Guide to the Human Genome
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Name: DLX4 Sequence: fasta or formatted (240aa) NCBI GI: 20143962
Description:

distal-less homeobox 4 isoform a

Referenced in:

Homeobox and Related Proteins

Other entries for this name:
alt prot [168aa] distal-less homeobox 4 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         22           3
 C cysteine            1.7          4           1
 D aspartate           2.9          7           1
 E glutamate           3.8          9           1
 F phenylalanine       2.5          6           1
 G glycine             5.8         14           2
 H histidine           2.5          6           2
 I isoleucine          0.8          2           1
 K lysine              5.0         12           2
 L leucine            12.1         29           2
 M methionine          1.2          3           2
 N asparagine          2.5          6           1
 P proline            13.3         32           2
 Q glutamine           7.9         19           2
 R arginine            4.6         11           2
 S serine             11.2         27           2
 T threonine           4.6         11           2
 V valine              2.5          6           1
 W tryptophan          1.2          3           1
 Y tyrosine            4.6         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   distal-less homeobox 4 isoform a 
DLX4                  0.591   distal-less homeobox 4 isoform b 
DLX6                  0.287   distal-less homeobox 6 
DLX1                  0.276   distal-less homeobox 1 isoform 1 
DLX3                  0.209   distal-less homeobox 3 
DLX2                  0.205   distal-less homeobox 2 
DLX5                  0.194   distal-less homeobox 5 
MSX1                  0.135   msh homeobox 1 
BARX2                 0.131   BarH-like homeobox 2 
CDX1                  0.116   caudal type homeobox 1 
BARX1                 0.114   BarH-like homeobox 1 
MSX2                  0.112   msh homeobox 2 
NKX2-5                0.110   NK2 transcription factor related, locus 5 
NKX2-3                0.110   NK2 transcription factor related, locus 3 
BSX                   0.108   brain specific homeobox 
NKX2-6                0.105   NK2 transcription factor related, locus 6 
NKX3-1                0.103   NK3 homeobox 1 
NKX1-2                0.103   NK1 homeobox 2 
NKX1-2                0.103   PREDICTED: NK1 homeobox 2 
NKX1-2                0.103   PREDICTED: NK1 homeobox 2 
NKX1-1                0.103   PREDICTED: NK1 homeobox 1 
NKX1-2                0.103   PREDICTED: NK1 homeobox 2 
NKX2-8                0.103   NK2 homeobox 8 
NKX3-2                0.103   NK3 homeobox 2 
HOXA3                 0.101   homeobox A3 isoform a 
HOXA3                 0.101   homeobox A3 isoform a 
MNX1                  0.099   homeo box HB9 
EN2                   0.097   engrailed homeobox 2 
HMX2                  0.095   H6 family homeobox 2 
BARHL2                0.095   BarH-like homeobox 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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