SEPN1 30539

Name: SEPN1	Sequence: fasta or formatted (590aa)		NCBI GI: 47578099
Description: selenoprotein N, 1 isoform 1 precursor		Referenced in: Selenium Proteins
Other entries for this name: alt prot [556aa] selenoprotein N, 1 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 50 7 C cysteine 1.4 8 1 D aspartate 3.4 20 2 E glutamate 8.1 48 4 F phenylalanine 5.8 34 1 G glycine 5.3 31 1 H histidine 2.5 15 2 I isoleucine 3.9 23 2 K lysine 3.2 19 2 L leucine 11.5 68 2 M methionine 2.4 14 2 N asparagine 2.7 16 2 P proline 8.8 52 4 Q glutamine 4.1 24 2 R arginine 5.1 30 3 S serine 9.7 57 2 T threonine 5.1 30 1 U selenocysteine 0.3 2 1 V valine 4.4 26 2 W tryptophan 1.9 11 2 Y tyrosine 2.0 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 selenoprotein N, 1 isoform 1 precursor SEPN1 0.926 selenoprotein N, 1 isoform 2 precursor ADARB1 0.016 RNA-specific adenosine deaminase B1 isoform 3 ADARB1 0.016 RNA-specific adenosine deaminase B1 isoform 2 SLC39A14 0.013 solute carrier family 39 (zinc transporter), member... BEND2 0.013 BEN domain containing 2 HOXA2 0.012 homeobox A2 LOC100128682 0.012 PREDICTED: hypothetical protein LOC100128682 LOC100128682 0.012 PREDICTED: hypothetical protein LOC100128682 LOC100128682 0.012 PREDICTED: hypothetical protein LOC100128682 CSF2RA 0.012 colony stimulating factor 2 receptor alpha chain is... ZNF283 0.012 zinc finger protein 283 RPP30 0.011 ribonuclease P/MRP 30kDa subunit isoform a ITGB1 0.011 integrin beta 1 isoform 1C-1 precursor ZNF573 0.010 zinc finger protein 573 ADRB1 0.009 beta-1-adrenergic receptor CD55 0.009 decay accelerating factor for complement isoform 2 ... ABR 0.009 active breakpoint cluster region-related protein is... LOC100130360 0.009 PREDICTED: hypothetical protein CPAMD8 0.009 C3 and PZP-like, alpha-2-macroglobulin domain conta... POU3F3 0.009 POU class 3 homeobox 3 LOC100287907 0.008 PREDICTED: hypothetical protein LOC100287907 0.008 PREDICTED: hypothetical protein XP_002343168 COL11A1 0.007 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.007 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.007 alpha 1 type XI collagen isoform A preproprotein [Ho... TAF4 0.007 TBP-associated factor 4 PUF60 0.007 poly-U binding splicing factor 60KDa isoform c [Hom... PUF60 0.007 poly-U binding splicing factor 60KDa isoform b [Homo... PUF60 0.007 poly-U binding splicing factor 60KDa isoform a [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.