Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: BEND2 Sequence: fasta or formatted (799aa) NCBI GI: 193794843
Description:

BEN domain containing 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         55           2
 C cysteine            2.4         19           1
 D aspartate           5.9         47           2
 E glutamate           5.8         46           2
 F phenylalanine       2.8         22           2
 G glycine             5.1         41           2
 H histidine           2.1         17           2
 I isoleucine          3.9         31           2
 K lysine              3.8         30           2
 L leucine             7.3         58           2
 M methionine          2.5         20           1
 N asparagine          7.0         56           2
 P proline             7.5         60           2
 Q glutamine           4.3         34           2
 R arginine            4.9         39           2
 S serine             12.3         98           5
 T threonine           6.1         49           2
 V valine              5.3         42           2
 W tryptophan          1.1          9           1
 Y tyrosine            3.3         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BEN domain containing 2 
CD55                  0.021   decay accelerating factor for complement isoform 2 ...
UTY                   0.021   tetratricopeptide repeat protein isoform 1 
C16orf89              0.020   hypothetical protein LOC146556 isoform 1 
RPP30                 0.017   ribonuclease P/MRP 30kDa subunit isoform a 
LOC100128682          0.015   PREDICTED: hypothetical protein LOC100128682 
LOC100128682          0.015   PREDICTED: hypothetical protein LOC100128682 
LOC100128682          0.015   PREDICTED: hypothetical protein LOC100128682 
CSF2RA                0.014   colony stimulating factor 2 receptor alpha chain is...
LOC100128260          0.012   PREDICTED: hCG_1742852 
LOC100128260          0.012   PREDICTED: hCG_1742852 
ITGB1                 0.012   integrin beta 1 isoform 1C-1 precursor 
MAP3K15               0.012   mitogen-activated protein kinase kinase kinase 15 [...
SLC39A14              0.012   solute carrier family 39 (zinc transporter), member...
SEPSECS               0.012   Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRN...
PPIL3                 0.012   peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo...
LOC100288773          0.011   PREDICTED: hypothetical protein XP_002343911 
LOC100128260          0.011   PREDICTED: hCG_1742852 
ZNF283                0.011   zinc finger protein 283 
RUNDC2B               0.011   RUN domain containing 2B 
ITGB1                 0.009   integrin beta 1 isoform 1C-2 precursor 
EFCAB5                0.009   EF-hand calcium binding domain 5 isoform b 
SEPN1                 0.009   selenoprotein N, 1 isoform 1 precursor 
ADARB1                0.009   RNA-specific adenosine deaminase B1 isoform 3 
ADARB1                0.009   RNA-specific adenosine deaminase B1 isoform 2 
MUC12                 0.008   PREDICTED: mucin 12 
MUC12                 0.008   PREDICTED: mucin 12 
ZNF573                0.008   zinc finger protein 573 
MUC12                 0.007   PREDICTED: mucin 12 
MOG                   0.007   myelin oligodendrocyte glycoprotein isoform beta4 pr...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press