Guide to the Human Genome
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Name: ABR Sequence: fasta or formatted (859aa) NCBI GI: 38679957
Description:

active breakpoint cluster region-related protein isoform a

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [813aa] active breakpoint cluster region-related  protein isoform c
alt prot [822aa] active breakpoint cluster region-related  protein isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         44           2
 C cysteine            1.2         10           1
 D aspartate           5.7         49           3
 E glutamate           8.0         69           2
 F phenylalanine       4.2         36           1
 G glycine             4.7         40           3
 H histidine           2.6         22           1
 I isoleucine          5.2         45           1
 K lysine              8.4         72           3
 L leucine            11.1         95           4
 M methionine          2.4         21           2
 N asparagine          3.5         30           2
 P proline             5.5         47           2
 Q glutamine           4.5         39           2
 R arginine            4.1         35           2
 S serine              7.9         68           2
 T threonine           5.5         47           2
 V valine              6.4         55           2
 W tryptophan          0.8          7           1
 Y tyrosine            3.3         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   active breakpoint cluster region-related  protein is... 
ABR                   0.942   active breakpoint cluster region-related  protein i...
ABR                   0.898   active breakpoint cluster region-related  protein is...
BCR                   0.657   breakpoint cluster region isoform 1 
BCR                   0.604   breakpoint cluster region isoform 2 
ARHGAP27              0.066   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.066   Rho GTPase activating protein 27 isoform a 
SYDE2                 0.065   synapse defective 1, Rho GTPase, homolog 2 
ARHGAP15              0.062   ARHGAP15 
CHN1                  0.060   chimerin (chimaerin) 1 isoform a 
CHN1                  0.060   chimerin (chimaerin) 1 isoform b 
LOC100289600          0.056   PREDICTED: hypothetical protein XP_002343826 
ARHGAP12              0.056   Rho GTPase activating protein 12 
SYDE1                 0.056   synapse defective 1, Rho GTPase, homolog 1 
HMHA1                 0.054   minor histocompatibility antigen HA-1 
ARHGAP30              0.054   Rho GTPase activating protein 30 isoform 2 
ARHGAP30              0.054   Rho GTPase activating protein 30 isoform 1 
ARHGAP9               0.053   Rho GTPase activating protein 9 isoform 1 
ARHGAP9               0.053   Rho GTPase activating protein 9 isoform 3 
ARHGAP21              0.053   Rho GTPase activating protein 21 
CHN2                  0.052   beta chimerin isoform 2 
CHN2                  0.052   beta chimerin isoform 1 
LOC100292941          0.051   PREDICTED: hypothetical protein 
LOC100290826          0.051   PREDICTED: hypothetical protein XP_002348160 
LOC100287161          0.051   PREDICTED: hypothetical protein XP_002343833 
ARHGAP23              0.051   Rho GTPase activating protein 23 
RICS                  0.051   Rho GTPase-activating protein isoform 1 
RICS                  0.051   Rho GTPase-activating protein isoform 2 
ARHGEF17              0.050   Rho guanine nucleotide exchange factor (GEF) 17 [Hom...
SNX26                 0.050   sorting nexin 26 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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