Guide to the Human Genome
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Name: SLC39A14 Sequence: fasta or formatted (481aa) NCBI GI: 205830426
Description:

solute carrier family 39 (zinc transporter), member 14 isoform c

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [492aa] solute carrier family 39 (zinc transporter), member 14 isoform b
alt prot [492aa] solute carrier family 39 (zinc transporter), member 14 isoform a
alt prot [492aa] solute carrier family 39 (zinc transporter), member 14 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         36           2
 C cysteine            3.1         15           3
 D aspartate           3.5         17           1
 E glutamate           5.6         27           2
 F phenylalanine       6.2         30           3
 G glycine             7.9         38           2
 H histidine           3.7         18           3
 I isoleucine          4.8         23           1
 K lysine              3.5         17           2
 L leucine            15.0         72           4
 M methionine          2.1         10           2
 N asparagine          3.3         16           1
 P proline             3.1         15           1
 Q glutamine           5.4         26           2
 R arginine            2.1         10           1
 S serine             10.2         49           2
 T threonine           3.7         18           2
 V valine              5.2         25           2
 W tryptophan          1.2          6           1
 Y tyrosine            2.7         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 39 (zinc transporter), member... 
SLC39A14              0.920   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.920   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.878   solute carrier family 39 (zinc transporter), member...
SLC39A8               0.369   solute carrier family 39 (zinc transporter), member ...
SLC39A8               0.369   solute carrier family 39 (zinc transporter), member...
SLC39A8               0.369   solute carrier family 39 (zinc transporter), member...
SLC39A8               0.358   solute carrier family 39 (zinc transporter), member...
SLC39A6               0.187   solute carrier family 39 (zinc transporter), member...
SLC39A6               0.176   solute carrier family 39 (zinc transporter), member...
SLC39A10              0.172   solute carrier family 39 (zinc transporter), member...
SLC39A10              0.172   solute carrier family 39 (zinc transporter), member ...
SLC39A12              0.165   solute carrier family 39 (zinc transporter), member...
SLC39A4               0.160   solute carrier family 39 (zinc transporter), member...
SLC39A4               0.160   solute carrier family 39 (zinc transporter), member...
SLC39A12              0.149   solute carrier family 39 (zinc transporter), member...
SLC39A5               0.110   solute carrier family 39 (metal ion transporter), m...
SLC39A5               0.110   solute carrier family 39 (metal ion transporter), m...
SLC39A7               0.072   solute carrier family 39, member 7 
SLC39A7               0.072   solute carrier family 39, member 7 
SLC39A13              0.054   solute carrier family 39 (zinc transporter), member ...
SLC39A13              0.051   solute carrier family 39 (zinc transporter), member...
C16orf89              0.028   hypothetical protein LOC146556 isoform 1 
ITGB1                 0.024   integrin beta 1 isoform 1C-1 precursor 
RPP30                 0.023   ribonuclease P/MRP 30kDa subunit isoform a 
ZNF573                0.023   zinc finger protein 573 
LOC100128682          0.022   PREDICTED: hypothetical protein LOC100128682 
LOC100128682          0.022   PREDICTED: hypothetical protein LOC100128682 
LOC100128682          0.022   PREDICTED: hypothetical protein LOC100128682 
ZNF283                0.022   zinc finger protein 283 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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