msh homeobox 1 MSX2 0.142 msh homeobox 2 NKX1-1 0.139 PREDICTED: HPX-153 homeobox DLX2 0.137 distal-less homeobox 2 HOXA3 0.132 homeobox A3 isoform b HOXA3 0.132 homeobox A3 isoform a HOXA3 0.132 homeobox A3 isoform a NKX1-2 0.125 NK1 homeobox 2 DLX3 0.125 distal-less homeobox 3 DLX1 0.125 distal-less homeobox 1 isoform 1 NKX1-2 0.125 PREDICTED: NK1 homeobox 2 NKX1-2 0.125 PREDICTED: NK1 homeobox 2 NKX1-2 0.125 PREDICTED: NK1 homeobox 2 BSX 0.121 brain specific homeobox TLX2 0.118 T-cell leukemia homeobox 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.