Guide to the Human Genome
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Name: CPAMD8 Sequence: fasta or formatted (1932aa) NCBI GI: 118600977
Description:

C3 and PZP-like, alpha-2-macroglobulin domain containing 8

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1        176           3
 C cysteine            1.9         37           2
 D aspartate           4.3         83           4
 E glutamate           6.0        116           3
 F phenylalanine       3.9         75           2
 G glycine             7.9        153           3
 H histidine           2.1         41           2
 I isoleucine          3.4         66           2
 K lysine              3.1         60           2
 L leucine             8.7        168           6
 M methionine          1.8         34           1
 N asparagine          2.3         45           2
 P proline             7.7        148           3
 Q glutamine           4.6         89           4
 R arginine            6.2        120           4
 S serine              8.1        156           4
 T threonine           5.4        105           2
 V valine              8.6        167           3
 W tryptophan          1.8         35           2
 Y tyrosine            3.0         58           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   C3 and PZP-like, alpha-2-macroglobulin domain conta... 
CD109                 0.078   CD109 antigen isoform 3 precursor 
CD109                 0.078   CD109 antigen isoform 1 precursor 
CD109                 0.074   CD109 antigen isoform 2 precursor 
A2M                   0.074   alpha-2-macroglobulin precursor 
PZP                   0.073   pregnancy-zone protein 
A2ML1                 0.071   alpha-2-macroglobulin-like 1 
C4B                   0.054   complement component 4B preproprotein 
LOC100294156          0.054   PREDICTED: similar to C4A protein isoform 1 
C4A                   0.054   complement component 4A preproprotein 
LOC100294156          0.049   PREDICTED: similar to C4A protein isoform 2 
C3                    0.041   complement component 3 precursor 
OVOS2                 0.040   PREDICTED: ovostatin 2 
OVOS                  0.039   PREDICTED: ovostatin 
LOC100293534          0.037   PREDICTED: similar to complement component 4B (Chil...
C5                    0.031   complement component 5 preproprotein 
LOC100133511          0.029   PREDICTED: similar to complement component C3, part...
LOC100133592          0.024   PREDICTED: similar to ovostatin-2 
LOC728735             0.014   PREDICTED: similar to Ovostatin homolog 2 
LOC100292046          0.011   PREDICTED: similar to Complement component 4A (Rodg...
AGRN                  0.009   agrin 
LOC653879             0.008   PREDICTED: similar to complement component 3 
OVOS                  0.008   PREDICTED: ovostatin 
LOC732434             0.007   PREDICTED: similar to Ovostatin homolog 2 
LOC728715             0.005   PREDICTED: similar to hCG38149 
LOC728715             0.005   PREDICTED: hypothetical protein LOC728715 
TMEFF2                0.005   transmembrane protein with EGF-like and two follista...
TMEFF1                0.004   transmembrane protein with EGF-like and two follista...
LOC100134413          0.004   PREDICTED: similar to Ovostatin homolog 2 
FSTL3                 0.004   follistatin-like 3 glycoprotein precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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