Guide to the Human Genome
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Name: DLX3 Sequence: fasta or formatted (287aa) NCBI GI: 4885185
Description:

distal-less homeobox 3

Referenced in:

Homeobox and Related Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         24           2
 C cysteine            0.7          2           1
 D aspartate           3.5         10           2
 E glutamate           3.8         11           2
 F phenylalanine       1.7          5           1
 G glycine             5.6         16           1
 H histidine           3.5         10           2
 I isoleucine          1.4          4           1
 K lysine              4.9         14           2
 L leucine             8.4         24           1
 M methionine          1.0          3           1
 N asparagine          4.2         12           2
 P proline            12.2         35           3
 Q glutamine           7.3         21           3
 R arginine            4.2         12           2
 S serine             12.5         36           3
 T threonine           4.9         14           1
 V valine              3.5         10           1
 W tryptophan          1.0          3           1
 Y tyrosine            7.3         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   distal-less homeobox 3 
DLX5                  0.407   distal-less homeobox 5 
DLX2                  0.332   distal-less homeobox 2 
DLX6                  0.198   distal-less homeobox 6 
DLX1                  0.195   distal-less homeobox 1 isoform 1 
DLX4                  0.172   distal-less homeobox 4 isoform a 
DLX4                  0.165   distal-less homeobox 4 isoform b 
BARHL1                0.106   BarH-like homeobox 1 
BARX2                 0.099   BarH-like homeobox 2 
MSX2                  0.099   msh homeobox 2 
BSX                   0.094   brain specific homeobox 
MSX1                  0.094   msh homeobox 1 
NKX2-6                0.094   NK2 transcription factor related, locus 6 
BARHL2                0.090   BarH-like homeobox 2 
BARX1                 0.090   BarH-like homeobox 1 
NKX2-5                0.089   NK2 transcription factor related, locus 5 
NKX2-3                0.089   NK2 transcription factor related, locus 3 
HOXA3                 0.089   homeobox A3 isoform b 
HOXA3                 0.089   homeobox A3 isoform a 
HOXA3                 0.089   homeobox A3 isoform a 
RAX                   0.085   retina and anterior neural fold homeobox 
NKX1-1                0.083   PREDICTED: NK1 homeobox 1 
HOXA1                 0.083   homeobox A1 isoform a 
HMX2                  0.082   H6 family homeobox 2 
NKX2-2                0.082   NK2 transcription factor related, locus 2 
NKX1-2                0.082   NK1 homeobox 2 
NKX1-2                0.082   PREDICTED: NK1 homeobox 2 
NKX1-2                0.082   PREDICTED: NK1 homeobox 2 
NKX1-2                0.082   PREDICTED: NK1 homeobox 2 
VAX2                  0.082   ventral anterior homeobox 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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