PDX1 29957

Name: PDX1	Sequence: fasta or formatted (283aa)		NCBI GI: 4557673
Description: pancreatic and duodenal homeobox 1		Referenced in: Homeobox and Related Proteins Pancreas and Insulin
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.4 35 2 C cysteine 1.1 3 1 D aspartate 2.1 6 2 E glutamate 8.8 25 2 F phenylalanine 2.8 8 1 G glycine 8.5 24 4 H histidine 2.8 8 3 I isoleucine 1.4 4 1 K lysine 4.6 13 2 L leucine 8.1 23 2 M methionine 1.8 5 1 N asparagine 2.1 6 1 P proline 17.0 48 6 Q glutamine 4.6 13 1 R arginine 6.4 18 2 S serine 3.9 11 2 T threonine 2.8 8 1 V valine 4.2 12 1 W tryptophan 1.8 5 1 Y tyrosine 2.8 8 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 pancreatic and duodenal homeobox 1 HOXA3 0.179 homeobox A3 isoform a HOXA3 0.179 homeobox A3 isoform a HOXB4 0.172 homeobox B4 HOXB2 0.154 homeobox B2 HOXD3 0.151 homeobox D3 HOXA4 0.151 homeobox A4 HOXD4 0.144 homeobox D4 HOXA3 0.144 homeobox A3 isoform b HOXC4 0.140 homeobox C4 HOXC4 0.140 homeobox C4 HOXD8 0.137 homeobox D8 HOXB3 0.137 homeobox B3 GSX1 0.133 GS homeobox 1 MNX1 0.130 homeo box HB9 HOXA5 0.127 homeobox A5 CDX1 0.125 caudal type homeobox 1 HOXA2 0.125 homeobox A2 HOXC6 0.125 homeobox C6 isoform 2 HOXC6 0.125 homeobox C6 isoform 1 HOXA7 0.123 homeobox A7 HOXC5 0.123 homeobox C5 HOXB5 0.121 homeobox B5 HOXB7 0.120 homeobox B7 HOXB8 0.120 homeobox B8 HOXA6 0.114 homeobox A6 HOXC8 0.114 homeobox C8 HMX1 0.113 homeo box (H6 family) 1 GSX2 0.111 GS homeobox 2 TLX1 0.111 T-cell leukemia homeobox 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.